RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
MMP28-205ENST00000615317 COL5A3P25940 1745 aaPredicted RBP11.93□□□□□ -0.5
MMP28-205ENST00000615317 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
MMP28-205ENST00000615317 TEFQ10587 303 aa11.92□□□□□ -0.5
MMP28-205ENST00000615317 TAF1LQ8IZX4 1826 aa11.92□□□□□ -0.5
MMP28-205ENST00000615317 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
MMP28-205ENST00000615317 RREB1Q92766 1687 aa11.91□□□□□ -0.5
MMP28-205ENST00000615317 CABP4P57796 275 aa11.9□□□□□ -0.5
MMP28-205ENST00000615317 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
MMP28-205ENST00000615317 TMOD3Q9NYL9 352 aa11.9□□□□□ -0.5
MMP28-205ENST00000615317 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
MMP28-205ENST00000615317 ZNF831Q5JPB2 1677 aa11.9□□□□□ -0.5
MMP28-205ENST00000615317 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
MMP28-205ENST00000615317 EP400Q96L91 3159 aa11.89□□□□□ -0.51
MMP28-205ENST00000615317 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
MMP28-205ENST00000615317 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
MMP28-205ENST00000615317 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
MMP28-205ENST00000615317 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
MMP28-205ENST00000615317 KCNQ2O43526 872 aa11.88□□□□□ -0.51
MMP28-205ENST00000615317 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
MMP28-205ENST00000615317 PTF1AQ7RTS3 328 aa11.88□□□□□ -0.51
MMP28-205ENST00000615317 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
MMP28-205ENST00000615317 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
MMP28-205ENST00000615317 IFT57Q9NWB7 429 aa11.88□□□□□ -0.51
MMP28-205ENST00000615317 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
MMP28-205ENST00000615317 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
MMP28-205ENST00000615317 ERVV-2B6SEH9 535 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 SLC39A6Q13433 755 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 FAM196AQ6ZSG2 479 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 MBIPQ9NS73 344 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
MMP28-205ENST00000615317 IL16Q14005 1332 aa11.86□□□□□ -0.51
MMP28-205ENST00000615317 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
MMP28-205ENST00000615317 TRIM37O94972 964 aa11.86□□□□□ -0.51
MMP28-205ENST00000615317 GNAI1P63096 354 aa11.86□□□□□ -0.51
MMP28-205ENST00000615317 PIGBQ92521 554 aa11.86□□□□□ -0.51
MMP28-205ENST00000615317 E9PSI1 815 aa11.85□□□□□ -0.51
MMP28-205ENST00000615317 KCNQ3O43525 872 aa11.85□□□□□ -0.51
MMP28-205ENST00000615317 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
MMP28-205ENST00000615317 TTC5Q8N0Z6 440 aa11.85□□□□□ -0.51
MMP28-205ENST00000615317 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
MMP28-205ENST00000615317 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
MMP28-205ENST00000615317 C4BP0C0L5 1744 aa11.85□□□□□ -0.51
MMP28-205ENST00000615317 ZNF853P0CG23 659 aa11.84□□□□□ -0.51
MMP28-205ENST00000615317 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
MMP28-205ENST00000615317 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
MMP28-205ENST00000615317 CHL1O00533 1208 aa11.83□□□□□ -0.52
MMP28-205ENST00000615317 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
MMP28-205ENST00000615317 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
MMP28-205ENST00000615317 ATG3Q9NT62 314 aa11.83□□□□□ -0.52
MMP28-205ENST00000615317 ASAP1Q9ULH1 1129 aa11.83□□□□□ -0.52
MMP28-205ENST00000615317 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
MMP28-205ENST00000615317 DUSP27Q5VZP5 1158 aa11.82□□□□□ -0.52
MMP28-205ENST00000615317 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
MMP28-205ENST00000615317 UBR3Q6ZT12 1888 aa11.82□□□□□ -0.52
MMP28-205ENST00000615317 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
MMP28-205ENST00000615317 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
MMP28-205ENST00000615317 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
MMP28-205ENST00000615317 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
MMP28-205ENST00000615317 BCORQ6W2J9 1755 aa11.81□□□□□ -0.52
MMP28-205ENST00000615317 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
MMP28-205ENST00000615317 SCN7AQ01118 1682 aa11.81□□□□□ -0.52
MMP28-205ENST00000615317 EIF4A1P60842 406 aaKnown RBP11.8□□□□□ -0.52
MMP28-205ENST00000615317 ILDR2Q71H61 639 aa11.8□□□□□ -0.52
MMP28-205ENST00000615317 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
MMP28-205ENST00000615317 BABAM1Q9NWV8 329 aa11.8□□□□□ -0.52
MMP28-205ENST00000615317 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
MMP28-205ENST00000615317 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
MMP28-205ENST00000615317 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
MMP28-205ENST00000615317 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
MMP28-205ENST00000615317 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
MMP28-205ENST00000615317 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
MMP28-205ENST00000615317 QSER1Q2KHR3 1735 aa11.79□□□□□ -0.52
MMP28-205ENST00000615317 APBA3O96018 575 aa11.78□□□□□ -0.52
MMP28-205ENST00000615317 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
MMP28-205ENST00000615317 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
MMP28-205ENST00000615317 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
MMP28-205ENST00000615317 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
MMP28-205ENST00000615317 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.52
MMP28-205ENST00000615317 LOC102724428A0A0B4J2F2 783 aa11.77□□□□□ -0.53
MMP28-205ENST00000615317 KCNQ4P56696 695 aa11.77□□□□□ -0.53
MMP28-205ENST00000615317 SIK1P57059 783 aa11.77□□□□□ -0.53
MMP28-205ENST00000615317 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
MMP28-205ENST00000615317 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
MMP28-205ENST00000615317 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
MMP28-205ENST00000615317 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.53
MMP28-205ENST00000615317 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
MMP28-205ENST00000615317 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
MMP28-205ENST00000615317 ITPK1Q13572 414 aa11.76□□□□□ -0.53
MMP28-205ENST00000615317 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
MMP28-205ENST00000615317 TCERG1O14776 1098 aaKnown RBP11.75□□□□□ -0.53
MMP28-205ENST00000615317 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
MMP28-205ENST00000615317 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
MMP28-205ENST00000615317 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
MMP28-205ENST00000615317 DEFB132Q7Z7B7 95 aa11.75□□□□□ -0.53
MMP28-205ENST00000615317 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms