RNA–Protein interactions for RNA: ENST00000613423.1

LINC01565-202, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

Gene LINC01565, Length 450 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-202ENST00000613423 U2AF1Q01081 240 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01565-202ENST00000613423 AK7Q96M32 723 aa12.86□□□□□ -0.35
LINC01565-202ENST00000613423 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
LINC01565-202ENST00000613423 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
LINC01565-202ENST00000613423 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
LINC01565-202ENST00000613423 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
LINC01565-202ENST00000613423 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
LINC01565-202ENST00000613423 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
LINC01565-202ENST00000613423 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
LINC01565-202ENST00000613423 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
LINC01565-202ENST00000613423 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
LINC01565-202ENST00000613423 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
LINC01565-202ENST00000613423 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
LINC01565-202ENST00000613423 MRC1P22897 1456 aa12.85□□□□□ -0.35
LINC01565-202ENST00000613423 ADAMTS7Q9UKP4 1686 aa12.84□□□□□ -0.35
LINC01565-202ENST00000613423 TEFQ10587 303 aa12.84□□□□□ -0.35
LINC01565-202ENST00000613423 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
LINC01565-202ENST00000613423 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
LINC01565-202ENST00000613423 CICQ96RK0 1608 aaPredicted RBP12.84□□□□□ -0.35
LINC01565-202ENST00000613423 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
LINC01565-202ENST00000613423 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
LINC01565-202ENST00000613423 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
LINC01565-202ENST00000613423 CNTNAP4Q9C0A0 1308 aa12.83□□□□□ -0.36
LINC01565-202ENST00000613423 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
LINC01565-202ENST00000613423 CNGB1Q14028 1251 aaPredicted RBP12.82□□□□□ -0.36
LINC01565-202ENST00000613423 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
LINC01565-202ENST00000613423 TTC5Q8N0Z6 440 aa12.82□□□□□ -0.36
LINC01565-202ENST00000613423 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
LINC01565-202ENST00000613423 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
LINC01565-202ENST00000613423 PNISRQ8TF01 805 aaKnown RBP12.81□□□□□ -0.36
LINC01565-202ENST00000613423 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
LINC01565-202ENST00000613423 COL24A1Q17RW2 1714 aa12.81□□□□□ -0.36
LINC01565-202ENST00000613423 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
LINC01565-202ENST00000613423 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
LINC01565-202ENST00000613423 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
LINC01565-202ENST00000613423 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
LINC01565-202ENST00000613423 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
LINC01565-202ENST00000613423 ZBTB7AO95365 584 aa12.79□□□□□ -0.36
LINC01565-202ENST00000613423 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
LINC01565-202ENST00000613423 ARXQ96QS3 562 aa12.79□□□□□ -0.36
LINC01565-202ENST00000613423 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
LINC01565-202ENST00000613423 MSH5O43196 834 aa12.78□□□□□ -0.36
LINC01565-202ENST00000613423 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
LINC01565-202ENST00000613423 STARD3NLO95772 234 aa12.78□□□□□ -0.36
LINC01565-202ENST00000613423 PTGER2P43116 358 aa12.78□□□□□ -0.36
LINC01565-202ENST00000613423 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01565-202ENST00000613423 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
LINC01565-202ENST00000613423 PRKRIP1Q9H875 184 aaPredicted RBP12.78□□□□□ -0.36
LINC01565-202ENST00000613423 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
LINC01565-202ENST00000613423 GNPATO15228 680 aa12.77□□□□□ -0.37
LINC01565-202ENST00000613423 NLGN1Q8N2Q7 840 aa12.77□□□□□ -0.37
LINC01565-202ENST00000613423 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.37
LINC01565-202ENST00000613423 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
LINC01565-202ENST00000613423 LGR6Q9HBX8 967 aa12.77□□□□□ -0.37
LINC01565-202ENST00000613423 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
LINC01565-202ENST00000613423 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
LINC01565-202ENST00000613423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.76□□□□□ -0.37
LINC01565-202ENST00000613423 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
LINC01565-202ENST00000613423 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
LINC01565-202ENST00000613423 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
LINC01565-202ENST00000613423 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
LINC01565-202ENST00000613423 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
LINC01565-202ENST00000613423 A0A087WZG4 1122 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 BTBD11A6QL63 1104 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 RFC4P35249 363 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 ITPK1Q13572 414 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
LINC01565-202ENST00000613423 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
LINC01565-202ENST00000613423 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
LINC01565-202ENST00000613423 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
LINC01565-202ENST00000613423 RGL2O15211 777 aa12.74□□□□□ -0.37
LINC01565-202ENST00000613423 CRKLP46109 303 aaKnown RBP12.74□□□□□ -0.37
LINC01565-202ENST00000613423 KCNQ4P56696 695 aa12.74□□□□□ -0.37
LINC01565-202ENST00000613423 CCDC87Q9NVE4 849 aa12.74□□□□□ -0.37
LINC01565-202ENST00000613423 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
LINC01565-202ENST00000613423 ANP32CO43423 234 aa12.73□□□□□ -0.37
LINC01565-202ENST00000613423 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
LINC01565-202ENST00000613423 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
LINC01565-202ENST00000613423 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
LINC01565-202ENST00000613423 ZPR1O75312 459 aa12.72□□□□□ -0.37
LINC01565-202ENST00000613423 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
LINC01565-202ENST00000613423 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
LINC01565-202ENST00000613423 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
LINC01565-202ENST00000613423 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
LINC01565-202ENST00000613423 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
LINC01565-202ENST00000613423 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.37
LINC01565-202ENST00000613423 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
LINC01565-202ENST00000613423 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
LINC01565-202ENST00000613423 FHDC1Q9C0D6 1143 aaPredicted RBP12.71□□□□□ -0.37
LINC01565-202ENST00000613423 PHF14O94880 888 aa12.7□□□□□ -0.38
LINC01565-202ENST00000613423 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
LINC01565-202ENST00000613423 TJP1Q07157 1748 aa12.7□□□□□ -0.38
LINC01565-202ENST00000613423 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
LINC01565-202ENST00000613423 DLG5Q8TDM6 1919 aa12.69□□□□□ -0.38
LINC01565-202ENST00000613423 IL6STP40189 918 aaPredicted RBP12.69□□□□□ -0.38
LINC01565-202ENST00000613423 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
LINC01565-202ENST00000613423 DNAJC10Q8IXB1 793 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms