RNA–Protein interactions for RNA: ENST00000615597.1

TMEM106C-222, Transcript of transmembrane protein 106C, human

TSL 2

Gene TMEM106C, Length 685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM106C-222	ENST00000615597	LTV1	Q96GA3	475 aa	Predicted RBP	10.35	□□□□□ -0.75
TMEM106C-222	ENST00000615597	EMILIN1	Q9Y6C2	1016 aa		10.35	□□□□□ -0.75
TMEM106C-222	ENST00000615597	ADCY9	O60503	1353 aa		10.35	□□□□□ -0.75
TMEM106C-222	ENST00000615597	KIF7	Q2M1P5	1343 aa		10.34	□□□□□ -0.75
TMEM106C-222	ENST00000615597	PER1	O15534	1290 aa	Predicted RBP	10.34	□□□□□ -0.75
TMEM106C-222	ENST00000615597	GRIN3B	O60391	1043 aa		10.34	□□□□□ -0.75
TMEM106C-222	ENST00000615597	TXNRD1	Q16881	649 aa		10.34	□□□□□ -0.75
TMEM106C-222	ENST00000615597	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
TMEM106C-222	ENST00000615597	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.33	□□□□□ -0.76
TMEM106C-222	ENST00000615597	RAPGEF4	Q8WZA2	1011 aa		10.33	□□□□□ -0.76
TMEM106C-222	ENST00000615597	NKX1-1	Q15270	411 aa	Predicted RBP	10.32	□□□□□ -0.76
TMEM106C-222	ENST00000615597	BTAF1	O14981	1849 aa		10.32	□□□□□ -0.76
TMEM106C-222	ENST00000615597	PKD1L3	Q7Z443	1732 aa		10.32	□□□□□ -0.76
TMEM106C-222	ENST00000615597	PAPPA	Q13219	1627 aa		10.32	□□□□□ -0.76
TMEM106C-222	ENST00000615597	NPC1L1	Q9UHC9	1359 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	KAT6B	Q8WYB5	2073 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	TAT	P17735	454 aa	Predicted RBP	10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	SLC27A3	Q5K4L6	730 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	DDX54	Q8TDD1	881 aa	Known RBP	10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	ACSBG1	Q96GR2	724 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	EYA1	Q99502	592 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	KNSTRN	Q9Y448	316 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	IGSF1	Q8N6C5	1336 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	PCDH11X	Q9BZA7	1347 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	PCDH11Y	Q9BZA8	1340 aa		10.31	□□□□□ -0.76
TMEM106C-222	ENST00000615597	EIF4A2	Q14240	407 aa	Known RBP	10.3	□□□□□ -0.76
TMEM106C-222	ENST00000615597	USHBP1	Q8N6Y0	703 aa		10.3	□□□□□ -0.76
TMEM106C-222	ENST00000615597	POLR3GL	Q9BT43	218 aa		10.3	□□□□□ -0.76
TMEM106C-222	ENST00000615597	C19orf67	A6NJJ6	358 aa		10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	CYP27B1	O15528	508 aa		10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	TOMM70	O94826	608 aa		10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	PRIM1	P49642	420 aa	Known RBP	10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	EVX2	Q03828	476 aa		10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	CHADL	Q6NUI6	762 aa		10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	LRRC4B	Q9NT99	713 aa		10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	LY75	O60449	1722 aa		10.29	□□□□□ -0.76
TMEM106C-222	ENST00000615597	DOT1L	Q8TEK3	1739 aa		10.28	□□□□□ -0.76
TMEM106C-222	ENST00000615597	PPM1G	O15355	546 aa	Predicted RBP	10.28	□□□□□ -0.76
TMEM106C-222	ENST00000615597	HMGB2	P26583	209 aa	Known RBP	10.28	□□□□□ -0.76
TMEM106C-222	ENST00000615597	KDR	P35968	1356 aa		10.27	□□□□□ -0.76
TMEM106C-222	ENST00000615597	MORC1	Q86VD1	984 aa		10.27	□□□□□ -0.77
TMEM106C-222	ENST00000615597	SPG7	Q9UQ90	795 aa		10.27	□□□□□ -0.77
TMEM106C-222	ENST00000615597	QSER1	Q2KHR3	1735 aa		10.27	□□□□□ -0.77
TMEM106C-222	ENST00000615597	MLLT1	Q03111	559 aa	Predicted RBP	10.26	□□□□□ -0.77
TMEM106C-222	ENST00000615597	POLD1	P28340	1107 aa		10.25	□□□□□ -0.77
TMEM106C-222	ENST00000615597	IL13	P35225	146 aa		10.25	□□□□□ -0.77
TMEM106C-222	ENST00000615597	TNNT2	P45379	298 aa	Predicted RBP	10.25	□□□□□ -0.77
TMEM106C-222	ENST00000615597	TOGARAM1	Q9Y4F4	1720 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	ITGB4	P16144	1822 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	PHKG2	P15735	406 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	AMOT	Q4VCS5	1084 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	IFNL2	Q8IZJ0	200 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	SLC16A10	Q8TF71	515 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	NMRK2	Q9NPI5	230 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	COL24A1	Q17RW2	1714 aa		10.24	□□□□□ -0.77
TMEM106C-222	ENST00000615597	ZNF827	Q17R98	1081 aa		10.23	□□□□□ -0.77
TMEM106C-222	ENST00000615597	SMARCC1	Q92922	1105 aa	Predicted RBP	10.23	□□□□□ -0.77
TMEM106C-222	ENST00000615597	SYTL4	Q96C24	671 aa	Predicted RBP	10.23	□□□□□ -0.77
TMEM106C-222	ENST00000615597	ERVV-2	B6SEH9	535 aa		10.22	□□□□□ -0.77
TMEM106C-222	ENST00000615597	HSP90AB1	P08238	724 aa	Known RBP	10.22	□□□□□ -0.77
TMEM106C-222	ENST00000615597	MTHFS	P49914	203 aa		10.22	□□□□□ -0.77
TMEM106C-222	ENST00000615597	PIGB	Q92521	554 aa		10.22	□□□□□ -0.77
TMEM106C-222	ENST00000615597	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.21	□□□□□ -0.77
TMEM106C-222	ENST00000615597	DCAF5	Q96JK2	942 aa		10.21	□□□□□ -0.77
TMEM106C-222	ENST00000615597	CCNL1	Q9UK58	526 aa	Predicted RBP	10.21	□□□□□ -0.77
TMEM106C-222	ENST00000615597	PNPLA7	Q6ZV29	1317 aa		10.21	□□□□□ -0.78
TMEM106C-222	ENST00000615597	PALLD	Q8WX93	1383 aa		10.21	□□□□□ -0.78
TMEM106C-222	ENST00000615597	TAF1L	Q8IZX4	1826 aa		10.21	□□□□□ -0.78
TMEM106C-222	ENST00000615597	SPDYE4	A6NLX3	237 aa		10.2	□□□□□ -0.78
TMEM106C-222	ENST00000615597	ZNF831	Q5JPB2	1677 aa		10.2	□□□□□ -0.78
TMEM106C-222	ENST00000615597	MPRIP	Q6WCQ1	1025 aa		10.2	□□□□□ -0.78
TMEM106C-222	ENST00000615597	COL3A1	P02461	1466 aa	Predicted RBP	10.19	□□□□□ -0.78
TMEM106C-222	ENST00000615597	SULT6B1	Q6IMI4	303 aa		10.19	□□□□□ -0.78
TMEM106C-222	ENST00000615597	AEBP1	Q8IUX7	1158 aa		10.19	□□□□□ -0.78
TMEM106C-222	ENST00000615597	ABHD8	Q96I13	439 aa		10.19	□□□□□ -0.78
TMEM106C-222	ENST00000615597	TUBGCP6	Q96RT7	1819 aa		10.19	□□□□□ -0.78
TMEM106C-222	ENST00000615597	C5	P01031	1676 aa		10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	KDM6A	O15550	1401 aa	Predicted RBP	10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	LOC102724428	A0A0B4J2F2	783 aa		10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	SIK1	P57059	783 aa		10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	CC2D1B	Q5T0F9	858 aa	Known RBP	10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	FLAD1	Q8NFF5	587 aa		10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	RBM46	Q8TBY0	533 aa	Known RBP	10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	TMOD3	Q9NYL9	352 aa		10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	TFCP2L1	Q9NZI6	479 aa		10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.18	□□□□□ -0.78
TMEM106C-222	ENST00000615597	CCDC85C	A6NKD9	419 aa		10.17	□□□□□ -0.78
TMEM106C-222	ENST00000615597	DIAPH1	O60610	1272 aa	Known RBP	10.17	□□□□□ -0.78
TMEM106C-222	ENST00000615597	KCNQ4	P56696	695 aa		10.17	□□□□□ -0.78
TMEM106C-222	ENST00000615597	ATG3	Q9NT62	314 aa		10.17	□□□□□ -0.78
TMEM106C-222	ENST00000615597	C4B	P0C0L5	1744 aa		10.16	□□□□□ -0.78
TMEM106C-222	ENST00000615597	ADAMTS7	Q9UKP4	1686 aa		10.16	□□□□□ -0.78
TMEM106C-222	ENST00000615597	FOXN1	O15353	648 aa		10.16	□□□□□ -0.78
TMEM106C-222	ENST00000615597	AKAP4	Q5JQC9	854 aa		10.16	□□□□□ -0.78
TMEM106C-222	ENST00000615597	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.16	□□□□□ -0.78
TMEM106C-222	ENST00000615597	ASAP1	Q9ULH1	1129 aa		10.16	□□□□□ -0.78
TMEM106C-222	ENST00000615597	CIC	Q96RK0	1608 aa	Predicted RBP	10.15	□□□□□ -0.78
TMEM106C-222	ENST00000615597	UBR3	Q6ZT12	1888 aa		10.15	□□□□□ -0.78
TMEM106C-222	ENST00000615597	C1orf141	Q5JVX7	400 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 92 ms