RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 PLEKHG2Q9H7P9 1386 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 DCTN1Q14203 1278 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 NCBP3Q53F19 620 aaKnown RBP10.56□□□□□ -0.72
PCDH9-205ENST00000614931 SLC27A3Q5K4L6 730 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 ZNF530Q6P9A1 599 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-205ENST00000614931 GAS2L2Q8NHY3 880 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-205ENST00000614931 LRRC4BQ9NT99 713 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 KDM3BQ7LBC6 1761 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 CYP27B1O15528 508 aa10.55□□□□□ -0.72
PCDH9-205ENST00000614931 NEFMP07197 916 aa10.55□□□□□ -0.72
PCDH9-205ENST00000614931 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
PCDH9-205ENST00000614931 KDM6AO15550 1401 aaPredicted RBP10.55□□□□□ -0.72
PCDH9-205ENST00000614931 NKX1-1Q15270 411 aaPredicted RBP10.54□□□□□ -0.72
PCDH9-205ENST00000614931 MCM10Q7L590 875 aa10.54□□□□□ -0.72
PCDH9-205ENST00000614931 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
PCDH9-205ENST00000614931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.72
PCDH9-205ENST00000614931 MRC1P22897 1456 aa10.54□□□□□ -0.72
PCDH9-205ENST00000614931 QSER1Q2KHR3 1735 aa10.53□□□□□ -0.72
PCDH9-205ENST00000614931 ZNF827Q17R98 1081 aa10.53□□□□□ -0.72
PCDH9-205ENST00000614931 AMOTQ4VCS5 1084 aa10.53□□□□□ -0.72
PCDH9-205ENST00000614931 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
PCDH9-205ENST00000614931 SPG7Q9UQ90 795 aa10.53□□□□□ -0.72
PCDH9-205ENST00000614931 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.72
PCDH9-205ENST00000614931 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 ZBTB7AO95365 584 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 PHKG2P15735 406 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 GOLGA2Q08379 1002 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 SLFN5Q08AF3 891 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 AKAP4Q5JQC9 854 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 WDR63Q8IWG1 891 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 TRMT2AQ8IZ69 625 aaKnown RBP10.52□□□□□ -0.73
PCDH9-205ENST00000614931 IL17REQ8NFR9 667 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
PCDH9-205ENST00000614931 RNMTO43148 476 aaKnown RBP10.51□□□□□ -0.73
PCDH9-205ENST00000614931 PTGER2P43116 358 aa10.51□□□□□ -0.73
PCDH9-205ENST00000614931 KCNQ4P56696 695 aa10.51□□□□□ -0.73
PCDH9-205ENST00000614931 LMOD3Q0VAK6 560 aa10.51□□□□□ -0.73
PCDH9-205ENST00000614931 DUSP27Q5VZP5 1158 aa10.51□□□□□ -0.73
PCDH9-205ENST00000614931 MPRIPQ6WCQ1 1025 aa10.51□□□□□ -0.73
PCDH9-205ENST00000614931 MTFR1LQ9H019 292 aa10.51□□□□□ -0.73
PCDH9-205ENST00000614931 PPP1R1BQ9UD71 204 aaPredicted RBP10.51□□□□□ -0.73
PCDH9-205ENST00000614931 IL16Q14005 1332 aa10.51□□□□□ -0.73
PCDH9-205ENST00000614931 UBR2Q8IWV8 1755 aa10.5□□□□□ -0.73
PCDH9-205ENST00000614931 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
PCDH9-205ENST00000614931 ZNF853P0CG23 659 aa10.5□□□□□ -0.73
PCDH9-205ENST00000614931 IFNL2Q8IZJ0 200 aa10.5□□□□□ -0.73
PCDH9-205ENST00000614931 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
PCDH9-205ENST00000614931 CCNL1Q9UK58 526 aaPredicted RBP10.5□□□□□ -0.73
PCDH9-205ENST00000614931 ATF5Q9Y2D1 282 aaPredicted RBP10.5□□□□□ -0.73
PCDH9-205ENST00000614931 TUBGCP6Q96RT7 1819 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 C1orf141Q5JVX7 400 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 PIGBQ92521 554 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 TSR2Q969E8 191 aaKnown RBP10.49□□□□□ -0.73
PCDH9-205ENST00000614931 C5P01031 1676 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 PNPLA7Q6ZV29 1317 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 FANCIQ9NVI1 1328 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 COL24A1Q17RW2 1714 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 PALLDQ8WX93 1383 aa10.49□□□□□ -0.73
PCDH9-205ENST00000614931 E9PSI1 815 aa10.48□□□□□ -0.73
PCDH9-205ENST00000614931 CENPBP07199 599 aaPredicted RBP10.48□□□□□ -0.73
PCDH9-205ENST00000614931 HMGB2P26583 209 aaKnown RBP10.48□□□□□ -0.73
PCDH9-205ENST00000614931 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
PCDH9-205ENST00000614931 RTF1Q92541 710 aaKnown RBP10.48□□□□□ -0.73
PCDH9-205ENST00000614931 SMARCC1Q92922 1105 aaPredicted RBP10.48□□□□□ -0.73
PCDH9-205ENST00000614931 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
PCDH9-205ENST00000614931 TFCP2L1Q9NZI6 479 aa10.48□□□□□ -0.73
PCDH9-205ENST00000614931 TAF1LQ8IZX4 1826 aa10.48□□□□□ -0.73
PCDH9-205ENST00000614931 IFT57Q9NWB7 429 aa10.47□□□□□ -0.73
PCDH9-205ENST00000614931 MIS18AQ9NYP9 233 aa10.47□□□□□ -0.73
PCDH9-205ENST00000614931 LAS1LQ9Y4W2 734 aaKnown RBP10.47□□□□□ -0.73
PCDH9-205ENST00000614931 CHL1O00533 1208 aa10.46□□□□□ -0.73
PCDH9-205ENST00000614931 GNAI1P63096 354 aa10.46□□□□□ -0.73
PCDH9-205ENST00000614931 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
PCDH9-205ENST00000614931 TMOD3Q9NYL9 352 aa10.46□□□□□ -0.73
PCDH9-205ENST00000614931 LAMB4A4D0S4 1761 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 ERVV-2B6SEH9 535 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 KCNQ3O43525 872 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
PCDH9-205ENST00000614931 EXOSC9Q06265 439 aaKnown RBP10.45□□□□□ -0.74
PCDH9-205ENST00000614931 KRT24Q2M2I5 525 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 COL23A1Q86Y22 540 aaPredicted RBP10.45□□□□□ -0.74
PCDH9-205ENST00000614931 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 ARXQ96QS3 562 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 FHDC1Q9C0D6 1143 aaPredicted RBP10.45□□□□□ -0.74
PCDH9-205ENST00000614931 SLC52A2Q9HAB3 445 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 ATG3Q9NT62 314 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
PCDH9-205ENST00000614931 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
PCDH9-205ENST00000614931 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
PCDH9-205ENST00000614931 LOC102724428A0A0B4J2F2 783 aa10.44□□□□□ -0.74
PCDH9-205ENST00000614931 SIK1P57059 783 aa10.44□□□□□ -0.74
PCDH9-205ENST00000614931 CALD1Q05682 793 aaKnown RBP10.44□□□□□ -0.74
PCDH9-205ENST00000614931 SYT17Q9BSW7 474 aa10.44□□□□□ -0.74
PCDH9-205ENST00000614931 MYH16Q9H6N6 1097 aa10.44□□□□□ -0.74
PCDH9-205ENST00000614931 TEFQ10587 303 aa10.43□□□□□ -0.74
PCDH9-205ENST00000614931 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
PCDH9-205ENST00000614931 TSPYL6Q8N831 410 aa10.43□□□□□ -0.74
PCDH9-205ENST00000614931 C8orf58Q8NAV2 365 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms