RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 TSR2Q969E8 191 aaKnown RBP26.45■■□□□ 1.82
SDHA-220ENST00000617470 DCAF5Q96JK2 942 aa26.45■■□□□ 1.82
SDHA-220ENST00000617470 RNMTO43148 476 aaKnown RBP26.44■■□□□ 1.82
SDHA-220ENST00000617470 KRT27Q7Z3Y8 459 aa26.44■■□□□ 1.82
SDHA-220ENST00000617470 IL17REQ8NFR9 667 aa26.44■■□□□ 1.82
SDHA-220ENST00000617470 RARSP54136 660 aaKnown RBP26.43■■□□□ 1.82
SDHA-220ENST00000617470 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.43■■□□□ 1.82
SDHA-220ENST00000617470 NKX1-1Q15270 411 aaPredicted RBP26.42■■□□□ 1.82
SDHA-220ENST00000617470 KDM6AO15550 1401 aaPredicted RBP26.42■■□□□ 1.82
SDHA-220ENST00000617470 BRWD3Q6RI45 1802 aa26.41■■□□□ 1.82
SDHA-220ENST00000617470 TEFQ10587 303 aa26.4■■□□□ 1.82
SDHA-220ENST00000617470 ACSBG1Q96GR2 724 aa26.39■■□□□ 1.82
SDHA-220ENST00000617470 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
SDHA-220ENST00000617470 SYTL4Q96C24 671 aaPredicted RBP26.38■■□□□ 1.81
SDHA-220ENST00000617470 CABP4P57796 275 aa26.38■■□□□ 1.81
SDHA-220ENST00000617470 EXOSC9Q06265 439 aaKnown RBP26.38■■□□□ 1.81
SDHA-220ENST00000617470 CEMIPQ8WUJ3 1361 aa26.37■■□□□ 1.81
SDHA-220ENST00000617470 CALD1Q05682 793 aaKnown RBP26.37■■□□□ 1.81
SDHA-220ENST00000617470 KAT6BQ8WYB5 2073 aa26.36■■□□□ 1.81
SDHA-220ENST00000617470 ERVV-2B6SEH9 535 aa26.35■■□□□ 1.81
SDHA-220ENST00000617470 NFATC2IPQ8NCF5 419 aa26.35■■□□□ 1.81
SDHA-220ENST00000617470 SCN11AQ9UI33 1791 aa26.35■■□□□ 1.81
SDHA-220ENST00000617470 SLC52A2Q9HAB3 445 aa26.35■■□□□ 1.81
SDHA-220ENST00000617470 CT47B1P0C2W7 299 aaPredicted RBP26.34■■□□□ 1.81
SDHA-220ENST00000617470 PRIM1P49642 420 aaKnown RBP26.34■■□□□ 1.81
SDHA-220ENST00000617470 VIRMAQ69YN4 1812 aaKnown RBP26.34■■□□□ 1.81
SDHA-220ENST00000617470 TMOD3Q9NYL9 352 aa26.33■■□□□ 1.81
SDHA-220ENST00000617470 MIS18AQ9NYP9 233 aa26.33■■□□□ 1.8
SDHA-220ENST00000617470 TOGARAM1Q9Y4F4 1720 aa26.32■■□□□ 1.8
SDHA-220ENST00000617470 TAF7Q15545 349 aaPredicted RBP26.32■■□□□ 1.8
SDHA-220ENST00000617470 FAM196AQ6ZSG2 479 aa26.32■■□□□ 1.8
SDHA-220ENST00000617470 ADAMTS7Q9UKP4 1686 aa26.32■■□□□ 1.8
SDHA-220ENST00000617470 DOT1LQ8TEK3 1739 aa26.32■■□□□ 1.8
SDHA-220ENST00000617470 ZNF853P0CG23 659 aa26.31■■□□□ 1.8
SDHA-220ENST00000617470 BCL2L13Q9BXK5 485 aa26.31■■□□□ 1.8
SDHA-220ENST00000617470 PDE3AQ14432 1141 aa26.31■■□□□ 1.8
SDHA-220ENST00000617470 KCNQ2O43526 872 aa26.3■■□□□ 1.8
SDHA-220ENST00000617470 BTBD11A6QL63 1104 aa26.29■■□□□ 1.8
SDHA-220ENST00000617470 GNAI1P63096 354 aa26.29■■□□□ 1.8
SDHA-220ENST00000617470 IFT57Q9NWB7 429 aa26.29■■□□□ 1.8
SDHA-220ENST00000617470 PIGBQ92521 554 aa26.28■■□□□ 1.8
SDHA-220ENST00000617470 CFAP44Q96MT7 982 aa26.28■■□□□ 1.8
SDHA-220ENST00000617470 TSPYL4Q9UJ04 414 aa26.28■■□□□ 1.8
SDHA-220ENST00000617470 FRAT1Q92837 279 aaPredicted RBP26.27■■□□□ 1.8
SDHA-220ENST00000617470 MRC1P22897 1456 aa26.27■■□□□ 1.8
SDHA-220ENST00000617470 PANK1Q8TE04 598 aa26.26■■□□□ 1.79
SDHA-220ENST00000617470 TNNQ9UQP3 1299 aa26.26■■□□□ 1.79
SDHA-220ENST00000617470 BCL9O00512 1426 aa26.26■■□□□ 1.79
SDHA-220ENST00000617470 SLC39A6Q13433 755 aa26.26■■□□□ 1.79
SDHA-220ENST00000617470 ITGB4P16144 1822 aa26.25■■□□□ 1.79
SDHA-220ENST00000617470 SSH1Q8WYL5 1049 aa26.25■■□□□ 1.79
SDHA-220ENST00000617470 CHL1O00533 1208 aa26.24■■□□□ 1.79
SDHA-220ENST00000617470 CANXP27824 592 aaKnown RBP26.24■■□□□ 1.79
SDHA-220ENST00000617470 PTF1AQ7RTS3 328 aa26.24■■□□□ 1.79
SDHA-220ENST00000617470 MBIPQ9NS73 344 aa26.24■■□□□ 1.79
SDHA-220ENST00000617470 TRIM37O94972 964 aa26.24■■□□□ 1.79
SDHA-220ENST00000617470 EP400Q96L91 3159 aa26.23■■□□□ 1.79
SDHA-220ENST00000617470 RLBP1P12271 317 aa26.23■■□□□ 1.79
SDHA-220ENST00000617470 SIPA1L3O60292 1781 aaPredicted RBP26.22■■□□□ 1.79
SDHA-220ENST00000617470 TTC5Q8N0Z6 440 aa26.22■■□□□ 1.79
SDHA-220ENST00000617470 KCNQ3O43525 872 aa26.21■■□□□ 1.79
SDHA-220ENST00000617470 ASAP1Q9ULH1 1129 aa26.21■■□□□ 1.79
SDHA-220ENST00000617470 ZNF790Q6PG37 636 aa26.2■■□□□ 1.79
SDHA-220ENST00000617470 BCL11BQ9C0K0 894 aaPredicted RBP26.2■■□□□ 1.79
SDHA-220ENST00000617470 SMC4Q9NTJ3 1288 aa26.2■■□□□ 1.79
SDHA-220ENST00000617470 BABAM1Q9NWV8 329 aa26.2■■□□□ 1.79
SDHA-220ENST00000617470 COG6Q9Y2V7 657 aa26.2■■□□□ 1.79
SDHA-220ENST00000617470 NHSQ6T4R5 1651 aa26.2■■□□□ 1.78
SDHA-220ENST00000617470 KDM2BQ8NHM5 1336 aa26.2■■□□□ 1.78
SDHA-220ENST00000617470 SBF2Q86WG5 1849 aa26.19■■□□□ 1.78
SDHA-220ENST00000617470 TSPYL6Q8N831 410 aa26.18■■□□□ 1.78
SDHA-220ENST00000617470 ATG3Q9NT62 314 aa26.18■■□□□ 1.78
SDHA-220ENST00000617470 VAMP4O75379 141 aa26.18■■□□□ 1.78
SDHA-220ENST00000617470 PTCD1O75127 700 aaKnown RBP26.17■■□□□ 1.78
SDHA-220ENST00000617470 ZKSCAN2Q63HK3 967 aa26.16■■□□□ 1.78
SDHA-220ENST00000617470 ALDH1L2Q3SY69 923 aa26.16■■□□□ 1.78
SDHA-220ENST00000617470 RBM42Q9BTD8 480 aaKnown RBP26.15■■□□□ 1.78
SDHA-220ENST00000617470 CLUAP1Q96AJ1 413 aa26.15■■□□□ 1.78
SDHA-220ENST00000617470 KDM3BQ7LBC6 1761 aa26.14■■□□□ 1.78
SDHA-220ENST00000617470 EIF4A1P60842 406 aaKnown RBP26.14■■□□□ 1.77
SDHA-220ENST00000617470 KRT24Q2M2I5 525 aa26.14■■□□□ 1.77
SDHA-220ENST00000617470 C8orf58Q8NAV2 365 aa26.14■■□□□ 1.77
SDHA-220ENST00000617470 ZNF428Q96B54 188 aa26.14■■□□□ 1.77
SDHA-220ENST00000617470 ZNF496Q96IT1 587 aaPredicted RBP26.14■■□□□ 1.77
SDHA-220ENST00000617470 BTAF1O14981 1849 aa26.14■■□□□ 1.77
SDHA-220ENST00000617470 ELL2O00472 640 aaPredicted RBP26.13■■□□□ 1.77
SDHA-220ENST00000617470 SMARCC1Q92922 1105 aaPredicted RBP26.13■■□□□ 1.77
SDHA-220ENST00000617470 TRIM27P14373 513 aa26.13■■□□□ 1.77
SDHA-220ENST00000617470 FMNL2Q96PY5 1086 aa26.13■■□□□ 1.77
SDHA-220ENST00000617470 NOB1Q9ULX3 412 aaKnown RBP26.13■■□□□ 1.77
SDHA-220ENST00000617470 PALLDQ8WX93 1383 aa26.12■■□□□ 1.77
SDHA-220ENST00000617470 BRPF1P55201 1214 aaPredicted RBP26.12■■□□□ 1.77
SDHA-220ENST00000617470 RBM19Q9Y4C8 960 aaKnown RBP26.11■■□□□ 1.77
SDHA-220ENST00000617470 APBA3O96018 575 aa26.11■■□□□ 1.77
SDHA-220ENST00000617470 PAPPAQ13219 1627 aa26.11■■□□□ 1.77
SDHA-220ENST00000617470 ATF7IPQ6VMQ6 1270 aa26.1■■□□□ 1.77
SDHA-220ENST00000617470 DZIP1LQ8IYY4 767 aaKnown RBP26.1■■□□□ 1.77
SDHA-220ENST00000617470 TWISTNBQ3B726 338 aaPredicted RBP26.09■■□□□ 1.77
SDHA-220ENST00000617470 CENPQQ7L2Z9 268 aaPredicted RBP26.09■■□□□ 1.77
SDHA-220ENST00000617470 KIF16BQ96L93 1317 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms