RNA–Protein interactions for RNA: ENST00000614337.4

KNL1-213, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 3,211 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-213ENST00000614337 IQGAP1P46940 1657 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 CLTCQ00610 1675 aaKnown RBP8.42□□□□□ -1.06
KNL1-213ENST00000614337 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
KNL1-213ENST00000614337 PRR29P0C7W0 189 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 SLFN5Q08AF3 891 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 CNKSR2Q8WXI2 1034 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 ANKRD7Q92527 254 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 KRT28Q7Z3Y7 464 aa8.41□□□□□ -1.06
KNL1-213ENST00000614337 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
KNL1-213ENST00000614337 TMX1Q9H3N1 280 aa8.41□□□□□ -1.06
KNL1-213ENST00000614337 SMC4Q9NTJ3 1288 aa8.41□□□□□ -1.06
KNL1-213ENST00000614337 MROH1Q8NDA8 1641 aa8.41□□□□□ -1.06
KNL1-213ENST00000614337 EP400NLQ6ZTU2 488 aa8.41□□□□□ -1.06
KNL1-213ENST00000614337 KRT222Q8N1A0 295 aa8.41□□□□□ -1.06
KNL1-213ENST00000614337 MYCBPQ99417 103 aaPredicted RBP8.41□□□□□ -1.06
KNL1-213ENST00000614337 NPC1L1Q9UHC9 1359 aa8.4□□□□□ -1.06
KNL1-213ENST00000614337 MPRIPQ6WCQ1 1025 aa8.4□□□□□ -1.06
KNL1-213ENST00000614337 C17orf53Q8N3J3 647 aaPredicted RBP8.4□□□□□ -1.06
KNL1-213ENST00000614337 SNX21Q969T3 373 aa8.4□□□□□ -1.06
KNL1-213ENST00000614337 MAP3K19Q56UN5 1328 aa8.4□□□□□ -1.06
KNL1-213ENST00000614337 SYCE3A1L190 88 aa8.4□□□□□ -1.07
KNL1-213ENST00000614337 FAM182BQ5T319 152 aa8.4□□□□□ -1.07
KNL1-213ENST00000614337 LRSAM1Q6UWE0 723 aa8.4□□□□□ -1.07
KNL1-213ENST00000614337 GPATCH11Q8N954 259 aa8.4□□□□□ -1.07
KNL1-213ENST00000614337 DDX41Q9UJV9 622 aaKnown RBP8.4□□□□□ -1.07
KNL1-213ENST00000614337 FKBP5Q13451 457 aaPredicted RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 TSPYL6Q8N831 410 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 RUNDC1Q96C34 613 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 CTNNA3Q9UI47 895 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 TBX22Q9Y458 520 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 MYOM1P52179 1685 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 ARAP3Q8WWN8 1544 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 GOLGA6L6A8MZA4 724 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 EIF4A2Q14240 407 aaKnown RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 PDE3AQ14432 1141 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 ITPRIPQ8IWB1 547 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 TTC12Q9H892 705 aaPredicted RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 PRPF40AO75400 957 aaKnown RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 HNRNPH2P55795 449 aaKnown RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 CTR9Q6PD62 1173 aa8.39□□□□□ -1.07
KNL1-213ENST00000614337 RTF1Q92541 710 aaKnown RBP8.39□□□□□ -1.07
KNL1-213ENST00000614337 SIGLEC1Q9BZZ2 1709 aa8.38□□□□□ -1.07
KNL1-213ENST00000614337 ASXL1Q8IXJ9 1541 aa8.38□□□□□ -1.07
KNL1-213ENST00000614337 MADDQ8WXG6 1647 aa8.38□□□□□ -1.07
KNL1-213ENST00000614337 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
KNL1-213ENST00000614337 RWDD1Q9H446 243 aaPredicted RBP8.38□□□□□ -1.07
KNL1-213ENST00000614337 MORC2Q9Y6X9 1032 aaPredicted RBP8.38□□□□□ -1.07
KNL1-213ENST00000614337 PTPRUQ92729 1446 aa8.38□□□□□ -1.07
KNL1-213ENST00000614337 MROH2AA6NES4 1674 aa8.38□□□□□ -1.07
KNL1-213ENST00000614337 TET3O43151 1660 aa8.38□□□□□ -1.07
KNL1-213ENST00000614337 EVA1CP58658 441 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 AIMP1Q12904 312 aaKnown RBP8.37□□□□□ -1.07
KNL1-213ENST00000614337 PRDM11Q9NQV5 511 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 TOMM22Q9NS69 142 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
KNL1-213ENST00000614337 DHX16O60231 1041 aaKnown RBP8.37□□□□□ -1.07
KNL1-213ENST00000614337 SLC39A6Q13433 755 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 NCAPGQ9BPX3 1015 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 TMEM94Q12767 1356 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 ATAD2Q6PL18 1390 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 NCOA3Q9Y6Q9 1424 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 MAP3K4Q9Y6R4 1608 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 SPHKAPQ2M3C7 1700 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 LMBRD1Q9NUN5 540 aa8.37□□□□□ -1.07
KNL1-213ENST00000614337 CTIFO43310 598 aaKnown RBP8.36□□□□□ -1.07
KNL1-213ENST00000614337 EYA1Q99502 592 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 RICTORQ6R327 1708 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 ANKRD36BQ8N2N9 1353 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 F6X3S4 739 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 NUCB2P80303 420 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 ICE2Q659A1 982 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 TMED8Q6PL24 325 aaPredicted RBP8.36□□□□□ -1.07
KNL1-213ENST00000614337 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 AXIN2Q9Y2T1 843 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 CEP83Q9Y592 693 aa8.36□□□□□ -1.07
KNL1-213ENST00000614337 PTCD1O75127 700 aaKnown RBP8.35□□□□□ -1.07
KNL1-213ENST00000614337 NCBP1Q09161 790 aaKnown RBP8.35□□□□□ -1.07
KNL1-213ENST00000614337 CLEC17AQ6ZS10 378 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 C10orf67Q8IYJ2 551 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 SIRT1Q96EB6 747 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 TSPY26PQ9H489 355 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 GCP02774 474 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 NOP2P46087 812 aaKnown RBP8.35□□□□□ -1.07
KNL1-213ENST00000614337 TOM1L2Q6ZVM7 507 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 CREBRFQ8IUR6 639 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 KIF18AQ8NI77 898 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 SPTLC3Q9NUV7 552 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 BRPF1P55201 1214 aaPredicted RBP8.35□□□□□ -1.07
KNL1-213ENST00000614337 NBPF6Q5VWK0 638 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 NBPF4Q96M43 638 aa8.35□□□□□ -1.07
KNL1-213ENST00000614337 NOL10Q9BSC4 688 aaKnown RBP8.35□□□□□ -1.07
KNL1-213ENST00000614337 PTPRMP28827 1452 aa8.34□□□□□ -1.07
KNL1-213ENST00000614337 PHF14O94880 888 aa8.34□□□□□ -1.07
KNL1-213ENST00000614337 CCDC172P0C7W6 258 aa8.34□□□□□ -1.07
KNL1-213ENST00000614337 RLBP1P12271 317 aa8.34□□□□□ -1.07
KNL1-213ENST00000614337 KCNQ4P56696 695 aa8.34□□□□□ -1.07
KNL1-213ENST00000614337 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms