RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 ATP6V1AP38606 617 aa16.45■□□□□ 0.22
CBWD1-221ENST00000613355 RALBP1Q15311 655 aa16.45■□□□□ 0.22
CBWD1-221ENST00000613355 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
CBWD1-221ENST00000613355 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
CBWD1-221ENST00000613355 SCN11AQ9UI33 1791 aa16.45■□□□□ 0.22
CBWD1-221ENST00000613355 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
CBWD1-221ENST00000613355 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
CBWD1-221ENST00000613355 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
CBWD1-221ENST00000613355 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
CBWD1-221ENST00000613355 KDM6AO15550 1401 aaPredicted RBP16.44■□□□□ 0.22
CBWD1-221ENST00000613355 C4BP0C0L5 1744 aa16.43■□□□□ 0.22
CBWD1-221ENST00000613355 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
CBWD1-221ENST00000613355 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
CBWD1-221ENST00000613355 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
CBWD1-221ENST00000613355 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
CBWD1-221ENST00000613355 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
CBWD1-221ENST00000613355 TEFQ10587 303 aa16.42■□□□□ 0.22
CBWD1-221ENST00000613355 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
CBWD1-221ENST00000613355 VIRMAQ69YN4 1812 aaKnown RBP16.41■□□□□ 0.22
CBWD1-221ENST00000613355 MAP3K5Q99683 1374 aa16.41■□□□□ 0.22
CBWD1-221ENST00000613355 FCHSD2O94868 740 aa16.41■□□□□ 0.22
CBWD1-221ENST00000613355 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
CBWD1-221ENST00000613355 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
CBWD1-221ENST00000613355 TUBGCP6Q96RT7 1819 aa16.41■□□□□ 0.22
CBWD1-221ENST00000613355 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
CBWD1-221ENST00000613355 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
CBWD1-221ENST00000613355 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
CBWD1-221ENST00000613355 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.21
CBWD1-221ENST00000613355 SSFA2P28290 1259 aa16.39■□□□□ 0.21
CBWD1-221ENST00000613355 ARXQ96QS3 562 aa16.39■□□□□ 0.21
CBWD1-221ENST00000613355 GNPATO15228 680 aa16.38■□□□□ 0.21
CBWD1-221ENST00000613355 PHF14O94880 888 aa16.38■□□□□ 0.21
CBWD1-221ENST00000613355 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
CBWD1-221ENST00000613355 RTCBQ9Y3I0 505 aaKnown RBP16.38■□□□□ 0.21
CBWD1-221ENST00000613355 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
CBWD1-221ENST00000613355 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
CBWD1-221ENST00000613355 PTGER2P43116 358 aa16.36■□□□□ 0.21
CBWD1-221ENST00000613355 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
CBWD1-221ENST00000613355 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
CBWD1-221ENST00000613355 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
CBWD1-221ENST00000613355 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
CBWD1-221ENST00000613355 MRC1P22897 1456 aa16.36■□□□□ 0.21
CBWD1-221ENST00000613355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.36■□□□□ 0.21
CBWD1-221ENST00000613355 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
CBWD1-221ENST00000613355 ITPK1Q13572 414 aa16.35■□□□□ 0.21
CBWD1-221ENST00000613355 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
CBWD1-221ENST00000613355 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
CBWD1-221ENST00000613355 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
CBWD1-221ENST00000613355 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.21
CBWD1-221ENST00000613355 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
CBWD1-221ENST00000613355 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
CBWD1-221ENST00000613355 COL5A3P25940 1745 aaPredicted RBP16.32■□□□□ 0.2
CBWD1-221ENST00000613355 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
CBWD1-221ENST00000613355 RFC4P35249 363 aa16.32■□□□□ 0.2
CBWD1-221ENST00000613355 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
CBWD1-221ENST00000613355 PHACTR3Q96KR7 559 aa16.32■□□□□ 0.2
CBWD1-221ENST00000613355 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
CBWD1-221ENST00000613355 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
CBWD1-221ENST00000613355 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
CBWD1-221ENST00000613355 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
CBWD1-221ENST00000613355 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
CBWD1-221ENST00000613355 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
CBWD1-221ENST00000613355 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
CBWD1-221ENST00000613355 STARD3NLO95772 234 aa16.3■□□□□ 0.2
CBWD1-221ENST00000613355 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
CBWD1-221ENST00000613355 SYT17Q9BSW7 474 aa16.3■□□□□ 0.2
CBWD1-221ENST00000613355 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
CBWD1-221ENST00000613355 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
CBWD1-221ENST00000613355 CRKLP46109 303 aaKnown RBP16.29■□□□□ 0.2
CBWD1-221ENST00000613355 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
CBWD1-221ENST00000613355 IL17REQ8NFR9 667 aa16.29■□□□□ 0.2
CBWD1-221ENST00000613355 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
CBWD1-221ENST00000613355 ZNF790Q6PG37 636 aa16.28■□□□□ 0.2
CBWD1-221ENST00000613355 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
CBWD1-221ENST00000613355 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
CBWD1-221ENST00000613355 SLC4A9Q96Q91 983 aa16.28■□□□□ 0.2
CBWD1-221ENST00000613355 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
CBWD1-221ENST00000613355 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
CBWD1-221ENST00000613355 TJP1Q07157 1748 aa16.28■□□□□ 0.2
CBWD1-221ENST00000613355 SIPA1L3O60292 1781 aaPredicted RBP16.27■□□□□ 0.19
CBWD1-221ENST00000613355 UBR2Q8IWV8 1755 aa16.27■□□□□ 0.19
CBWD1-221ENST00000613355 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.19
CBWD1-221ENST00000613355 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.19
CBWD1-221ENST00000613355 PNISRQ8TF01 805 aaKnown RBP16.27■□□□□ 0.19
CBWD1-221ENST00000613355 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.19
CBWD1-221ENST00000613355 ZPR1O75312 459 aa16.26■□□□□ 0.19
CBWD1-221ENST00000613355 NFE2L2Q16236 605 aa16.26■□□□□ 0.19
CBWD1-221ENST00000613355 MCM10Q7L590 875 aa16.26■□□□□ 0.19
CBWD1-221ENST00000613355 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
CBWD1-221ENST00000613355 KCPQ6ZWJ8 1503 aa16.26■□□□□ 0.19
CBWD1-221ENST00000613355 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
CBWD1-221ENST00000613355 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
CBWD1-221ENST00000613355 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
CBWD1-221ENST00000613355 GPR162Q16538 588 aa16.24■□□□□ 0.19
CBWD1-221ENST00000613355 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
CBWD1-221ENST00000613355 DLG5Q8TDM6 1919 aa16.24■□□□□ 0.19
CBWD1-221ENST00000613355 A0A087WZG4 1122 aa16.23■□□□□ 0.19
CBWD1-221ENST00000613355 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
CBWD1-221ENST00000613355 ZNF496Q96IT1 587 aaPredicted RBP16.23■□□□□ 0.19
CBWD1-221ENST00000613355 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms