RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 BRPF3Q9ULD4 1205 aa20.78■□□□□ 0.92
ATXN2-227ENST00000616825 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
ATXN2-227ENST00000616825 PIBF1Q8WXW3 757 aa20.78■□□□□ 0.92
ATXN2-227ENST00000616825 NAPBQ9H115 298 aa20.77■□□□□ 0.92
ATXN2-227ENST00000616825 SMTNL1A8MU46 457 aa20.77■□□□□ 0.92
ATXN2-227ENST00000616825 DBF4Q9UBU7 674 aaPredicted RBP20.77■□□□□ 0.92
ATXN2-227ENST00000616825 CEP131Q9UPN4 1083 aa20.77■□□□□ 0.92
ATXN2-227ENST00000616825 KIAA0586Q9BVV6 1533 aa20.77■□□□□ 0.92
ATXN2-227ENST00000616825 FAM177A1Q8N128 213 aaPredicted RBP20.77■□□□□ 0.91
ATXN2-227ENST00000616825 MINDY4BA8MYZ0 360 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 ZPR1O75312 459 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 DNAAF4Q8WXU2 420 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 MYD88Q99836 296 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 MAP3K11Q16584 847 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 HSP90AB3PQ58FF7 597 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 PRPF40BQ6NWY9 871 aaKnown RBP20.76■□□□□ 0.91
ATXN2-227ENST00000616825 MKNK2Q9HBH9 465 aa20.76■□□□□ 0.91
ATXN2-227ENST00000616825 GOLGA6L10A6NI86 522 aa20.75■□□□□ 0.91
ATXN2-227ENST00000616825 TSPYL1Q9H0U9 437 aa20.75■□□□□ 0.91
ATXN2-227ENST00000616825 EMILIN1Q9Y6C2 1016 aa20.75■□□□□ 0.91
ATXN2-227ENST00000616825 MAP3K12Q12852 859 aa20.75■□□□□ 0.91
ATXN2-227ENST00000616825 AMOTL2Q9Y2J4 779 aa20.75■□□□□ 0.91
ATXN2-227ENST00000616825 EIF5P55010 431 aaKnown RBP20.75■□□□□ 0.91
ATXN2-227ENST00000616825 IDI1Q13907 227 aa20.75■□□□□ 0.91
ATXN2-227ENST00000616825 SCAND2PQ9GZW5 306 aaPredicted RBP20.75■□□□□ 0.91
ATXN2-227ENST00000616825 MPHOSPH10O00566 681 aaKnown RBP20.74■□□□□ 0.91
ATXN2-227ENST00000616825 ERLIN1O75477 346 aa20.74■□□□□ 0.91
ATXN2-227ENST00000616825 CCDC83Q8IWF9 413 aa20.74■□□□□ 0.91
ATXN2-227ENST00000616825 POLR3DP05423 398 aaPredicted RBP20.74■□□□□ 0.91
ATXN2-227ENST00000616825 WASLO00401 505 aaPredicted RBP20.73■□□□□ 0.91
ATXN2-227ENST00000616825 F6X3S4 739 aa20.73■□□□□ 0.91
ATXN2-227ENST00000616825 CTCFLQ8NI51 663 aaPredicted RBP20.73■□□□□ 0.91
ATXN2-227ENST00000616825 HECW1Q76N89 1606 aa20.73■□□□□ 0.91
ATXN2-227ENST00000616825 CFAP100Q494V2 611 aa20.73■□□□□ 0.91
ATXN2-227ENST00000616825 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
ATXN2-227ENST00000616825 USHBP1Q8N6Y0 703 aa20.73■□□□□ 0.91
ATXN2-227ENST00000616825 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
ATXN2-227ENST00000616825 TRMT112Q9UI30 125 aaKnown RBP20.73■□□□□ 0.91
ATXN2-227ENST00000616825 CCDC141Q6ZP82 1450 aa20.73■□□□□ 0.91
ATXN2-227ENST00000616825 SMARCA5O60264 1052 aaPredicted RBP20.73■□□□□ 0.91
ATXN2-227ENST00000616825 HYPKQ9NX55 129 aa20.72■□□□□ 0.91
ATXN2-227ENST00000616825 A0A087WZG4 1122 aa20.72■□□□□ 0.91
ATXN2-227ENST00000616825 IQCA1Q86XH1 822 aa20.72■□□□□ 0.91
ATXN2-227ENST00000616825 CRACR2BQ8N4Y2 399 aaPredicted RBP20.72■□□□□ 0.91
ATXN2-227ENST00000616825 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
ATXN2-227ENST00000616825 CD109Q6YHK3 1445 aa20.72■□□□□ 0.91
ATXN2-227ENST00000616825 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
ATXN2-227ENST00000616825 EPRSP07814 1512 aaKnown RBP20.71■□□□□ 0.91
ATXN2-227ENST00000616825 CCDC66A2RUB6 948 aa20.71■□□□□ 0.91
ATXN2-227ENST00000616825 EPB41L2O43491 1005 aaKnown RBP20.71■□□□□ 0.91
ATXN2-227ENST00000616825 SEC63Q9UGP8 760 aaKnown RBP20.71■□□□□ 0.91
ATXN2-227ENST00000616825 ARHGAP29Q52LW3 1261 aa20.71■□□□□ 0.91
ATXN2-227ENST00000616825 LEKR1Q6ZMV7 388 aa20.71■□□□□ 0.91
ATXN2-227ENST00000616825 CCDC8Q9H0W5 538 aaPredicted RBP20.71■□□□□ 0.91
ATXN2-227ENST00000616825 DZIP1Q86YF9 867 aaKnown RBP20.7■□□□□ 0.9
ATXN2-227ENST00000616825 SEPT11Q9NVA2 429 aaKnown RBP20.7■□□□□ 0.9
ATXN2-227ENST00000616825 C8orf76Q96K31 380 aa20.7■□□□□ 0.9
ATXN2-227ENST00000616825 LRRFIP2Q9Y608 721 aaKnown RBP20.7■□□□□ 0.9
ATXN2-227ENST00000616825 PPP1R12BO60237 982 aaPredicted RBP20.7■□□□□ 0.9
ATXN2-227ENST00000616825 SEPT7Q16181 437 aaKnown RBP20.69■□□□□ 0.9
ATXN2-227ENST00000616825 ESPNB1AK53 854 aa20.69■□□□□ 0.9
ATXN2-227ENST00000616825 ZRSR2Q15696 482 aaKnown RBP20.69■□□□□ 0.9
ATXN2-227ENST00000616825 FLIIQ13045 1269 aa20.69■□□□□ 0.9
ATXN2-227ENST00000616825 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
ATXN2-227ENST00000616825 ANKIB1Q9P2G1 1089 aa20.68■□□□□ 0.9
ATXN2-227ENST00000616825 ADGRF5Q8IZF2 1346 aa20.68■□□□□ 0.9
ATXN2-227ENST00000616825 ZNF213O14771 459 aa20.68■□□□□ 0.9
ATXN2-227ENST00000616825 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
ATXN2-227ENST00000616825 SLC5A1P13866 664 aa20.68■□□□□ 0.9
ATXN2-227ENST00000616825 IQCEQ6IPM2 695 aa20.68■□□□□ 0.9
ATXN2-227ENST00000616825 ZNF444Q8N0Y2 327 aaPredicted RBP20.68■□□□□ 0.9
ATXN2-227ENST00000616825 EXOC5O00471 708 aa20.67■□□□□ 0.9
ATXN2-227ENST00000616825 DESP17661 470 aa20.67■□□□□ 0.9
ATXN2-227ENST00000616825 ANKRD18BA2A2Z9 1011 aa20.67■□□□□ 0.9
ATXN2-227ENST00000616825 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
ATXN2-227ENST00000616825 ADAMTS2O95450 1211 aa20.67■□□□□ 0.9
ATXN2-227ENST00000616825 ANKRD18AQ8IVF6 992 aa20.67■□□□□ 0.9
ATXN2-227ENST00000616825 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
ATXN2-227ENST00000616825 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
ATXN2-227ENST00000616825 ECHDC1Q9NTX5 307 aa20.67■□□□□ 0.9
ATXN2-227ENST00000616825 MAGI1Q96QZ7 1491 aaPredicted RBP20.67■□□□□ 0.9
ATXN2-227ENST00000616825 SFPQP23246 707 aaKnown RBP eCLIP20.66■□□□□ 0.91e-6■□□□□ 10.6
ATXN2-227ENST00000616825 TNIP1Q15025 636 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 CCDC82Q8N4S0 544 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 TAF4BQ92750 862 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 PKNOX2Q96KN3 472 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 SYCE3A1L190 88 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 RAB34Q9BZG1 259 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 LIMCH1Q9UPQ0 1083 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 C20orf194Q5TEA3 1177 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 ANO10Q9NW15 660 aa20.66■□□□□ 0.9
ATXN2-227ENST00000616825 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
ATXN2-227ENST00000616825 KIAA1328Q86T90 577 aa20.65■□□□□ 0.9
ATXN2-227ENST00000616825 UBE2Q2Q8WVN8 375 aa20.65■□□□□ 0.9
ATXN2-227ENST00000616825 PTPRCP08575 1304 aa20.65■□□□□ 0.9
ATXN2-227ENST00000616825 TEX13AQ9BXU3 409 aaPredicted RBP20.65■□□□□ 0.9
ATXN2-227ENST00000616825 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
ATXN2-227ENST00000616825 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
ATXN2-227ENST00000616825 TRIM27P14373 513 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms