RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 BCL9O00512 1426 aa15.18■□□□□ 0.02
PDPN-211ENST00000617617 HOXB7P09629 217 aa15.17■□□□□ 0.02
PDPN-211ENST00000617617 VAMP4O75379 141 aa15.17■□□□□ 0.02
PDPN-211ENST00000617617 FBXO41Q8TF61 875 aa15.17■□□□□ 0.02
PDPN-211ENST00000617617 NGLY1Q96IV0 654 aa15.17■□□□□ 0.02
PDPN-211ENST00000617617 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
PDPN-211ENST00000617617 SBF2Q86WG5 1849 aa15.16■□□□□ 0.02
PDPN-211ENST00000617617 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
PDPN-211ENST00000617617 MPRIPQ6WCQ1 1025 aa15.16■□□□□ 0.02
PDPN-211ENST00000617617 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
PDPN-211ENST00000617617 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
PDPN-211ENST00000617617 ONECUT3O60422 494 aaPredicted RBP15.15■□□□□ 0.02
PDPN-211ENST00000617617 TEFQ10587 303 aa15.15■□□□□ 0.02
PDPN-211ENST00000617617 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
PDPN-211ENST00000617617 USP21Q9UK80 565 aa15.15■□□□□ 0.02
PDPN-211ENST00000617617 KCPQ6ZWJ8 1503 aa15.14■□□□□ 0.01
PDPN-211ENST00000617617 CHMP4AQ9BY43 222 aa15.14■□□□□ 0.01
PDPN-211ENST00000617617 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
PDPN-211ENST00000617617 C8orf58Q8NAV2 365 aa15.13■□□□□ 0.01
PDPN-211ENST00000617617 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
PDPN-211ENST00000617617 AFF2P51816 1311 aa15.13■□□□□ 0.01
PDPN-211ENST00000617617 EXOC5O00471 708 aa15.12■□□□□ 0.01
PDPN-211ENST00000617617 NEFLP07196 543 aa15.12■□□□□ 0.01
PDPN-211ENST00000617617 EIF4A1P60842 406 aaKnown RBP15.12■□□□□ 0.01
PDPN-211ENST00000617617 MEX3CQ5U5Q3 659 aaKnown RBP15.12■□□□□ 0.01
PDPN-211ENST00000617617 BRWD3Q6RI45 1802 aa15.12■□□□□ 0.01
PDPN-211ENST00000617617 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
PDPN-211ENST00000617617 TRPC5Q9UL62 973 aaPredicted RBP15.12■□□□□ 0.01
PDPN-211ENST00000617617 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
PDPN-211ENST00000617617 ARHGAP45Q92619 1136 aa15.11■□□□□ 0.01
PDPN-211ENST00000617617 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
PDPN-211ENST00000617617 TSPYL6Q8N831 410 aa15.11■□□□□ 0.01
PDPN-211ENST00000617617 RREB1Q92766 1687 aa15.11■□□□□ 0.01
PDPN-211ENST00000617617 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
PDPN-211ENST00000617617 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
PDPN-211ENST00000617617 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
PDPN-211ENST00000617617 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
PDPN-211ENST00000617617 DDB1Q16531 1140 aa15.09■□□□□ 0.01
PDPN-211ENST00000617617 TJP1Q07157 1748 aa15.09■□□□□ 0.01
PDPN-211ENST00000617617 BCAR3O75815 825 aa15.09■□□□□ 0.01
PDPN-211ENST00000617617 MS4A1P11836 297 aa15.08■□□□□ 0.01
PDPN-211ENST00000617617 ZNF790Q6PG37 636 aa15.08■□□□□ 0
PDPN-211ENST00000617617 USP35Q9P2H5 1018 aa15.08■□□□□ 0
PDPN-211ENST00000617617 CABP4P57796 275 aa15.07■□□□□ 0
PDPN-211ENST00000617617 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
PDPN-211ENST00000617617 NFATC2IPQ8NCF5 419 aa15.07■□□□□ 0
PDPN-211ENST00000617617 LY75O60449 1722 aa15.07■□□□□ 0
PDPN-211ENST00000617617 COL5A3P25940 1745 aaPredicted RBP15.07■□□□□ 0
PDPN-211ENST00000617617 BTAF1O14981 1849 aa15.07■□□□□ 0
PDPN-211ENST00000617617 AAMPQ13685 434 aa15.07■□□□□ 0
PDPN-211ENST00000617617 PXDNLA1KZ92 1463 aa15.06■□□□□ 0
PDPN-211ENST00000617617 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
PDPN-211ENST00000617617 SMC4Q9NTJ3 1288 aa15.06■□□□□ 0
PDPN-211ENST00000617617 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
PDPN-211ENST00000617617 PTPRCP08575 1304 aa15.05■□□□□ 0
PDPN-211ENST00000617617 GIGYF1O75420 1035 aaPredicted RBP15.05■□□□□ 0
PDPN-211ENST00000617617 CCDC30Q5VVM6 783 aa15.05■□□□□ 0
PDPN-211ENST00000617617 ZKSCAN2Q63HK3 967 aa15.05■□□□□ 0
PDPN-211ENST00000617617 ZNF772Q68DY9 489 aaPredicted RBP15.05■□□□□ 0
PDPN-211ENST00000617617 MARCH10Q8NA82 808 aaPredicted RBP15.05■□□□□ 0
PDPN-211ENST00000617617 RGS12O14924 1447 aa15.05■□□□□ -0
PDPN-211ENST00000617617 IBTKQ9P2D0 1353 aaPredicted RBP15.04■□□□□ -0
PDPN-211ENST00000617617 FKBP8Q14318 412 aa15.04■□□□□ -0
PDPN-211ENST00000617617 KCNQ3O43525 872 aa15.03■□□□□ -0
PDPN-211ENST00000617617 KRT24Q2M2I5 525 aa15.03■□□□□ -0
PDPN-211ENST00000617617 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
PDPN-211ENST00000617617 CCDC9Q9Y3X0 531 aaKnown RBP15.03■□□□□ -0
PDPN-211ENST00000617617 NUP188Q5SRE5 1749 aa15.03■□□□□ -0
PDPN-211ENST00000617617 ERBB4Q15303 1308 aa15.03■□□□□ -0
PDPN-211ENST00000617617 FAM98CQ17RN3 349 aaKnown RBP15.03■□□□□ -0
PDPN-211ENST00000617617 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
PDPN-211ENST00000617617 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
PDPN-211ENST00000617617 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
PDPN-211ENST00000617617 ABCC4O15439 1325 aa15.02■□□□□ -0
PDPN-211ENST00000617617 RGPD3A6NKT7 1758 aaPredicted RBP15.02□□□□□ -0.01
PDPN-211ENST00000617617 RGPD4Q7Z3J3 1758 aa15.02□□□□□ -0.01
PDPN-211ENST00000617617 NOB1Q9ULX3 412 aaKnown RBP15.02□□□□□ -0.01
PDPN-211ENST00000617617 TTC5Q8N0Z6 440 aa15.01□□□□□ -0.01
PDPN-211ENST00000617617 QTRT2Q9H974 415 aaKnown RBP15.01□□□□□ -0.01
PDPN-211ENST00000617617 TAF1LQ8IZX4 1826 aa15.01□□□□□ -0.01
PDPN-211ENST00000617617 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
PDPN-211ENST00000617617 PIGBQ92521 554 aa15.01□□□□□ -0.01
PDPN-211ENST00000617617 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
PDPN-211ENST00000617617 ARFGEF2Q9Y6D5 1785 aa15□□□□□ -0.01
PDPN-211ENST00000617617 PLIN1O60240 522 aa15□□□□□ -0.01
PDPN-211ENST00000617617 TRIM27P14373 513 aa15□□□□□ -0.01
PDPN-211ENST00000617617 ZNF496Q96IT1 587 aaPredicted RBP14.99□□□□□ -0.01
PDPN-211ENST00000617617 STK31Q9BXU1 1019 aa14.99□□□□□ -0.01
PDPN-211ENST00000617617 ELL2O00472 640 aaPredicted RBP14.99□□□□□ -0.01
PDPN-211ENST00000617617 HDGFL1Q5TGJ6 251 aa14.99□□□□□ -0.01
PDPN-211ENST00000617617 DZIP1LQ8IYY4 767 aaKnown RBP14.99□□□□□ -0.01
PDPN-211ENST00000617617 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
PDPN-211ENST00000617617 PPP4R2Q9NY27 417 aa14.99□□□□□ -0.01
PDPN-211ENST00000617617 RBM6P78332 1123 aaKnown RBP14.98□□□□□ -0.01
PDPN-211ENST00000617617 C20orf194Q5TEA3 1177 aa14.98□□□□□ -0.01
PDPN-211ENST00000617617 TEX13AQ9BXU3 409 aaPredicted RBP14.98□□□□□ -0.01
PDPN-211ENST00000617617 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
PDPN-211ENST00000617617 BCL2L13Q9BXK5 485 aa14.98□□□□□ -0.01
PDPN-211ENST00000617617 DBF4Q9UBU7 674 aaPredicted RBP14.98□□□□□ -0.01
PDPN-211ENST00000617617 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms