RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 SYT17Q9BSW7 474 aa21.61■■□□□ 1.05
SPTSSB-204ENST00000617024 FHDC1Q9C0D6 1143 aaPredicted RBP21.61■■□□□ 1.05
SPTSSB-204ENST00000617024 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
SPTSSB-204ENST00000617024 RNMTO43148 476 aaKnown RBP21.6■■□□□ 1.05
SPTSSB-204ENST00000617024 HTATSF1O43719 755 aaKnown RBP21.6■■□□□ 1.05
SPTSSB-204ENST00000617024 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
SPTSSB-204ENST00000617024 RIPK4P57078 832 aa21.6■■□□□ 1.05
SPTSSB-204ENST00000617024 LGR6Q9HBX8 967 aa21.6■■□□□ 1.05
SPTSSB-204ENST00000617024 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
SPTSSB-204ENST00000617024 SLC15A2Q16348 729 aa21.59■■□□□ 1.05
SPTSSB-204ENST00000617024 CEP350Q5VT06 3117 aa21.59■■□□□ 1.05
SPTSSB-204ENST00000617024 APAF1O14727 1248 aa21.58■■□□□ 1.05
SPTSSB-204ENST00000617024 CABP4P57796 275 aa21.58■■□□□ 1.05
SPTSSB-204ENST00000617024 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
SPTSSB-204ENST00000617024 STK32BQ9NY57 414 aa21.58■■□□□ 1.05
SPTSSB-204ENST00000617024 PAPPAQ13219 1627 aa21.58■■□□□ 1.04
SPTSSB-204ENST00000617024 NHSQ6T4R5 1651 aa21.57■■□□□ 1.04
SPTSSB-204ENST00000617024 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
SPTSSB-204ENST00000617024 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
SPTSSB-204ENST00000617024 TMOD3Q9NYL9 352 aa21.56■■□□□ 1.04
SPTSSB-204ENST00000617024 KDM6AO15550 1401 aaPredicted RBP21.55■■□□□ 1.04
SPTSSB-204ENST00000617024 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
SPTSSB-204ENST00000617024 NFATC2IPQ8NCF5 419 aa21.55■■□□□ 1.04
SPTSSB-204ENST00000617024 MCM10Q7L590 875 aa21.54■■□□□ 1.04
SPTSSB-204ENST00000617024 PIGBQ92521 554 aa21.54■■□□□ 1.04
SPTSSB-204ENST00000617024 MTFR1LQ9H019 292 aa21.54■■□□□ 1.04
SPTSSB-204ENST00000617024 TEFQ10587 303 aa21.53■■□□□ 1.04
SPTSSB-204ENST00000617024 DCTN1Q14203 1278 aa21.53■■□□□ 1.04
SPTSSB-204ENST00000617024 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
SPTSSB-204ENST00000617024 BTAF1O14981 1849 aa21.52■■□□□ 1.04
SPTSSB-204ENST00000617024 DOT1LQ8TEK3 1739 aa21.52■■□□□ 1.03
SPTSSB-204ENST00000617024 SCN11AQ9UI33 1791 aa21.51■■□□□ 1.03
SPTSSB-204ENST00000617024 SENP3-EIF4A1A0A087X0R7 540 aa21.51■■□□□ 1.03
SPTSSB-204ENST00000617024 DLG5Q8TDM6 1919 aa21.51■■□□□ 1.03
SPTSSB-204ENST00000617024 C1QTNF8P60827 252 aa21.5■■□□□ 1.03
SPTSSB-204ENST00000617024 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
SPTSSB-204ENST00000617024 ITGB4P16144 1822 aa21.5■■□□□ 1.03
SPTSSB-204ENST00000617024 CEMIPQ8WUJ3 1361 aa21.49■■□□□ 1.03
SPTSSB-204ENST00000617024 TOGARAM1Q9Y4F4 1720 aa21.49■■□□□ 1.03
SPTSSB-204ENST00000617024 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
SPTSSB-204ENST00000617024 SMARCC1Q92922 1105 aaPredicted RBP21.48■■□□□ 1.03
SPTSSB-204ENST00000617024 ARXQ96QS3 562 aa21.48■■□□□ 1.03
SPTSSB-204ENST00000617024 TAF7Q15545 349 aaPredicted RBP21.47■■□□□ 1.03
SPTSSB-204ENST00000617024 ZNF827Q17R98 1081 aa21.47■■□□□ 1.03
SPTSSB-204ENST00000617024 THUMPD2Q9BTF0 503 aaKnown RBP21.47■■□□□ 1.03
SPTSSB-204ENST00000617024 VIRMAQ69YN4 1812 aaKnown RBP21.47■■□□□ 1.03
SPTSSB-204ENST00000617024 NGEFQ8N5V2 710 aa21.46■■□□□ 1.03
SPTSSB-204ENST00000617024 ATG3Q9NT62 314 aa21.46■■□□□ 1.03
SPTSSB-204ENST00000617024 ASAP1Q9ULH1 1129 aa21.46■■□□□ 1.03
SPTSSB-204ENST00000617024 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
SPTSSB-204ENST00000617024 ADAMTS7Q9UKP4 1686 aa21.46■■□□□ 1.03
SPTSSB-204ENST00000617024 COL24A1Q17RW2 1714 aa21.46■■□□□ 1.03
SPTSSB-204ENST00000617024 BTBD11A6QL63 1104 aa21.45■■□□□ 1.02
SPTSSB-204ENST00000617024 CCDC27Q2M243 656 aa21.45■■□□□ 1.02
SPTSSB-204ENST00000617024 QSER1Q2KHR3 1735 aa21.44■■□□□ 1.02
SPTSSB-204ENST00000617024 TUBGCP6Q96RT7 1819 aa21.44■■□□□ 1.02
SPTSSB-204ENST00000617024 CALD1Q05682 793 aaKnown RBP21.43■■□□□ 1.02
SPTSSB-204ENST00000617024 LRRC4BQ9NT99 713 aa21.43■■□□□ 1.02
SPTSSB-204ENST00000617024 MRC1P22897 1456 aa21.42■■□□□ 1.02
SPTSSB-204ENST00000617024 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
SPTSSB-204ENST00000617024 WWC1Q8IX03 1113 aa21.42■■□□□ 1.02
SPTSSB-204ENST00000617024 PALLDQ8WX93 1383 aa21.41■■□□□ 1.02
SPTSSB-204ENST00000617024 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
SPTSSB-204ENST00000617024 ZNF790Q6PG37 636 aa21.4■■□□□ 1.02
SPTSSB-204ENST00000617024 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
SPTSSB-204ENST00000617024 BABAM1Q9NWV8 329 aa21.4■■□□□ 1.02
SPTSSB-204ENST00000617024 MIS18AQ9NYP9 233 aa21.4■■□□□ 1.02
SPTSSB-204ENST00000617024 LAS1LQ9Y4W2 734 aaKnown RBP21.4■■□□□ 1.02
SPTSSB-204ENST00000617024 PTCD1O75127 700 aaKnown RBP21.38■■□□□ 1.01
SPTSSB-204ENST00000617024 SLC27A3Q5K4L6 730 aa21.38■■□□□ 1.01
SPTSSB-204ENST00000617024 WDR63Q8IWG1 891 aa21.38■■□□□ 1.01
SPTSSB-204ENST00000617024 LOC102724428A0A0B4J2F2 783 aa21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 KCNQ3O43525 872 aa21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 HMGB2P26583 209 aaKnown RBP21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 SIK1P57059 783 aa21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 GPR162Q16538 588 aa21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 AKT1S1Q96B36 256 aa21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 CFAP44Q96MT7 982 aa21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 TSPYL4Q9UJ04 414 aa21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 CCNL1Q9UK58 526 aaPredicted RBP21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 SIPA1L3O60292 1781 aaPredicted RBP21.37■■□□□ 1.01
SPTSSB-204ENST00000617024 CHL1O00533 1208 aa21.36■■□□□ 1.01
SPTSSB-204ENST00000617024 GNAI1P63096 354 aa21.36■■□□□ 1.01
SPTSSB-204ENST00000617024 ATP6V1AP38606 617 aa21.35■■□□□ 1.01
SPTSSB-204ENST00000617024 IFT57Q9NWB7 429 aa21.35■■□□□ 1.01
SPTSSB-204ENST00000617024 KCNQ4P56696 695 aa21.34■■□□□ 1.01
SPTSSB-204ENST00000617024 FMNL2Q96PY5 1086 aa21.34■■□□□ 1.01
SPTSSB-204ENST00000617024 IL16Q14005 1332 aa21.33■■□□□ 1.01
SPTSSB-204ENST00000617024 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
SPTSSB-204ENST00000617024 GIGYF1O75420 1035 aaPredicted RBP21.33■■□□□ 1.01
SPTSSB-204ENST00000617024 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
SPTSSB-204ENST00000617024 HNRNPUQ00839 825 aaKnown RBP eCLIP21.33■■□□□ 1.01
SPTSSB-204ENST00000617024 NLGN2Q8NFZ4 835 aa21.33■■□□□ 1.01
SPTSSB-204ENST00000617024 ZNF496Q96IT1 587 aaPredicted RBP21.33■■□□□ 1.01
SPTSSB-204ENST00000617024 LY75O60449 1722 aa21.32■■□□□ 1
SPTSSB-204ENST00000617024 IFFO2Q5TF58 517 aa21.32■■□□□ 1
SPTSSB-204ENST00000617024 VSIG10Q8N0Z9 540 aa21.32■■□□□ 1
SPTSSB-204ENST00000617024 KLHL34Q8N239 644 aa21.32■■□□□ 1
SPTSSB-204ENST00000617024 SLC4A9Q96Q91 983 aa21.32■■□□□ 1
SPTSSB-204ENST00000617024 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms