RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 IFIT2P09913 472 aaKnown RBP16.67■□□□□ 0.26
HPS1-215ENST00000613394 MCM2P49736 904 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 PPP1R42Q7Z4L9 355 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 GPT2Q8TD30 523 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 EYA1Q99502 592 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 TPM2P07951 284 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
HPS1-215ENST00000613394 PHAXQ9H814 394 aaKnown RBP16.66■□□□□ 0.26
HPS1-215ENST00000613394 RRP9O43818 475 aaKnown RBP16.66■□□□□ 0.26
HPS1-215ENST00000613394 FOSBP53539 338 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 FERMT3Q86UX7 667 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 MROH1Q8NDA8 1641 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 EDC4Q6P2E9 1401 aaKnown RBP16.66■□□□□ 0.26
HPS1-215ENST00000613394 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 UQCRHP07919 91 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 SIL1Q9H173 461 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 CCDC39Q9UFE4 941 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 USP25Q9UHP3 1055 aa16.66■□□□□ 0.26
HPS1-215ENST00000613394 DEPDC5O75140 1603 aa16.65■□□□□ 0.26
HPS1-215ENST00000613394 CHMLP26374 656 aa16.65■□□□□ 0.26
HPS1-215ENST00000613394 DDIT3P35638 169 aa16.65■□□□□ 0.26
HPS1-215ENST00000613394 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
HPS1-215ENST00000613394 CCDC83Q8IWF9 413 aa16.65■□□□□ 0.26
HPS1-215ENST00000613394 SPC24Q8NBT2 197 aa16.65■□□□□ 0.26
HPS1-215ENST00000613394 PRR36Q9H6K5 1346 aa16.64■□□□□ 0.25
HPS1-215ENST00000613394 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
HPS1-215ENST00000613394 CNTROBQ8N137 903 aa16.64■□□□□ 0.25
HPS1-215ENST00000613394 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
HPS1-215ENST00000613394 AMOTL2Q9Y2J4 779 aa16.64■□□□□ 0.25
HPS1-215ENST00000613394 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
HPS1-215ENST00000613394 WDR33Q9C0J8 1336 aaKnown RBP16.64■□□□□ 0.25
HPS1-215ENST00000613394 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
HPS1-215ENST00000613394 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
HPS1-215ENST00000613394 ABCA9Q8IUA7 1624 aa16.63■□□□□ 0.25
HPS1-215ENST00000613394 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
HPS1-215ENST00000613394 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
HPS1-215ENST00000613394 JAKMIP1Q96N16 626 aaKnown RBP16.63■□□□□ 0.25
HPS1-215ENST00000613394 USP48Q86UV5 1035 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 ATP8B2P98198 1209 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 STK3Q13188 491 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 TCEANC2Q96MN5 208 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
HPS1-215ENST00000613394 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
HPS1-215ENST00000613394 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
HPS1-215ENST00000613394 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
HPS1-215ENST00000613394 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
HPS1-215ENST00000613394 PIK3R4Q99570 1358 aa16.61■□□□□ 0.25
HPS1-215ENST00000613394 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
HPS1-215ENST00000613394 ZNF445P59923 1031 aa16.61■□□□□ 0.25
HPS1-215ENST00000613394 PTPRMP28827 1452 aa16.61■□□□□ 0.25
HPS1-215ENST00000613394 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
HPS1-215ENST00000613394 NEXMIFQ5QGS0 1516 aa16.6■□□□□ 0.25
HPS1-215ENST00000613394 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
HPS1-215ENST00000613394 ZDHHC9Q9Y397 364 aa16.6■□□□□ 0.25
HPS1-215ENST00000613394 LMTK2Q8IWU2 1503 aa16.6■□□□□ 0.25
HPS1-215ENST00000613394 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
HPS1-215ENST00000613394 ATP6V1DQ9Y5K8 247 aa16.59■□□□□ 0.25
HPS1-215ENST00000613394 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
HPS1-215ENST00000613394 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
HPS1-215ENST00000613394 COL3A1P02461 1466 aaPredicted RBP16.59■□□□□ 0.25
HPS1-215ENST00000613394 PSME1Q06323 249 aa16.59■□□□□ 0.25
HPS1-215ENST00000613394 CAMK4Q16566 473 aa16.59■□□□□ 0.25
HPS1-215ENST00000613394 CSPP1Q1MSJ5 1256 aa16.59■□□□□ 0.25
HPS1-215ENST00000613394 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
HPS1-215ENST00000613394 FBXW7Q969H0 707 aa16.59■□□□□ 0.25
HPS1-215ENST00000613394 C1orf141Q5JVX7 400 aa16.58■□□□□ 0.25
HPS1-215ENST00000613394 AACSQ86V21 672 aa16.58■□□□□ 0.25
HPS1-215ENST00000613394 CHPF2Q9P2E5 772 aa16.58■□□□□ 0.25
HPS1-215ENST00000613394 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.25
HPS1-215ENST00000613394 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.24
HPS1-215ENST00000613394 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
HPS1-215ENST00000613394 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.24
HPS1-215ENST00000613394 OFD1O75665 1012 aa16.58■□□□□ 0.24
HPS1-215ENST00000613394 C17orf53Q8N3J3 647 aaPredicted RBP16.58■□□□□ 0.24
HPS1-215ENST00000613394 PPP1R9BQ96SB3 815 aa16.58■□□□□ 0.24
HPS1-215ENST00000613394 CCDC8Q9H0W5 538 aaPredicted RBP16.58■□□□□ 0.24
HPS1-215ENST00000613394 TTC12Q9H892 705 aaPredicted RBP16.58■□□□□ 0.24
HPS1-215ENST00000613394 CEBPZQ03701 1054 aaKnown RBP16.57■□□□□ 0.24
HPS1-215ENST00000613394 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
HPS1-215ENST00000613394 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
HPS1-215ENST00000613394 FSD1Q9BTV5 496 aa16.57■□□□□ 0.24
HPS1-215ENST00000613394 NBPF7P0C2Y1 421 aaPredicted RBP16.57■□□□□ 0.24
HPS1-215ENST00000613394 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
HPS1-215ENST00000613394 PDRG1Q9NUG6 133 aa16.57■□□□□ 0.24
HPS1-215ENST00000613394 ZKSCAN5Q9Y2L8 839 aa16.57■□□□□ 0.24
HPS1-215ENST00000613394 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 ZMYND15Q9H091 742 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
HPS1-215ENST00000613394 ZC3H13Q5T200 1668 aaKnown RBP16.56■□□□□ 0.24
HPS1-215ENST00000613394 PPLO60437 1756 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 BTBD11A6QL63 1104 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 AK2P54819 239 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
HPS1-215ENST00000613394 USP44Q9H0E7 712 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms