RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 FCHSD2O94868 740 aa24.13■■□□□ 1.45
SEMA3B-211ENST00000612509 LOC102724428A0A0B4J2F2 783 aa24.12■■□□□ 1.45
SEMA3B-211ENST00000612509 RNMTO43148 476 aaKnown RBP24.12■■□□□ 1.45
SEMA3B-211ENST00000612509 SIK1P57059 783 aa24.12■■□□□ 1.45
SEMA3B-211ENST00000612509 PDGFDQ9GZP0 370 aaPredicted RBP24.12■■□□□ 1.45
SEMA3B-211ENST00000612509 PRKRIP1Q9H875 184 aaPredicted RBP24.12■■□□□ 1.45
SEMA3B-211ENST00000612509 PHACTR3Q96KR7 559 aa24.11■■□□□ 1.45
SEMA3B-211ENST00000612509 LGR6Q9HBX8 967 aa24.11■■□□□ 1.45
SEMA3B-211ENST00000612509 SLC52A2Q9HAB3 445 aa24.1■■□□□ 1.45
SEMA3B-211ENST00000612509 SIPA1L3O60292 1781 aaPredicted RBP24.1■■□□□ 1.45
SEMA3B-211ENST00000612509 COL5A3P25940 1745 aaPredicted RBP24.1■■□□□ 1.45
SEMA3B-211ENST00000612509 CICQ96RK0 1608 aaPredicted RBP24.1■■□□□ 1.45
SEMA3B-211ENST00000612509 NFATC2IPQ8NCF5 419 aa24.09■■□□□ 1.45
SEMA3B-211ENST00000612509 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
SEMA3B-211ENST00000612509 PNPLA7Q6ZV29 1317 aa24.08■■□□□ 1.44
SEMA3B-211ENST00000612509 UBR3Q6ZT12 1888 aa24.07■■□□□ 1.44
SEMA3B-211ENST00000612509 HMGB2P26583 209 aaKnown RBP24.07■■□□□ 1.44
SEMA3B-211ENST00000612509 TFCP2L1Q9NZI6 479 aa24.07■■□□□ 1.44
SEMA3B-211ENST00000612509 TJP1Q07157 1748 aa24.07■■□□□ 1.44
SEMA3B-211ENST00000612509 UBR2Q8IWV8 1755 aa24.06■■□□□ 1.44
SEMA3B-211ENST00000612509 ZBTB7AO95365 584 aa24.05■■□□□ 1.44
SEMA3B-211ENST00000612509 ATP6V1AP38606 617 aa24.05■■□□□ 1.44
SEMA3B-211ENST00000612509 ITPK1Q13572 414 aa24.05■■□□□ 1.44
SEMA3B-211ENST00000612509 LINC00116Q8NCU8 138 aa24.05■■□□□ 1.44
SEMA3B-211ENST00000612509 SPON1Q9HCB6 807 aa24.05■■□□□ 1.44
SEMA3B-211ENST00000612509 DLG5Q8TDM6 1919 aa24.05■■□□□ 1.44
SEMA3B-211ENST00000612509 KCPQ6ZWJ8 1503 aa24.05■■□□□ 1.44
SEMA3B-211ENST00000612509 CEMIPQ8WUJ3 1361 aa24.04■■□□□ 1.44
SEMA3B-211ENST00000612509 SLC4A9Q96Q91 983 aa24.04■■□□□ 1.44
SEMA3B-211ENST00000612509 RBM42Q9BTD8 480 aaKnown RBP24.04■■□□□ 1.44
SEMA3B-211ENST00000612509 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
SEMA3B-211ENST00000612509 NEFMP07197 916 aa24.02■■□□□ 1.44
SEMA3B-211ENST00000612509 AK7Q96M32 723 aa24.02■■□□□ 1.44
SEMA3B-211ENST00000612509 PLEKHF1Q96S99 279 aa24.02■■□□□ 1.44
SEMA3B-211ENST00000612509 MTFR1LQ9H019 292 aa24.02■■□□□ 1.44
SEMA3B-211ENST00000612509 COL24A1Q17RW2 1714 aa24.01■■□□□ 1.43
SEMA3B-211ENST00000612509 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
SEMA3B-211ENST00000612509 TEFQ10587 303 aa24■■□□□ 1.43
SEMA3B-211ENST00000612509 MAPK8IP3Q9UPT6 1336 aa24■■□□□ 1.43
SEMA3B-211ENST00000612509 SLC39A6Q13433 755 aa23.99■■□□□ 1.43
SEMA3B-211ENST00000612509 PNNQ9H307 717 aaKnown RBP23.99■■□□□ 1.43
SEMA3B-211ENST00000612509 ATF5Q9Y2D1 282 aaPredicted RBP23.98■■□□□ 1.43
SEMA3B-211ENST00000612509 PTGER2P43116 358 aa23.97■■□□□ 1.43
SEMA3B-211ENST00000612509 AMIGO3Q86WK7 504 aa23.97■■□□□ 1.43
SEMA3B-211ENST00000612509 COL23A1Q86Y22 540 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-211ENST00000612509 SLC16A10Q8TF71 515 aa23.97■■□□□ 1.43
SEMA3B-211ENST00000612509 RTF1Q92541 710 aaKnown RBP23.97■■□□□ 1.43
SEMA3B-211ENST00000612509 CNTNAP4Q9C0A0 1308 aa23.97■■□□□ 1.43
SEMA3B-211ENST00000612509 MYH14Q7Z406 1995 aaKnown RBP23.96■■□□□ 1.43
SEMA3B-211ENST00000612509 WDR43Q15061 677 aaKnown RBP eCLIP23.96■■□□□ 1.437e-9■■■□□ 15.1
SEMA3B-211ENST00000612509 MCM10Q7L590 875 aa23.96■■□□□ 1.43
SEMA3B-211ENST00000612509 GNPATO15228 680 aa23.95■■□□□ 1.42
SEMA3B-211ENST00000612509 HTATSF1O43719 755 aaKnown RBP23.95■■□□□ 1.42
SEMA3B-211ENST00000612509 NFE2L2Q16236 605 aa23.95■■□□□ 1.42
SEMA3B-211ENST00000612509 FLAD1Q8NFF5 587 aa23.95■■□□□ 1.42
SEMA3B-211ENST00000612509 MSH5O43196 834 aa23.94■■□□□ 1.42
SEMA3B-211ENST00000612509 PHF14O94880 888 aa23.94■■□□□ 1.42
SEMA3B-211ENST00000612509 SSFA2P28290 1259 aa23.94■■□□□ 1.42
SEMA3B-211ENST00000612509 TTC5Q8N0Z6 440 aa23.94■■□□□ 1.42
SEMA3B-211ENST00000612509 SGIP1Q9BQI5 828 aa23.94■■□□□ 1.42
SEMA3B-211ENST00000612509 PPP1R1BQ9UD71 204 aaPredicted RBP23.94■■□□□ 1.42
SEMA3B-211ENST00000612509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.93■■□□□ 1.42
SEMA3B-211ENST00000612509 DCTN1Q14203 1278 aa23.93■■□□□ 1.42
SEMA3B-211ENST00000612509 C4AP0C0L4 1744 aa23.93■■□□□ 1.42
SEMA3B-211ENST00000612509 RC3H1Q5TC82 1133 aaKnown RBP23.91■■□□□ 1.42
SEMA3B-211ENST00000612509 ZNF790Q6PG37 636 aa23.91■■□□□ 1.42
SEMA3B-211ENST00000612509 SMIM5Q71RC9 77 aa23.91■■□□□ 1.42
SEMA3B-211ENST00000612509 DNAJC10Q8IXB1 793 aa23.91■■□□□ 1.42
SEMA3B-211ENST00000612509 ANP32CO43423 234 aa23.9■■□□□ 1.42
SEMA3B-211ENST00000612509 CCDC146Q8IYE0 955 aa23.9■■□□□ 1.42
SEMA3B-211ENST00000612509 KDM3BQ7LBC6 1761 aa23.89■■□□□ 1.42
SEMA3B-211ENST00000612509 BTBD11A6QL63 1104 aa23.89■■□□□ 1.41
SEMA3B-211ENST00000612509 CRKLP46109 303 aaKnown RBP23.89■■□□□ 1.41
SEMA3B-211ENST00000612509 VSIG10Q8N0Z9 540 aa23.89■■□□□ 1.41
SEMA3B-211ENST00000612509 RTCBQ9Y3I0 505 aaKnown RBP23.89■■□□□ 1.41
SEMA3B-211ENST00000612509 HEG1Q9ULI3 1381 aa23.89■■□□□ 1.41
SEMA3B-211ENST00000612509 ADAMTS8Q9UP79 889 aa23.88■■□□□ 1.41
SEMA3B-211ENST00000612509 MSL1Q68DK7 614 aa23.87■■□□□ 1.41
SEMA3B-211ENST00000612509 ZNF496Q96IT1 587 aaPredicted RBP23.87■■□□□ 1.41
SEMA3B-211ENST00000612509 RPS6KA4O75676 772 aa23.86■■□□□ 1.41
SEMA3B-211ENST00000612509 ADRA2BP18089 450 aa23.86■■□□□ 1.41
SEMA3B-211ENST00000612509 POLD1P28340 1107 aa23.86■■□□□ 1.41
SEMA3B-211ENST00000612509 RUNDC1Q96C34 613 aa23.86■■□□□ 1.41
SEMA3B-211ENST00000612509 KCNQ3O43525 872 aa23.85■■□□□ 1.41
SEMA3B-211ENST00000612509 TMPOP42166 694 aaKnown RBP23.85■■□□□ 1.41
SEMA3B-211ENST00000612509 CCDC184Q52MB2 194 aa23.85■■□□□ 1.41
SEMA3B-211ENST00000612509 FMNL2Q96PY5 1086 aa23.85■■□□□ 1.41
SEMA3B-211ENST00000612509 THUMPD2Q9BTF0 503 aaKnown RBP23.85■■□□□ 1.41
SEMA3B-211ENST00000612509 CYP19A1P11511 503 aaPredicted RBP23.84■■□□□ 1.41
SEMA3B-211ENST00000612509 RIPK4P57078 832 aa23.84■■□□□ 1.41
SEMA3B-211ENST00000612509 ARXQ96QS3 562 aa23.84■■□□□ 1.41
SEMA3B-211ENST00000612509 CCDC87Q9NVE4 849 aa23.84■■□□□ 1.41
SEMA3B-211ENST00000612509 TRAPPC3LQ5T215 181 aa23.83■■□□□ 1.41
SEMA3B-211ENST00000612509 INTS5Q6P9B9 1019 aaKnown RBP23.83■■□□□ 1.41
SEMA3B-211ENST00000612509 LAMB4A4D0S4 1761 aa23.83■■□□□ 1.4
SEMA3B-211ENST00000612509 LMOD3Q0VAK6 560 aa23.82■■□□□ 1.4
SEMA3B-211ENST00000612509 TAF7Q15545 349 aaPredicted RBP23.82■■□□□ 1.4
SEMA3B-211ENST00000612509 ZBTB1Q9Y2K1 713 aa23.82■■□□□ 1.4
SEMA3B-211ENST00000612509 RRP7AQ9Y3A4 280 aaKnown RBP23.82■■□□□ 1.4
SEMA3B-211ENST00000612509 SOS1Q07889 1333 aaPredicted RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms