RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ZSCAN23Q3MJ62 389 aa19.38■□□□□ 0.69
SEMA3B-214ENST00000619119 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
SEMA3B-214ENST00000619119 USP31Q70CQ4 1352 aa19.37■□□□□ 0.69
SEMA3B-214ENST00000619119 MCM5P33992 734 aa19.37■□□□□ 0.69
SEMA3B-214ENST00000619119 PSME1Q06323 249 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 LMOD2Q6P5Q4 547 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 ZNF445P59923 1031 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 KIAA2012Q0VF49 1180 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 ORAI2Q96SN7 254 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 KCNJ4P48050 445 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 MCM10Q7L590 875 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 ZFP91Q96JP5 570 aaPredicted RBP19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
SEMA3B-214ENST00000619119 ANKARQ7Z5J8 1434 aa19.35■□□□□ 0.69
SEMA3B-214ENST00000619119 MCTP1Q6DN14 999 aa19.35■□□□□ 0.69
SEMA3B-214ENST00000619119 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
SEMA3B-214ENST00000619119 FOXO3O43524 673 aa19.35■□□□□ 0.69
SEMA3B-214ENST00000619119 U2AF2P26368 475 aaKnown RBP eCLIP19.35■□□□□ 0.691e-14■□□□□ 8.7
SEMA3B-214ENST00000619119 BAG4O95429 457 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 TRIM27P14373 513 aa19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 IRX5P78411 483 aaPredicted RBP19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 PROSER2Q86WR7 435 aaPredicted RBP19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 ZNF142P52746 1687 aaPredicted RBP19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 DZIP1LQ8IYY4 767 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 PDCL2Q8N4E4 241 aa19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 RNF214Q8ND24 703 aa19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 CHD2O14647 1828 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-214ENST00000619119 HSPA2P54652 639 aa19.33■□□□□ 0.69
SEMA3B-214ENST00000619119 RBM27Q9P2N5 1060 aaKnown RBP19.33■□□□□ 0.69
SEMA3B-214ENST00000619119 NALCNQ8IZF0 1738 aa19.33■□□□□ 0.69
SEMA3B-214ENST00000619119 CT47B1P0C2W7 299 aaPredicted RBP19.33■□□□□ 0.68
SEMA3B-214ENST00000619119 GNAI1P63096 354 aa19.33■□□□□ 0.68
SEMA3B-214ENST00000619119 CERS3Q8IU89 383 aa19.33■□□□□ 0.68
SEMA3B-214ENST00000619119 FLT4P35916 1363 aa19.33■□□□□ 0.68
SEMA3B-214ENST00000619119 ITPRIPQ8IWB1 547 aa19.32■□□□□ 0.68
SEMA3B-214ENST00000619119 EYA1Q99502 592 aa19.32■□□□□ 0.68
SEMA3B-214ENST00000619119 KIF3AQ9Y496 699 aa19.32■□□□□ 0.68
SEMA3B-214ENST00000619119 HAP1P54257 671 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-214ENST00000619119 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
SEMA3B-214ENST00000619119 SBNO1A3KN83 1393 aa19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 PIK3C2AO00443 1686 aa19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 CD2BP2O95400 341 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 RWDD1Q9H446 243 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 BCL2L12Q9HB09 334 aa19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 SNX21Q969T3 373 aa19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
SEMA3B-214ENST00000619119 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 KRT24Q2M2I5 525 aa19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 ADGRL3Q9HAR2 1447 aa19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 C17orf53Q8N3J3 647 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 USHBP1Q8N6Y0 703 aa19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 MIS18AQ9NYP9 233 aa19.3■□□□□ 0.68
SEMA3B-214ENST00000619119 HOXC9P31274 260 aa19.29■□□□□ 0.68
SEMA3B-214ENST00000619119 PRIMPOLQ96LW4 560 aa19.29■□□□□ 0.68
SEMA3B-214ENST00000619119 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
SEMA3B-214ENST00000619119 VAMP4O75379 141 aa19.28■□□□□ 0.68
SEMA3B-214ENST00000619119 HMGN5P82970 282 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-214ENST00000619119 MTHFSDQ2M296 383 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-214ENST00000619119 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-214ENST00000619119 TMEM57Q8N5G2 664 aa19.28■□□□□ 0.68
SEMA3B-214ENST00000619119 GAS2L2Q8NHY3 880 aa19.28■□□□□ 0.68
SEMA3B-214ENST00000619119 ZNF853P0CG23 659 aa19.27■□□□□ 0.67
SEMA3B-214ENST00000619119 DLG5Q8TDM6 1919 aa19.26■□□□□ 0.67
SEMA3B-214ENST00000619119 RBM25P49756 843 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-214ENST00000619119 SYCE3A1L190 88 aa19.25■□□□□ 0.67
SEMA3B-214ENST00000619119 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
SEMA3B-214ENST00000619119 KIF16BQ96L93 1317 aa19.25■□□□□ 0.67
SEMA3B-214ENST00000619119 K7ELQ4 463 aaPredicted RBP19.25■□□□□ 0.67
SEMA3B-214ENST00000619119 IRX3P78415 501 aaPredicted RBP19.25■□□□□ 0.67
SEMA3B-214ENST00000619119 RTF1Q92541 710 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-214ENST00000619119 IPO8O15397 1037 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-214ENST00000619119 DDX17Q92841 729 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-214ENST00000619119 GTF2F1P35269 517 aaKnown RBP eCLIP19.23■□□□□ 0.671e-7■□□□□ 9.8
SEMA3B-214ENST00000619119 ALDH1L2Q3SY69 923 aa19.23■□□□□ 0.67
SEMA3B-214ENST00000619119 ARHGEF10O15013 1369 aa19.23■□□□□ 0.67
SEMA3B-214ENST00000619119 LMBRD1Q9NUN5 540 aa19.22■□□□□ 0.67
SEMA3B-214ENST00000619119 IGSF1Q8N6C5 1336 aa19.22■□□□□ 0.67
SEMA3B-214ENST00000619119 PRPF40AO75400 957 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-214ENST00000619119 NOLC1Q14978 699 aaKnown RBP eCLIP19.22■□□□□ 0.67
SEMA3B-214ENST00000619119 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-214ENST00000619119 SECISBP2LQ93073 1101 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-214ENST00000619119 DDX19BQ9UMR2 479 aa19.21■□□□□ 0.67
SEMA3B-214ENST00000619119 AK9Q5TCS8 1911 aa19.2■□□□□ 0.66
SEMA3B-214ENST00000619119 ZBTB9Q96C00 473 aa19.2■□□□□ 0.66
SEMA3B-214ENST00000619119 C19orf44Q9H6X5 657 aa19.2■□□□□ 0.66
SEMA3B-214ENST00000619119 DNAJC2Q99543 621 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-214ENST00000619119 LRSAM1Q6UWE0 723 aa19.19■□□□□ 0.66
SEMA3B-214ENST00000619119 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-214ENST00000619119 KRT28Q7Z3Y7 464 aa19.18■□□□□ 0.66
SEMA3B-214ENST00000619119 GPT2Q8TD30 523 aa19.18■□□□□ 0.66
SEMA3B-214ENST00000619119 TTC12Q9H892 705 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-214ENST00000619119 ATF3P18847 181 aa19.18■□□□□ 0.66
SEMA3B-214ENST00000619119 PIBF1Q8WXW3 757 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms