RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 SDSP20132 328 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 STK3Q13188 491 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 VPS37DQ86XT2 251 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 JAKMIP1Q96N16 626 aaKnown RBP15.78■□□□□ 0.12
TCF3-220ENST00000611869 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 TMEM2Q9UHN6 1383 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 SYNMO15061 1565 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 TRMT2AQ8IZ69 625 aaKnown RBP15.78■□□□□ 0.12
TCF3-220ENST00000611869 HOXC9P31274 260 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 G2E3Q7L622 706 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 CHMP4CQ96CF2 233 aa15.78■□□□□ 0.12
TCF3-220ENST00000611869 METP08581 1390 aa15.77■□□□□ 0.12
TCF3-220ENST00000611869 SYNE3Q6ZMZ3 975 aa15.77■□□□□ 0.12
TCF3-220ENST00000611869 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
TCF3-220ENST00000611869 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.11
TCF3-220ENST00000611869 JARID2Q92833 1246 aaPredicted RBP15.76■□□□□ 0.11
TCF3-220ENST00000611869 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 MBD3O95983 291 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 CCDC57Q2TAC2 916 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 NFXL1Q6ZNB6 911 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 CNNM1Q9NRU3 951 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 HYPKQ9NX55 129 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 UNC13BO14795 1591 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 BECN2A8MW95 431 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 SSFA2P28290 1259 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 CEP85Q6P2H3 762 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 TET3O43151 1660 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 FKBP4Q02790 459 aaKnown RBP eCLIP15.76■□□□□ 0.11
TCF3-220ENST00000611869 CABLES1Q8TDN4 633 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
TCF3-220ENST00000611869 NUTM2BA6NNL0 878 aaPredicted RBP15.75■□□□□ 0.11
TCF3-220ENST00000611869 NUTM2EB1AL46 878 aaPredicted RBP15.75■□□□□ 0.11
TCF3-220ENST00000611869 GOLGA6L19H0YKK7 550 aa15.75■□□□□ 0.11
TCF3-220ENST00000611869 GCP02774 474 aa15.75■□□□□ 0.11
TCF3-220ENST00000611869 NUTM2AQ8IVF1 878 aaPredicted RBP15.75■□□□□ 0.11
TCF3-220ENST00000611869 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
TCF3-220ENST00000611869 KIF1BO60333 1816 aa15.75■□□□□ 0.11
TCF3-220ENST00000611869 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 CASTP20810 708 aaKnown RBP15.74■□□□□ 0.11
TCF3-220ENST00000611869 PDE1AP54750 535 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 BLOC1S2Q6QNY1 142 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 CEP126Q9P2H0 1117 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 KDM4AO75164 1064 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 CDK11BP21127 795 aaKnown RBP15.74■□□□□ 0.11
TCF3-220ENST00000611869 AKAP17AQ02040 695 aaKnown RBP15.74■□□□□ 0.11
TCF3-220ENST00000611869 CCDC158Q5M9N0 1113 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 IFNL2Q8IZJ0 200 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 EFCAB6Q5THR3 1501 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 CHL1O00533 1208 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 PRPF40BQ6NWY9 871 aaKnown RBP15.74■□□□□ 0.11
TCF3-220ENST00000611869 PLEKHF1Q96S99 279 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 LARP6Q9BRS8 491 aaKnown RBP15.74■□□□□ 0.11
TCF3-220ENST00000611869 CFAP74Q9C0B2 1584 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 HECW2Q9P2P5 1572 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 TPM4P67936 248 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 TTC39AQ5SRH9 613 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 PDRG1Q9NUG6 133 aa15.74■□□□□ 0.11
TCF3-220ENST00000611869 A0A087WZG4 1122 aa15.73■□□□□ 0.11
TCF3-220ENST00000611869 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
TCF3-220ENST00000611869 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
TCF3-220ENST00000611869 PLEKHG3A1L390 1219 aa15.73■□□□□ 0.11
TCF3-220ENST00000611869 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
TCF3-220ENST00000611869 PIP4K2AP48426 406 aaPredicted RBP15.73■□□□□ 0.11
TCF3-220ENST00000611869 CADPS2Q86UW7 1296 aa15.73■□□□□ 0.11
TCF3-220ENST00000611869 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
TCF3-220ENST00000611869 PHAXQ9H814 394 aaKnown RBP15.73■□□□□ 0.11
TCF3-220ENST00000611869 ABCC3O15438 1527 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 PDCP20941 246 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 TRIM29Q14134 588 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 RASSF8Q8NHQ8 419 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 GRPEL1Q9HAV7 217 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 ZBTB3Q9H5J0 574 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 AKAP4Q5JQC9 854 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
TCF3-220ENST00000611869 TMX4Q9H1E5 349 aaPredicted RBP15.71■□□□□ 0.11
TCF3-220ENST00000611869 ARAP3Q8WWN8 1544 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 G3V3G9 751 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 CEBPZQ03701 1054 aaKnown RBP15.71■□□□□ 0.11
TCF3-220ENST00000611869 DCAF8Q5TAQ9 597 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 PLEKHM2Q8IWE5 1019 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 CCDC34Q96HJ3 373 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 ATP8B2P98198 1209 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 OTUD7AQ8TE49 926 aaPredicted RBP15.71■□□□□ 0.11
TCF3-220ENST00000611869 TBC1D2BQ9UPU7 963 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 MAP3K5Q99683 1374 aa15.71■□□□□ 0.11
TCF3-220ENST00000611869 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.1
TCF3-220ENST00000611869 IP6K1Q92551 441 aa15.71■□□□□ 0.1
TCF3-220ENST00000611869 ECHDC1Q9NTX5 307 aa15.71■□□□□ 0.1
TCF3-220ENST00000611869 CREBRFQ8IUR6 639 aa15.7■□□□□ 0.1
TCF3-220ENST00000611869 SBNO1A3KN83 1393 aa15.7■□□□□ 0.1
TCF3-220ENST00000611869 TMOD3Q9NYL9 352 aa15.7■□□□□ 0.1
TCF3-220ENST00000611869 MSH6P52701 1360 aa15.7■□□□□ 0.1
TCF3-220ENST00000611869 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
TCF3-220ENST00000611869 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
TCF3-220ENST00000611869 CCDC83Q8IWF9 413 aa15.69■□□□□ 0.1
TCF3-220ENST00000611869 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
TCF3-220ENST00000611869 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
TCF3-220ENST00000611869 SASS6Q6UVJ0 657 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms