RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 GNAI1P63096 354 aa12.78□□□□□ -0.36
TP53-225ENST00000619485 SKOR2Q2VWA4 1001 aaPredicted RBP12.78□□□□□ -0.36
TP53-225ENST00000619485 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
TP53-225ENST00000619485 NWD1Q149M9 1564 aa12.78□□□□□ -0.36
TP53-225ENST00000619485 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
TP53-225ENST00000619485 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
TP53-225ENST00000619485 NASPP49321 788 aaPredicted RBP12.77□□□□□ -0.37
TP53-225ENST00000619485 CALD1Q05682 793 aaKnown RBP12.77□□□□□ -0.37
TP53-225ENST00000619485 ANP32BQ92688 251 aaKnown RBP12.77□□□□□ -0.37
TP53-225ENST00000619485 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.37
TP53-225ENST00000619485 STRCP1A6NGW2 1772 aa12.77□□□□□ -0.37
TP53-225ENST00000619485 HOXC9P31274 260 aa12.77□□□□□ -0.37
TP53-225ENST00000619485 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.37
TP53-225ENST00000619485 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
TP53-225ENST00000619485 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
TP53-225ENST00000619485 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
TP53-225ENST00000619485 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
TP53-225ENST00000619485 SMARCA5O60264 1052 aaPredicted RBP12.76□□□□□ -0.37
TP53-225ENST00000619485 BAG4O95429 457 aaKnown RBP12.76□□□□□ -0.37
TP53-225ENST00000619485 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
TP53-225ENST00000619485 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
TP53-225ENST00000619485 IFT57Q9NWB7 429 aa12.76□□□□□ -0.37
TP53-225ENST00000619485 ISY1Q9ULR0 285 aaKnown RBP12.76□□□□□ -0.37
TP53-225ENST00000619485 LTN1O94822 1766 aa12.75□□□□□ -0.37
TP53-225ENST00000619485 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
TP53-225ENST00000619485 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
TP53-225ENST00000619485 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
TP53-225ENST00000619485 ABCC4O15439 1325 aa12.75□□□□□ -0.37
TP53-225ENST00000619485 PKP1Q13835 747 aa12.75□□□□□ -0.37
TP53-225ENST00000619485 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
TP53-225ENST00000619485 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
TP53-225ENST00000619485 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
TP53-225ENST00000619485 FLT4P35916 1363 aa12.74□□□□□ -0.37
TP53-225ENST00000619485 TTC21AQ8NDW8 1320 aa12.74□□□□□ -0.37
TP53-225ENST00000619485 RGL2O15211 777 aa12.74□□□□□ -0.37
TP53-225ENST00000619485 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
TP53-225ENST00000619485 PTMSP20962 102 aa12.73□□□□□ -0.37
TP53-225ENST00000619485 CRB1P82279 1406 aa12.73□□□□□ -0.37
TP53-225ENST00000619485 ADGRL3Q9HAR2 1447 aa12.73□□□□□ -0.37
TP53-225ENST00000619485 G2E3Q7L622 706 aa12.73□□□□□ -0.37
TP53-225ENST00000619485 AK9Q5TCS8 1911 aa12.73□□□□□ -0.37
TP53-225ENST00000619485 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
TP53-225ENST00000619485 HOMEZQ8IX15 550 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 ANKARQ7Z5J8 1434 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 PSME1Q06323 249 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 RABEP1Q15276 862 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
TP53-225ENST00000619485 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.37
TP53-225ENST00000619485 ZGPATQ8N5A5 531 aaKnown RBP12.71□□□□□ -0.37
TP53-225ENST00000619485 NFAT5O94916 1531 aa12.71□□□□□ -0.37
TP53-225ENST00000619485 FGD1P98174 961 aa12.71□□□□□ -0.37
TP53-225ENST00000619485 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
TP53-225ENST00000619485 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
TP53-225ENST00000619485 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.37
TP53-225ENST00000619485 CASC1Q6TDU7 716 aa12.71□□□□□ -0.37
TP53-225ENST00000619485 CABLES1Q8TDN4 633 aa12.71□□□□□ -0.37
TP53-225ENST00000619485 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
TP53-225ENST00000619485 MSNP26038 577 aaKnown RBP12.7□□□□□ -0.38
TP53-225ENST00000619485 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
TP53-225ENST00000619485 RGS12O14924 1447 aa12.7□□□□□ -0.38
TP53-225ENST00000619485 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
TP53-225ENST00000619485 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
TP53-225ENST00000619485 SDSP20132 328 aa12.7□□□□□ -0.38
TP53-225ENST00000619485 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
TP53-225ENST00000619485 NOL8Q76FK4 1167 aaKnown RBP12.7□□□□□ -0.38
TP53-225ENST00000619485 MSH6P52701 1360 aa12.7□□□□□ -0.38
TP53-225ENST00000619485 F6X3S4 739 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 CHL1O00533 1208 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 KCNQ3O43525 872 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 ST18O60284 1047 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 RBM10P98175 930 aaKnown RBP12.69□□□□□ -0.38
TP53-225ENST00000619485 TSHZ3Q63HK5 1081 aa12.69□□□□□ -0.38
TP53-225ENST00000619485 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
TP53-225ENST00000619485 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
TP53-225ENST00000619485 NUCB2P80303 420 aa12.68□□□□□ -0.38
TP53-225ENST00000619485 ZSCAN23Q3MJ62 389 aa12.68□□□□□ -0.38
TP53-225ENST00000619485 MEIS3Q99687 375 aa12.68□□□□□ -0.38
TP53-225ENST00000619485 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
TP53-225ENST00000619485 KDRP35968 1356 aa12.68□□□□□ -0.38
TP53-225ENST00000619485 FOXD4L6Q3SYB3 417 aaPredicted RBP12.68□□□□□ -0.38
TP53-225ENST00000619485 FOXD4L3Q6VB84 417 aaPredicted RBP12.68□□□□□ -0.38
TP53-225ENST00000619485 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
TP53-225ENST00000619485 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
TP53-225ENST00000619485 PXDNQ92626 1479 aa12.67□□□□□ -0.38
TP53-225ENST00000619485 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
TP53-225ENST00000619485 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
TP53-225ENST00000619485 ANKRD44Q8N8A2 993 aa12.66□□□□□ -0.38
TP53-225ENST00000619485 TSPYL4Q9UJ04 414 aa12.66□□□□□ -0.38
TP53-225ENST00000619485 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
TP53-225ENST00000619485 LMBRD1Q9NUN5 540 aa12.66□□□□□ -0.38
TP53-225ENST00000619485 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms