RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 CACNA1FO60840 1977 aa8.19□□□□□ -1.1
CUL1-204ENST00000617797 USP19O94966 1318 aa8.19□□□□□ -1.1
CUL1-204ENST00000617797 FAM208AQ9UK61 1670 aaKnown RBP8.19□□□□□ -1.1
CUL1-204ENST00000617797 SEC24BO95487 1268 aa8.19□□□□□ -1.1
CUL1-204ENST00000617797 RTF1Q92541 710 aaKnown RBP8.19□□□□□ -1.1
CUL1-204ENST00000617797 TRPM3Q9HCF6 1732 aaPredicted RBP8.18□□□□□ -1.1
CUL1-204ENST00000617797 ESCO1Q5FWF5 840 aa8.18□□□□□ -1.1
CUL1-204ENST00000617797 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
CUL1-204ENST00000617797 KIF1AQ12756 1690 aa8.18□□□□□ -1.1
CUL1-204ENST00000617797 LTV1Q96GA3 475 aaPredicted RBP8.18□□□□□ -1.1
CUL1-204ENST00000617797 C1orf115Q9H7X2 142 aa8.18□□□□□ -1.1
CUL1-204ENST00000617797 CLEC11AQ9Y240 323 aa8.18□□□□□ -1.1
CUL1-204ENST00000617797 RGS12O14924 1447 aa8.17□□□□□ -1.1
CUL1-204ENST00000617797 PSME1Q06323 249 aa8.17□□□□□ -1.1
CUL1-204ENST00000617797 MIS18AQ9NYP9 233 aa8.17□□□□□ -1.1
CUL1-204ENST00000617797 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
CUL1-204ENST00000617797 HTATSF1O43719 755 aaKnown RBP8.17□□□□□ -1.1
CUL1-204ENST00000617797 RGPD5Q99666 1765 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 MSH6P52701 1360 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 SLIT3O75094 1523 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 NUCB1Q02818 461 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 IP6K1Q92551 441 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 STRCP1A6NGW2 1772 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 N4BP2Q86UW6 1770 aaPredicted RBP8.16□□□□□ -1.1
CUL1-204ENST00000617797 MAP3K5Q99683 1374 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 LMO7Q8WWI1 1683 aa8.16□□□□□ -1.1
CUL1-204ENST00000617797 GNAT3A8MTJ3 354 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 SLC4A3P48751 1232 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 INTS3Q68E01 1043 aaKnown RBP8.15□□□□□ -1.1
CUL1-204ENST00000617797 USHBP1Q8N6Y0 703 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 ORAI2Q96SN7 254 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 KDM3BQ7LBC6 1761 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 CHD1LQ86WJ1 897 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 KCNH5Q8NCM2 988 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 GCC1Q96CN9 775 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
CUL1-204ENST00000617797 PTPRCP08575 1304 aa8.15□□□□□ -1.11
CUL1-204ENST00000617797 SEMA3EO15041 775 aa8.14□□□□□ -1.11
CUL1-204ENST00000617797 PROSER2Q86WR7 435 aaPredicted RBP8.14□□□□□ -1.11
CUL1-204ENST00000617797 ALS2Q96Q42 1657 aa8.14□□□□□ -1.11
CUL1-204ENST00000617797 CAMTA1Q9Y6Y1 1673 aa8.14□□□□□ -1.11
CUL1-204ENST00000617797 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
CUL1-204ENST00000617797 MED1Q15648 1581 aaPredicted RBP8.14□□□□□ -1.11
CUL1-204ENST00000617797 XPCQ01831 940 aaPredicted RBP8.13□□□□□ -1.11
CUL1-204ENST00000617797 ANKRD45Q5TZF3 282 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 IL17REQ8NFR9 667 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 UPF2Q9HAU5 1272 aaKnown RBP8.13□□□□□ -1.11
CUL1-204ENST00000617797 ATP10DQ9P241 1426 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 C1orf167Q5SNV9 1468 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
CUL1-204ENST00000617797 E2F4Q16254 413 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 NBPF6Q5VWK0 638 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 G2E3Q7L622 706 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 NBPF4Q96M43 638 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 TBC1D32Q96NH3 1257 aa8.13□□□□□ -1.11
CUL1-204ENST00000617797 TAF7Q15545 349 aaPredicted RBP8.12□□□□□ -1.11
CUL1-204ENST00000617797 GCP02774 474 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
CUL1-204ENST00000617797 KRT28Q7Z3Y7 464 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 ARHGEF25Q86VW2 580 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 ANKRD44Q8N8A2 993 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 LRRC59Q96AG4 307 aaKnown RBP8.11□□□□□ -1.11
CUL1-204ENST00000617797 MFRPQ9BY79 579 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 BABAM1Q9NWV8 329 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 NCAPD2Q15021 1401 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 CEMIPQ8WUJ3 1361 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 ZNF467Q7Z7K2 595 aaPredicted RBP8.11□□□□□ -1.11
CUL1-204ENST00000617797 MEIS3Q99687 375 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 STK31Q9BXU1 1019 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 SIPA1L3O60292 1781 aaPredicted RBP8.11□□□□□ -1.11
CUL1-204ENST00000617797 CRYBG1Q9Y4K1 1723 aa8.11□□□□□ -1.11
CUL1-204ENST00000617797 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
CUL1-204ENST00000617797 F6X3S4 739 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 MFAP1P55081 439 aaKnown RBP8.1□□□□□ -1.11
CUL1-204ENST00000617797 CCDC30Q5VVM6 783 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 C19orf44Q9H6X5 657 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 XIRP1Q702N8 1843 aaKnown RBP8.1□□□□□ -1.11
CUL1-204ENST00000617797 MST1RQ04912 1400 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 ZMYND10O75800 440 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 BMP2KLQ5H9B9 411 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 CEP85Q6P2H3 762 aa8.1□□□□□ -1.11
CUL1-204ENST00000617797 RPAP2Q8IXW5 612 aaPredicted RBP8.1□□□□□ -1.11
CUL1-204ENST00000617797 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
CUL1-204ENST00000617797 PDAP1Q13442 181 aaKnown RBP8.09□□□□□ -1.11
CUL1-204ENST00000617797 BECN1Q14457 450 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 SLC4A10Q6U841 1118 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 NECTIN2Q92692 538 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 C22orf23Q9BZE7 217 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 PXDNQ92626 1479 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 FLIIQ13045 1269 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 ANKRD24Q8TF21 1146 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 LGR6Q9HBX8 967 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 COL18A1P39060 1754 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 TMEM94Q12767 1356 aa8.09□□□□□ -1.11
CUL1-204ENST00000617797 PLEKHO1Q53GL0 409 aaPredicted RBP8.08□□□□□ -1.12
CUL1-204ENST00000617797 AKAP4Q5JQC9 854 aa8.08□□□□□ -1.12
CUL1-204ENST00000617797 ZNF530Q6P9A1 599 aaPredicted RBP8.08□□□□□ -1.12
CUL1-204ENST00000617797 PXDNLA1KZ92 1463 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms