RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
IRF1-211ENST00000613424 SLC27A3Q5K4L6 730 aa21.96■■□□□ 1.11
IRF1-211ENST00000613424 TMPOP42166 694 aaKnown RBP21.95■■□□□ 1.1
IRF1-211ENST00000613424 KCNQ4P56696 695 aa21.95■■□□□ 1.1
IRF1-211ENST00000613424 DCTN1Q14203 1278 aa21.95■■□□□ 1.1
IRF1-211ENST00000613424 MCM10Q7L590 875 aa21.95■■□□□ 1.1
IRF1-211ENST00000613424 CEMIPQ8WUJ3 1361 aa21.95■■□□□ 1.1
IRF1-211ENST00000613424 RIPK4P57078 832 aa21.94■■□□□ 1.1
IRF1-211ENST00000613424 TEFQ10587 303 aa21.94■■□□□ 1.1
IRF1-211ENST00000613424 LY75O60449 1722 aa21.94■■□□□ 1.1
IRF1-211ENST00000613424 MRC1P22897 1456 aa21.93■■□□□ 1.1
IRF1-211ENST00000613424 NUP188Q5SRE5 1749 aa21.93■■□□□ 1.1
IRF1-211ENST00000613424 NBPF14Q5TI25 921 aa21.93■■□□□ 1.1
IRF1-211ENST00000613424 DLG5Q8TDM6 1919 aa21.93■■□□□ 1.1
IRF1-211ENST00000613424 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
IRF1-211ENST00000613424 NEUROD2Q15784 382 aa21.92■■□□□ 1.1
IRF1-211ENST00000613424 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
IRF1-211ENST00000613424 LOC102724428A0A0B4J2F2 783 aa21.91■■□□□ 1.1
IRF1-211ENST00000613424 SIK1P57059 783 aa21.91■■□□□ 1.1
IRF1-211ENST00000613424 SLC39A6Q13433 755 aa21.9■■□□□ 1.1
IRF1-211ENST00000613424 APAF1O14727 1248 aa21.89■■□□□ 1.09
IRF1-211ENST00000613424 FAM9BQ8IZU0 186 aa21.89■■□□□ 1.09
IRF1-211ENST00000613424 RBM42Q9BTD8 480 aaKnown RBP21.89■■□□□ 1.09
IRF1-211ENST00000613424 ANO8Q9HCE9 1232 aaPredicted RBP21.89■■□□□ 1.09
IRF1-211ENST00000613424 CCER2I3L3R5 266 aa21.88■■□□□ 1.09
IRF1-211ENST00000613424 PTCD1O75127 700 aaKnown RBP21.88■■□□□ 1.09
IRF1-211ENST00000613424 SLC4A9Q96Q91 983 aa21.88■■□□□ 1.09
IRF1-211ENST00000613424 BTBD11A6QL63 1104 aa21.87■■□□□ 1.09
IRF1-211ENST00000613424 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
IRF1-211ENST00000613424 R3HDM1Q15032 1099 aaKnown RBP21.87■■□□□ 1.09
IRF1-211ENST00000613424 MIER1Q8N108 512 aa21.87■■□□□ 1.09
IRF1-211ENST00000613424 THUMPD2Q9BTF0 503 aaKnown RBP21.87■■□□□ 1.09
IRF1-211ENST00000613424 SIPA1L3O60292 1781 aaPredicted RBP21.87■■□□□ 1.09
IRF1-211ENST00000613424 PSDA5PKW4 1024 aaPredicted RBP21.86■■□□□ 1.09
IRF1-211ENST00000613424 LMOD3Q0VAK6 560 aa21.86■■□□□ 1.09
IRF1-211ENST00000613424 TAF7Q15545 349 aaPredicted RBP21.86■■□□□ 1.09
IRF1-211ENST00000613424 SLC15A2Q16348 729 aa21.86■■□□□ 1.09
IRF1-211ENST00000613424 STK32BQ9NY57 414 aa21.86■■□□□ 1.09
IRF1-211ENST00000613424 TRIM35Q9UPQ4 493 aa21.86■■□□□ 1.09
IRF1-211ENST00000613424 ITPK1Q13572 414 aa21.85■■□□□ 1.09
IRF1-211ENST00000613424 ZNF790Q6PG37 636 aa21.85■■□□□ 1.09
IRF1-211ENST00000613424 ZNF827Q17R98 1081 aa21.84■■□□□ 1.09
IRF1-211ENST00000613424 TTC5Q8N0Z6 440 aa21.84■■□□□ 1.09
IRF1-211ENST00000613424 AKT1S1Q96B36 256 aa21.84■■□□□ 1.09
IRF1-211ENST00000613424 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
IRF1-211ENST00000613424 HMGB2P26583 209 aaKnown RBP21.83■■□□□ 1.09
IRF1-211ENST00000613424 MIS18AQ9NYP9 233 aa21.83■■□□□ 1.09
IRF1-211ENST00000613424 KCNQ3O43525 872 aa21.82■■□□□ 1.08
IRF1-211ENST00000613424 LINC00116Q8NCU8 138 aa21.82■■□□□ 1.08
IRF1-211ENST00000613424 TAF1LQ8IZX4 1826 aa21.81■■□□□ 1.08
IRF1-211ENST00000613424 SENP3-EIF4A1A0A087X0R7 540 aa21.81■■□□□ 1.08
IRF1-211ENST00000613424 KCPQ6ZWJ8 1503 aa21.8■■□□□ 1.08
IRF1-211ENST00000613424 C5P01031 1676 aa21.8■■□□□ 1.08
IRF1-211ENST00000613424 ZNF496Q96IT1 587 aaPredicted RBP21.8■■□□□ 1.08
IRF1-211ENST00000613424 ZNF831Q5JPB2 1677 aa21.79■■□□□ 1.08
IRF1-211ENST00000613424 VSIG10Q8N0Z9 540 aa21.79■■□□□ 1.08
IRF1-211ENST00000613424 TFCP2L1Q9NZI6 479 aa21.79■■□□□ 1.08
IRF1-211ENST00000613424 FMNL2Q96PY5 1086 aa21.78■■□□□ 1.08
IRF1-211ENST00000613424 UBR2Q8IWV8 1755 aa21.77■■□□□ 1.08
IRF1-211ENST00000613424 DNAJC10Q8IXB1 793 aa21.77■■□□□ 1.08
IRF1-211ENST00000613424 C4BP0C0L5 1744 aa21.76■■□□□ 1.07
IRF1-211ENST00000613424 AK7Q96M32 723 aa21.76■■□□□ 1.07
IRF1-211ENST00000613424 PDGFDQ9GZP0 370 aaPredicted RBP21.76■■□□□ 1.07
IRF1-211ENST00000613424 HEG1Q9ULI3 1381 aa21.75■■□□□ 1.07
IRF1-211ENST00000613424 RC3H1Q5TC82 1133 aaKnown RBP21.75■■□□□ 1.07
IRF1-211ENST00000613424 BABAM1Q9NWV8 329 aa21.75■■□□□ 1.07
IRF1-211ENST00000613424 CCDC27Q2M243 656 aa21.74■■□□□ 1.07
IRF1-211ENST00000613424 NCBP3Q53F19 620 aaKnown RBP21.74■■□□□ 1.07
IRF1-211ENST00000613424 TSPYL4Q9UJ04 414 aa21.74■■□□□ 1.07
IRF1-211ENST00000613424 TJP1Q07157 1748 aa21.74■■□□□ 1.07
IRF1-211ENST00000613424 CYP19A1P11511 503 aaPredicted RBP21.73■■□□□ 1.07
IRF1-211ENST00000613424 CRKLP46109 303 aaKnown RBP21.73■■□□□ 1.07
IRF1-211ENST00000613424 AMIGO3Q86WK7 504 aa21.73■■□□□ 1.07
IRF1-211ENST00000613424 SALL2Q9Y467 1007 aaPredicted RBP21.73■■□□□ 1.07
IRF1-211ENST00000613424 LAS1LQ9Y4W2 734 aaKnown RBP21.73■■□□□ 1.07
IRF1-211ENST00000613424 PNPLA7Q6ZV29 1317 aa21.73■■□□□ 1.07
IRF1-211ENST00000613424 COL5A3P25940 1745 aaPredicted RBP21.72■■□□□ 1.07
IRF1-211ENST00000613424 CHL1O00533 1208 aa21.72■■□□□ 1.07
IRF1-211ENST00000613424 GNPATO15228 680 aa21.72■■□□□ 1.07
IRF1-211ENST00000613424 EIF4A1P60842 406 aaKnown RBP21.72■■□□□ 1.07
IRF1-211ENST00000613424 SMIM5Q71RC9 77 aa21.72■■□□□ 1.07
IRF1-211ENST00000613424 WWC1Q8IX03 1113 aa21.72■■□□□ 1.07
IRF1-211ENST00000613424 TEX13AQ9BXU3 409 aaPredicted RBP21.72■■□□□ 1.07
IRF1-211ENST00000613424 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
IRF1-211ENST00000613424 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
IRF1-211ENST00000613424 CICQ96RK0 1608 aaPredicted RBP21.71■■□□□ 1.07
IRF1-211ENST00000613424 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
IRF1-211ENST00000613424 CALD1Q05682 793 aaKnown RBP21.71■■□□□ 1.07
IRF1-211ENST00000613424 INTS5Q6P9B9 1019 aaKnown RBP21.71■■□□□ 1.07
IRF1-211ENST00000613424 COL23A1Q86Y22 540 aaPredicted RBP21.71■■□□□ 1.07
IRF1-211ENST00000613424 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
IRF1-211ENST00000613424 PRAMEF22A3QJZ6 481 aa21.7■■□□□ 1.06
IRF1-211ENST00000613424 STARD3NLO95772 234 aa21.7■■□□□ 1.06
IRF1-211ENST00000613424 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
IRF1-211ENST00000613424 MYH14Q7Z406 1995 aaKnown RBP21.7■■□□□ 1.06
IRF1-211ENST00000613424 RPS6KA4O75676 772 aa21.69■■□□□ 1.06
IRF1-211ENST00000613424 PHF14O94880 888 aa21.69■■□□□ 1.06
IRF1-211ENST00000613424 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
IRF1-211ENST00000613424 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
IRF1-211ENST00000613424 RTCBQ9Y3I0 505 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms