RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 CEMIPQ8WUJ3 1361 aa42.15■■■■■ 4.34
FMR1-216ENST00000616614 MCM10Q7L590 875 aa42.14■■■■■ 4.34
FMR1-216ENST00000616614 NUP188Q5SRE5 1749 aa42.13■■■■■ 4.34
FMR1-216ENST00000616614 SMARCC1Q92922 1105 aaPredicted RBP42.13■■■■■ 4.34
FMR1-216ENST00000616614 HTATSF1O43719 755 aaKnown RBP42.1■■■■■ 4.33
FMR1-216ENST00000616614 TMPOP42166 694 aaKnown RBP42.1■■■■■ 4.33
FMR1-216ENST00000616614 SLC27A3Q5K4L6 730 aa42.1■■■■■ 4.33
FMR1-216ENST00000616614 RTF1Q92541 710 aaKnown RBP42.1■■■■■ 4.33
FMR1-216ENST00000616614 ANO8Q9HCE9 1232 aaPredicted RBP42.09■■■■■ 4.33
FMR1-216ENST00000616614 CCNL1Q9UK58 526 aaPredicted RBP42.09■■■■■ 4.33
FMR1-216ENST00000616614 RRP7AQ9Y3A4 280 aaKnown RBP42.09■■■■■ 4.33
FMR1-216ENST00000616614 LY75O60449 1722 aa42.09■■■■■ 4.33
FMR1-216ENST00000616614 RIPK4P57078 832 aa42.06■■■■■ 4.32
FMR1-216ENST00000616614 TEFQ10587 303 aa42.05■■■■■ 4.32
FMR1-216ENST00000616614 SLC39A6Q13433 755 aa42.04■■■■■ 4.32
FMR1-216ENST00000616614 VIRMAQ69YN4 1812 aaKnown RBP42.04■■■■■ 4.32
FMR1-216ENST00000616614 LOC102724428A0A0B4J2F2 783 aa42.03■■■■■ 4.32
FMR1-216ENST00000616614 SIK1P57059 783 aa42.03■■■■■ 4.32
FMR1-216ENST00000616614 SLC4A9Q96Q91 983 aa42.03■■■■■ 4.32
FMR1-216ENST00000616614 THUMPD2Q9BTF0 503 aaKnown RBP42.03■■■■■ 4.32
FMR1-216ENST00000616614 NEUROD2Q15784 382 aa42.01■■■■■ 4.32
FMR1-216ENST00000616614 NBPF14Q5TI25 921 aa42.01■■■■■ 4.32
FMR1-216ENST00000616614 PSDA5PKW4 1024 aaPredicted RBP42■■■■■ 4.31
FMR1-216ENST00000616614 APAF1O14727 1248 aa42■■■■■ 4.31
FMR1-216ENST00000616614 R3HDM1Q15032 1099 aaKnown RBP42■■■■■ 4.31
FMR1-216ENST00000616614 PAPPAQ13219 1627 aa42■■■■■ 4.31
FMR1-216ENST00000616614 DLG5Q8TDM6 1919 aa41.99■■■■■ 4.31
FMR1-216ENST00000616614 PTCD1O75127 700 aaKnown RBP41.98■■■■■ 4.31
FMR1-216ENST00000616614 RBM42Q9BTD8 480 aaKnown RBP41.98■■■■■ 4.31
FMR1-216ENST00000616614 ITPK1Q13572 414 aa41.97■■■■■ 4.31
FMR1-216ENST00000616614 ZNF827Q17R98 1081 aa41.97■■■■■ 4.31
FMR1-216ENST00000616614 MIER1Q8N108 512 aa41.97■■■■■ 4.31
FMR1-216ENST00000616614 TRIM35Q9UPQ4 493 aa41.96■■■■■ 4.31
FMR1-216ENST00000616614 FAM9BQ8IZU0 186 aa41.95■■■■■ 4.31
FMR1-216ENST00000616614 ATP6V1AP38606 617 aa41.95■■■■■ 4.31
FMR1-216ENST00000616614 AKT1S1Q96B36 256 aa41.95■■■■■ 4.31
FMR1-216ENST00000616614 SIPA1L3O60292 1781 aaPredicted RBP41.94■■■■■ 4.3
FMR1-216ENST00000616614 CCER2I3L3R5 266 aa41.94■■■■■ 4.3
FMR1-216ENST00000616614 SLC15A2Q16348 729 aa41.94■■■■■ 4.3
FMR1-216ENST00000616614 KCNQ3O43525 872 aa41.93■■■■■ 4.3
FMR1-216ENST00000616614 SENP3-EIF4A1A0A087X0R7 540 aa41.92■■■■■ 4.3
FMR1-216ENST00000616614 BTBD11A6QL63 1104 aa41.92■■■■■ 4.3
FMR1-216ENST00000616614 STK32BQ9NY57 414 aa41.92■■■■■ 4.3
FMR1-216ENST00000616614 ZNF790Q6PG37 636 aa41.91■■■■■ 4.3
FMR1-216ENST00000616614 LINC00116Q8NCU8 138 aa41.91■■■■■ 4.3
FMR1-216ENST00000616614 TAF7Q15545 349 aaPredicted RBP41.9■■■■■ 4.3
FMR1-216ENST00000616614 KCPQ6ZWJ8 1503 aa41.9■■■■■ 4.3
FMR1-216ENST00000616614 MIS18AQ9NYP9 233 aa41.89■■■■■ 4.3
FMR1-216ENST00000616614 LMOD3Q0VAK6 560 aa41.87■■■■■ 4.29
FMR1-216ENST00000616614 TTC5Q8N0Z6 440 aa41.85■■■■■ 4.29
FMR1-216ENST00000616614 ZNF496Q96IT1 587 aaPredicted RBP41.85■■■■■ 4.29
FMR1-216ENST00000616614 PDGFDQ9GZP0 370 aaPredicted RBP41.85■■■■■ 4.29
FMR1-216ENST00000616614 C5P01031 1676 aa41.84■■■■■ 4.29
FMR1-216ENST00000616614 TAF1LQ8IZX4 1826 aa41.81■■■■■ 4.28
FMR1-216ENST00000616614 ZNF831Q5JPB2 1677 aa41.8■■■■■ 4.28
FMR1-216ENST00000616614 UBR2Q8IWV8 1755 aa41.79■■■■■ 4.28
FMR1-216ENST00000616614 AMIGO3Q86WK7 504 aa41.79■■■■■ 4.28
FMR1-216ENST00000616614 DNAJC10Q8IXB1 793 aa41.79■■■■■ 4.28
FMR1-216ENST00000616614 TFCP2L1Q9NZI6 479 aa41.78■■■■■ 4.28
FMR1-216ENST00000616614 C4BP0C0L5 1744 aa41.78■■■■■ 4.28
FMR1-216ENST00000616614 SMIM5Q71RC9 77 aa41.77■■■■■ 4.28
FMR1-216ENST00000616614 VSIG10Q8N0Z9 540 aa41.77■■■■■ 4.28
FMR1-216ENST00000616614 HEG1Q9ULI3 1381 aa41.76■■■■■ 4.28
FMR1-216ENST00000616614 TJP1Q07157 1748 aa41.75■■■■■ 4.27
FMR1-216ENST00000616614 PNPLA7Q6ZV29 1317 aa41.75■■■■■ 4.27
FMR1-216ENST00000616614 FMNL2Q96PY5 1086 aa41.75■■■■■ 4.27
FMR1-216ENST00000616614 HMGB2P26583 209 aaKnown RBP41.73■■■■■ 4.27
FMR1-216ENST00000616614 AK7Q96M32 723 aa41.73■■■■■ 4.27
FMR1-216ENST00000616614 CICQ96RK0 1608 aaPredicted RBP41.71■■■■■ 4.27
FMR1-216ENST00000616614 CYP19A1P11511 503 aaPredicted RBP41.7■■■■■ 4.27
FMR1-216ENST00000616614 CNTNAP4Q9C0A0 1308 aa41.7■■■■■ 4.27
FMR1-216ENST00000616614 COL5A3P25940 1745 aaPredicted RBP41.7■■■■■ 4.27
FMR1-216ENST00000616614 PRAMEF22A3QJZ6 481 aa41.69■■■■■ 4.27
FMR1-216ENST00000616614 RC3H1Q5TC82 1133 aaKnown RBP41.69■■■■■ 4.27
FMR1-216ENST00000616614 TSPYL4Q9UJ04 414 aa41.69■■■■■ 4.27
FMR1-216ENST00000616614 CRKLP46109 303 aaKnown RBP41.69■■■■■ 4.26
FMR1-216ENST00000616614 CCDC27Q2M243 656 aa41.69■■■■■ 4.26
FMR1-216ENST00000616614 INTS5Q6P9B9 1019 aaKnown RBP41.69■■■■■ 4.26
FMR1-216ENST00000616614 CHL1O00533 1208 aa41.68■■■■■ 4.26
FMR1-216ENST00000616614 GNPATO15228 680 aa41.68■■■■■ 4.26
FMR1-216ENST00000616614 EIF4A1P60842 406 aaKnown RBP41.68■■■■■ 4.26
FMR1-216ENST00000616614 SALL2Q9Y467 1007 aaPredicted RBP41.68■■■■■ 4.26
FMR1-216ENST00000616614 COL23A1Q86Y22 540 aaPredicted RBP41.67■■■■■ 4.26
FMR1-216ENST00000616614 WWC1Q8IX03 1113 aa41.67■■■■■ 4.26
FMR1-216ENST00000616614 TUBGCP6Q96RT7 1819 aa41.66■■■■■ 4.26
FMR1-216ENST00000616614 KDM3BQ7LBC6 1761 aa41.66■■■■■ 4.26
FMR1-216ENST00000616614 BABAM1Q9NWV8 329 aa41.66■■■■■ 4.26
FMR1-216ENST00000616614 LAS1LQ9Y4W2 734 aaKnown RBP41.66■■■■■ 4.26
FMR1-216ENST00000616614 NCBP3Q53F19 620 aaKnown RBP41.65■■■■■ 4.26
FMR1-216ENST00000616614 CASZ1Q86V15 1759 aa41.65■■■■■ 4.26
FMR1-216ENST00000616614 PHF14O94880 888 aa41.63■■■■■ 4.26
FMR1-216ENST00000616614 USP16Q9Y5T5 823 aa41.63■■■■■ 4.26
FMR1-216ENST00000616614 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP41.62■■■■■ 4.25
FMR1-216ENST00000616614 SNRPA1P09661 255 aaKnown RBP41.62■■■■■ 4.25
FMR1-216ENST00000616614 ZNF853P0CG23 659 aa41.61■■■■■ 4.25
FMR1-216ENST00000616614 CFAP44Q96MT7 982 aa41.61■■■■■ 4.25
FMR1-216ENST00000616614 RPS6KA4O75676 772 aa41.61■■■■■ 4.25
FMR1-216ENST00000616614 CCDC87Q9NVE4 849 aa41.61■■■■■ 4.25
FMR1-216ENST00000616614 MYH14Q7Z406 1995 aaKnown RBP41.6■■■■■ 4.25
FMR1-216ENST00000616614 ZBTB7AO95365 584 aa41.6■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms