RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
PCDHGA3-202ENST00000612467 CCT4P50991 539 aaKnown RBP17.44■□□□□ 0.38
PCDHGA3-202ENST00000612467 HDGFL1Q5TGJ6 251 aa17.44■□□□□ 0.38
PCDHGA3-202ENST00000612467 GNAI2P04899 355 aa17.44■□□□□ 0.38
PCDHGA3-202ENST00000612467 IP6K1Q92551 441 aa17.43■□□□□ 0.38
PCDHGA3-202ENST00000612467 HSP90AA1P07900 732 aaKnown RBP17.43■□□□□ 0.38
PCDHGA3-202ENST00000612467 SNX21Q969T3 373 aa17.43■□□□□ 0.38
PCDHGA3-202ENST00000612467 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
PCDHGA3-202ENST00000612467 DDIT3P35638 169 aa17.42■□□□□ 0.38
PCDHGA3-202ENST00000612467 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
PCDHGA3-202ENST00000612467 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
PCDHGA3-202ENST00000612467 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 TNPO1Q92973 898 aaKnown RBP17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 USP26Q9BXU7 913 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 IL1RAPL2Q9NP60 686 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 AK9Q5TCS8 1911 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 PDE1AP54750 535 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 USP44Q9H0E7 712 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
PCDHGA3-202ENST00000612467 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
PCDHGA3-202ENST00000612467 K7ELQ4 463 aaPredicted RBP17.4■□□□□ 0.38
PCDHGA3-202ENST00000612467 HMMRO75330 724 aa17.4■□□□□ 0.38
PCDHGA3-202ENST00000612467 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
PCDHGA3-202ENST00000612467 NFAT5O94916 1531 aa17.39■□□□□ 0.37
PCDHGA3-202ENST00000612467 GCP02774 474 aa17.39■□□□□ 0.37
PCDHGA3-202ENST00000612467 TRAK2O60296 914 aa17.38■□□□□ 0.37
PCDHGA3-202ENST00000612467 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
PCDHGA3-202ENST00000612467 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
PCDHGA3-202ENST00000612467 PXDNQ92626 1479 aa17.38■□□□□ 0.37
PCDHGA3-202ENST00000612467 MAP4K4O95819 1239 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA3-202ENST00000612467 NBPF7P0C2Y1 421 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA3-202ENST00000612467 SSFA2P28290 1259 aa17.37■□□□□ 0.37
PCDHGA3-202ENST00000612467 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA3-202ENST00000612467 ADGRL3Q9HAR2 1447 aa17.37■□□□□ 0.37
PCDHGA3-202ENST00000612467 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
PCDHGA3-202ENST00000612467 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
PCDHGA3-202ENST00000612467 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
PCDHGA3-202ENST00000612467 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
PCDHGA3-202ENST00000612467 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
PCDHGA3-202ENST00000612467 LRRCC1Q9C099 1032 aa17.36■□□□□ 0.37
PCDHGA3-202ENST00000612467 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 BTBD11A6QL63 1104 aa17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 UBTFL1P0CB47 393 aaPredicted RBP17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 GNAI3P08754 354 aa17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 TEFQ10587 303 aa17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 PKP1Q13835 747 aa17.35■□□□□ 0.37
PCDHGA3-202ENST00000612467 TRIM6-TRIM34B2RNG4 842 aa17.34■□□□□ 0.37
PCDHGA3-202ENST00000612467 ANKRD24Q8TF21 1146 aa17.34■□□□□ 0.37
PCDHGA3-202ENST00000612467 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
PCDHGA3-202ENST00000612467 IL25Q9H293 177 aa17.34■□□□□ 0.37
PCDHGA3-202ENST00000612467 MX1P20591 662 aa17.34■□□□□ 0.37
PCDHGA3-202ENST00000612467 CHAMP1Q96JM3 812 aa17.34■□□□□ 0.37
PCDHGA3-202ENST00000612467 SALL3Q9BXA9 1300 aa17.33■□□□□ 0.37
PCDHGA3-202ENST00000612467 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.36
PCDHGA3-202ENST00000612467 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
PCDHGA3-202ENST00000612467 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
PCDHGA3-202ENST00000612467 NOL8Q76FK4 1167 aaKnown RBP17.33■□□□□ 0.36
PCDHGA3-202ENST00000612467 PROSER2Q86WR7 435 aaPredicted RBP17.33■□□□□ 0.36
PCDHGA3-202ENST00000612467 ZGPATQ8N5A5 531 aaKnown RBP17.33■□□□□ 0.36
PCDHGA3-202ENST00000612467 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
PCDHGA3-202ENST00000612467 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
PCDHGA3-202ENST00000612467 ERC2O15083 957 aa17.31■□□□□ 0.36
PCDHGA3-202ENST00000612467 RABEP1Q15276 862 aa17.31■□□□□ 0.36
PCDHGA3-202ENST00000612467 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
PCDHGA3-202ENST00000612467 RNMTO43148 476 aaKnown RBP17.3■□□□□ 0.36
PCDHGA3-202ENST00000612467 SRGAP3O43295 1099 aa17.3■□□□□ 0.36
PCDHGA3-202ENST00000612467 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA3-202ENST00000612467 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
PCDHGA3-202ENST00000612467 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA3-202ENST00000612467 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
PCDHGA3-202ENST00000612467 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
PCDHGA3-202ENST00000612467 BEND3Q5T5X7 828 aa17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 CWF19L2Q2TBE0 894 aaKnown RBP17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 FOXD4L5Q5VV16 416 aaPredicted RBP17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 FOXD4L4Q8WXT5 416 aaPredicted RBP17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 ADCY9O60503 1353 aa17.29■□□□□ 0.36
PCDHGA3-202ENST00000612467 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
PCDHGA3-202ENST00000612467 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
PCDHGA3-202ENST00000612467 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
PCDHGA3-202ENST00000612467 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
PCDHGA3-202ENST00000612467 ESYT1Q9BSJ8 1104 aa17.27■□□□□ 0.36
PCDHGA3-202ENST00000612467 SSH3Q8TE77 659 aa17.27■□□□□ 0.36
PCDHGA3-202ENST00000612467 MAP3K2Q9Y2U5 619 aa17.27■□□□□ 0.36
PCDHGA3-202ENST00000612467 REC8O95072 547 aa17.27■□□□□ 0.35
PCDHGA3-202ENST00000612467 CHMLP26374 656 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms