RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 TXNRD1Q16881 649 aa16.92■□□□□ 0.3
CCL4-201ENST00000613947 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
CCL4-201ENST00000613947 TMPOP42166 694 aaKnown RBP16.92■□□□□ 0.3
CCL4-201ENST00000613947 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
CCL4-201ENST00000613947 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
CCL4-201ENST00000613947 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
CCL4-201ENST00000613947 RIPK4P57078 832 aa16.91■□□□□ 0.3
CCL4-201ENST00000613947 BCL11AQ9H165 835 aa16.91■□□□□ 0.3
CCL4-201ENST00000613947 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
CCL4-201ENST00000613947 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
CCL4-201ENST00000613947 PALLDQ8WX93 1383 aa16.9■□□□□ 0.3
CCL4-201ENST00000613947 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
CCL4-201ENST00000613947 NEUROD2Q15784 382 aa16.9■□□□□ 0.3
CCL4-201ENST00000613947 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
CCL4-201ENST00000613947 SMARCC1Q92922 1105 aaPredicted RBP16.9■□□□□ 0.3
CCL4-201ENST00000613947 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
CCL4-201ENST00000613947 SRCAPQ6ZRS2 3230 aa16.9■□□□□ 0.3
CCL4-201ENST00000613947 KCNQ4P56696 695 aa16.89■□□□□ 0.3
CCL4-201ENST00000613947 TEFQ10587 303 aa16.89■□□□□ 0.3
CCL4-201ENST00000613947 LRRC4BQ9NT99 713 aa16.89■□□□□ 0.3
CCL4-201ENST00000613947 RGPD3A6NKT7 1758 aaPredicted RBP16.89■□□□□ 0.29
CCL4-201ENST00000613947 RGPD4Q7Z3J3 1758 aa16.89■□□□□ 0.29
CCL4-201ENST00000613947 MRC1P22897 1456 aa16.89■□□□□ 0.29
CCL4-201ENST00000613947 APAF1O14727 1248 aa16.89■□□□□ 0.29
CCL4-201ENST00000613947 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
CCL4-201ENST00000613947 SLC39A6Q13433 755 aa16.87■□□□□ 0.29
CCL4-201ENST00000613947 SLC27A3Q5K4L6 730 aa16.87■□□□□ 0.29
CCL4-201ENST00000613947 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
CCL4-201ENST00000613947 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
CCL4-201ENST00000613947 RREB1Q92766 1687 aa16.86■□□□□ 0.29
CCL4-201ENST00000613947 LOC102724428A0A0B4J2F2 783 aa16.86■□□□□ 0.29
CCL4-201ENST00000613947 SIK1P57059 783 aa16.86■□□□□ 0.29
CCL4-201ENST00000613947 LY75O60449 1722 aa16.86■□□□□ 0.29
CCL4-201ENST00000613947 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
CCL4-201ENST00000613947 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
CCL4-201ENST00000613947 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
CCL4-201ENST00000613947 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
CCL4-201ENST00000613947 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
CCL4-201ENST00000613947 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
CCL4-201ENST00000613947 LMOD3Q0VAK6 560 aa16.84■□□□□ 0.29
CCL4-201ENST00000613947 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
CCL4-201ENST00000613947 ANO8Q9HCE9 1232 aaPredicted RBP16.84■□□□□ 0.29
CCL4-201ENST00000613947 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.28
CCL4-201ENST00000613947 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
CCL4-201ENST00000613947 NBPF14Q5TI25 921 aa16.83■□□□□ 0.28
CCL4-201ENST00000613947 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
CCL4-201ENST00000613947 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.28
CCL4-201ENST00000613947 KCNQ3O43525 872 aa16.82■□□□□ 0.28
CCL4-201ENST00000613947 ITPK1Q13572 414 aa16.82■□□□□ 0.28
CCL4-201ENST00000613947 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
CCL4-201ENST00000613947 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
CCL4-201ENST00000613947 PAPPAQ13219 1627 aa16.8■□□□□ 0.28
CCL4-201ENST00000613947 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
CCL4-201ENST00000613947 SLC15A2Q16348 729 aa16.79■□□□□ 0.28
CCL4-201ENST00000613947 ZNF827Q17R98 1081 aa16.79■□□□□ 0.28
CCL4-201ENST00000613947 LINC00116Q8NCU8 138 aa16.79■□□□□ 0.28
CCL4-201ENST00000613947 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
CCL4-201ENST00000613947 STK32BQ9NY57 414 aa16.79■□□□□ 0.28
CCL4-201ENST00000613947 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
CCL4-201ENST00000613947 KCPQ6ZWJ8 1503 aa16.79■□□□□ 0.28
CCL4-201ENST00000613947 SALL2Q9Y467 1007 aaPredicted RBP16.78■□□□□ 0.28
CCL4-201ENST00000613947 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.27
CCL4-201ENST00000613947 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.27
CCL4-201ENST00000613947 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.27
CCL4-201ENST00000613947 C5P01031 1676 aa16.76■□□□□ 0.27
CCL4-201ENST00000613947 UBR2Q8IWV8 1755 aa16.76■□□□□ 0.27
CCL4-201ENST00000613947 HMGB2P26583 209 aaKnown RBP16.76■□□□□ 0.27
CCL4-201ENST00000613947 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
CCL4-201ENST00000613947 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
CCL4-201ENST00000613947 VSIG10Q8N0Z9 540 aa16.76■□□□□ 0.27
CCL4-201ENST00000613947 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
CCL4-201ENST00000613947 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
CCL4-201ENST00000613947 LAS1LQ9Y4W2 734 aaKnown RBP16.76■□□□□ 0.27
CCL4-201ENST00000613947 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
CCL4-201ENST00000613947 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
CCL4-201ENST00000613947 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
CCL4-201ENST00000613947 CHL1O00533 1208 aa16.74■□□□□ 0.27
CCL4-201ENST00000613947 PDGFDQ9GZP0 370 aaPredicted RBP16.74■□□□□ 0.27
CCL4-201ENST00000613947 AK7Q96M32 723 aa16.74■□□□□ 0.27
CCL4-201ENST00000613947 BABAM1Q9NWV8 329 aa16.74■□□□□ 0.27
CCL4-201ENST00000613947 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
CCL4-201ENST00000613947 EIF4A1P60842 406 aaKnown RBP16.73■□□□□ 0.27
CCL4-201ENST00000613947 AMIGO3Q86WK7 504 aa16.73■□□□□ 0.27
CCL4-201ENST00000613947 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
CCL4-201ENST00000613947 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
CCL4-201ENST00000613947 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
CCL4-201ENST00000613947 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
CCL4-201ENST00000613947 SMIM5Q71RC9 77 aa16.72■□□□□ 0.27
CCL4-201ENST00000613947 TJP1Q07157 1748 aa16.72■□□□□ 0.27
CCL4-201ENST00000613947 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
CCL4-201ENST00000613947 MYH14Q7Z406 1995 aaKnown RBP16.72■□□□□ 0.27
CCL4-201ENST00000613947 GNPATO15228 680 aa16.72■□□□□ 0.27
CCL4-201ENST00000613947 NEFLP07196 543 aa16.72■□□□□ 0.27
CCL4-201ENST00000613947 ZNF853P0CG23 659 aa16.72■□□□□ 0.27
CCL4-201ENST00000613947 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
CCL4-201ENST00000613947 RC3H1Q5TC82 1133 aaKnown RBP16.72■□□□□ 0.27
CCL4-201ENST00000613947 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
CCL4-201ENST00000613947 PNPLA7Q6ZV29 1317 aa16.71■□□□□ 0.27
CCL4-201ENST00000613947 CNTNAP4Q9C0A0 1308 aa16.71■□□□□ 0.27
CCL4-201ENST00000613947 COL5A3P25940 1745 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms