RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 NFE2L2Q16236 605 aa11.39□□□□□ -0.59
FAM228B-206ENST00000611138 AKAP4Q5JQC9 854 aa11.39□□□□□ -0.59
FAM228B-206ENST00000611138 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
FAM228B-206ENST00000611138 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
FAM228B-206ENST00000611138 PAPPAQ13219 1627 aa11.38□□□□□ -0.59
FAM228B-206ENST00000611138 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
FAM228B-206ENST00000611138 FAM196AQ6ZSG2 479 aa11.38□□□□□ -0.59
FAM228B-206ENST00000611138 MRC1P22897 1456 aa11.38□□□□□ -0.59
FAM228B-206ENST00000611138 BCL9O00512 1426 aa11.37□□□□□ -0.59
FAM228B-206ENST00000611138 KDM3BQ7LBC6 1761 aa11.37□□□□□ -0.59
FAM228B-206ENST00000611138 APAF1O14727 1248 aa11.37□□□□□ -0.59
FAM228B-206ENST00000611138 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
FAM228B-206ENST00000611138 TMPOP42166 694 aaKnown RBP11.37□□□□□ -0.59
FAM228B-206ENST00000611138 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
FAM228B-206ENST00000611138 LY75O60449 1722 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 RIPK4P57078 832 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 DCTN1Q14203 1278 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
FAM228B-206ENST00000611138 MCM10Q7L590 875 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
FAM228B-206ENST00000611138 DCAF5Q96JK2 942 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 LGR6Q9HBX8 967 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
FAM228B-206ENST00000611138 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 UBR2Q8IWV8 1755 aa11.36□□□□□ -0.59
FAM228B-206ENST00000611138 RNMTO43148 476 aaKnown RBP11.35□□□□□ -0.59
FAM228B-206ENST00000611138 KCNQ2O43526 872 aa11.35□□□□□ -0.59
FAM228B-206ENST00000611138 TRIM37O94972 964 aa11.35□□□□□ -0.59
FAM228B-206ENST00000611138 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
FAM228B-206ENST00000611138 SALL2Q9Y467 1007 aaPredicted RBP11.35□□□□□ -0.59
FAM228B-206ENST00000611138 PRKAR2AP13861 404 aaKnown RBP11.34□□□□□ -0.59
FAM228B-206ENST00000611138 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
FAM228B-206ENST00000611138 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
FAM228B-206ENST00000611138 THUMPD2Q9BTF0 503 aaKnown RBP11.34□□□□□ -0.59
FAM228B-206ENST00000611138 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
FAM228B-206ENST00000611138 CABP4P57796 275 aa11.33□□□□□ -0.6
FAM228B-206ENST00000611138 LMOD3Q0VAK6 560 aa11.33□□□□□ -0.6
FAM228B-206ENST00000611138 TEFQ10587 303 aa11.33□□□□□ -0.6
FAM228B-206ENST00000611138 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
FAM228B-206ENST00000611138 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
FAM228B-206ENST00000611138 RREB1Q92766 1687 aa11.33□□□□□ -0.6
FAM228B-206ENST00000611138 CEMIPQ8WUJ3 1361 aa11.32□□□□□ -0.6
FAM228B-206ENST00000611138 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
FAM228B-206ENST00000611138 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
FAM228B-206ENST00000611138 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
FAM228B-206ENST00000611138 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-206ENST00000611138 C5P01031 1676 aa11.32□□□□□ -0.6
FAM228B-206ENST00000611138 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
FAM228B-206ENST00000611138 TJP1Q07157 1748 aa11.32□□□□□ -0.6
FAM228B-206ENST00000611138 POTEMA6NI47 508 aa11.31□□□□□ -0.6
FAM228B-206ENST00000611138 PIGBQ92521 554 aa11.31□□□□□ -0.6
FAM228B-206ENST00000611138 SLC52A2Q9HAB3 445 aa11.31□□□□□ -0.6
FAM228B-206ENST00000611138 NUP188Q5SRE5 1749 aa11.31□□□□□ -0.6
FAM228B-206ENST00000611138 COL5A3P25940 1745 aaPredicted RBP11.3□□□□□ -0.6
FAM228B-206ENST00000611138 SF3B2Q13435 895 aaKnown RBP11.3□□□□□ -0.6
FAM228B-206ENST00000611138 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
FAM228B-206ENST00000611138 KCPQ6ZWJ8 1503 aa11.3□□□□□ -0.6
FAM228B-206ENST00000611138 APBA3O96018 575 aa11.29□□□□□ -0.6
FAM228B-206ENST00000611138 HNRNPUQ00839 825 aaKnown RBP eCLIP11.29□□□□□ -0.6
FAM228B-206ENST00000611138 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.6
FAM228B-206ENST00000611138 ZNF831Q5JPB2 1677 aa11.29□□□□□ -0.6
FAM228B-206ENST00000611138 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
FAM228B-206ENST00000611138 CICQ96RK0 1608 aaPredicted RBP11.28□□□□□ -0.6
FAM228B-206ENST00000611138 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
FAM228B-206ENST00000611138 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
FAM228B-206ENST00000611138 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
FAM228B-206ENST00000611138 WWC1Q8IX03 1113 aa11.28□□□□□ -0.6
FAM228B-206ENST00000611138 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
FAM228B-206ENST00000611138 ASAP1Q9ULH1 1129 aa11.28□□□□□ -0.6
FAM228B-206ENST00000611138 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
FAM228B-206ENST00000611138 DEFB132Q7Z7B7 95 aa11.27□□□□□ -0.61
FAM228B-206ENST00000611138 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
FAM228B-206ENST00000611138 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.61
FAM228B-206ENST00000611138 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
FAM228B-206ENST00000611138 BAG6P46379 1132 aa11.26□□□□□ -0.61
FAM228B-206ENST00000611138 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
FAM228B-206ENST00000611138 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
FAM228B-206ENST00000611138 TTC5Q8N0Z6 440 aa11.26□□□□□ -0.61
FAM228B-206ENST00000611138 YTHDC1Q96MU7 727 aaKnown RBP11.26□□□□□ -0.61
FAM228B-206ENST00000611138 KCNQ3O43525 872 aa11.25□□□□□ -0.61
FAM228B-206ENST00000611138 PTCD1O75127 700 aaKnown RBP11.25□□□□□ -0.61
FAM228B-206ENST00000611138 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
FAM228B-206ENST00000611138 CCDC125Q86Z20 511 aa11.25□□□□□ -0.61
FAM228B-206ENST00000611138 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
FAM228B-206ENST00000611138 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
FAM228B-206ENST00000611138 TSPYL4Q9UJ04 414 aa11.25□□□□□ -0.61
FAM228B-206ENST00000611138 C4BP0C0L5 1744 aa11.25□□□□□ -0.61
FAM228B-206ENST00000611138 KCNQ4P56696 695 aa11.24□□□□□ -0.61
FAM228B-206ENST00000611138 EZH2Q15910 746 aaKnown RBP11.24□□□□□ -0.61
FAM228B-206ENST00000611138 ZNF790Q6PG37 636 aa11.24□□□□□ -0.61
FAM228B-206ENST00000611138 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
FAM228B-206ENST00000611138 ZNF521Q96K83 1311 aa11.24□□□□□ -0.61
FAM228B-206ENST00000611138 PLSCR1O15162 318 aa11.23□□□□□ -0.61
FAM228B-206ENST00000611138 GNAI1P63096 354 aa11.23□□□□□ -0.61
FAM228B-206ENST00000611138 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
FAM228B-206ENST00000611138 WDR63Q8IWG1 891 aa11.23□□□□□ -0.61
FAM228B-206ENST00000611138 TSR2Q969E8 191 aaKnown RBP11.23□□□□□ -0.61
FAM228B-206ENST00000611138 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
FAM228B-206ENST00000611138 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
FAM228B-206ENST00000611138 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms