RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
RTN1-209ENST00000611068 KIF24Q5T7B8 1368 aa19.87■□□□□ 0.77
RTN1-209ENST00000611068 CT47B1P0C2W7 299 aaPredicted RBP19.87■□□□□ 0.77
RTN1-209ENST00000611068 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
RTN1-209ENST00000611068 KIF1AQ12756 1690 aa19.86■□□□□ 0.77
RTN1-209ENST00000611068 TRAK2O60296 914 aa19.86■□□□□ 0.77
RTN1-209ENST00000611068 BECN1Q14457 450 aa19.86■□□□□ 0.77
RTN1-209ENST00000611068 NCOA3Q9Y6Q9 1424 aa19.86■□□□□ 0.77
RTN1-209ENST00000611068 PCDHB15Q9Y5E8 787 aa19.86■□□□□ 0.77
RTN1-209ENST00000611068 KIAA0232Q92628 1395 aa19.85■□□□□ 0.77
RTN1-209ENST00000611068 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
RTN1-209ENST00000611068 MRPL50Q8N5N7 158 aaKnown RBP19.85■□□□□ 0.77
RTN1-209ENST00000611068 CRB1P82279 1406 aa19.85■□□□□ 0.77
RTN1-209ENST00000611068 SPRYD3Q8NCJ5 442 aa19.85■□□□□ 0.77
RTN1-209ENST00000611068 MVPQ14764 893 aaKnown RBP19.84■□□□□ 0.77
RTN1-209ENST00000611068 TNS3Q68CZ2 1445 aa19.84■□□□□ 0.77
RTN1-209ENST00000611068 USP54Q70EL1 1684 aa19.83■□□□□ 0.77
RTN1-209ENST00000611068 RGPD5Q99666 1765 aa19.83■□□□□ 0.77
RTN1-209ENST00000611068 PXDNQ92626 1479 aa19.83■□□□□ 0.76
RTN1-209ENST00000611068 SLIT3O75094 1523 aa19.83■□□□□ 0.76
RTN1-209ENST00000611068 ERBB3P21860 1342 aa19.83■□□□□ 0.76
RTN1-209ENST00000611068 MAP7D2Q96T17 732 aa19.82■□□□□ 0.76
RTN1-209ENST00000611068 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
RTN1-209ENST00000611068 OFD1O75665 1012 aa19.82■□□□□ 0.76
RTN1-209ENST00000611068 ALDH1L2Q3SY69 923 aa19.82■□□□□ 0.76
RTN1-209ENST00000611068 ALS2Q96Q42 1657 aa19.81■□□□□ 0.76
RTN1-209ENST00000611068 PRDM11Q9NQV5 511 aa19.81■□□□□ 0.76
RTN1-209ENST00000611068 KCNQ3O43525 872 aa19.8■□□□□ 0.76
RTN1-209ENST00000611068 TAF7LQ5H9L4 462 aa19.8■□□□□ 0.76
RTN1-209ENST00000611068 KIF16BQ96L93 1317 aa19.8■□□□□ 0.76
RTN1-209ENST00000611068 IPO8O15397 1037 aaKnown RBP19.8■□□□□ 0.76
RTN1-209ENST00000611068 C1orf115Q9H7X2 142 aa19.8■□□□□ 0.76
RTN1-209ENST00000611068 GAS2L3Q86XJ1 694 aa19.79■□□□□ 0.76
RTN1-209ENST00000611068 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
RTN1-209ENST00000611068 DMTNQ08495 405 aa19.79■□□□□ 0.76
RTN1-209ENST00000611068 PLEKHO1Q53GL0 409 aaPredicted RBP19.79■□□□□ 0.76
RTN1-209ENST00000611068 STRN4Q9NRL3 753 aa19.79■□□□□ 0.76
RTN1-209ENST00000611068 TBC1D2Q9BYX2 928 aa19.78■□□□□ 0.76
RTN1-209ENST00000611068 R3HCC1Q9Y3T6 440 aaKnown RBP19.78■□□□□ 0.76
RTN1-209ENST00000611068 TAF7Q15545 349 aaPredicted RBP19.77■□□□□ 0.76
RTN1-209ENST00000611068 C1orf141Q5JVX7 400 aa19.77■□□□□ 0.76
RTN1-209ENST00000611068 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
RTN1-209ENST00000611068 RAPGEF4Q8WZA2 1011 aa19.77■□□□□ 0.76
RTN1-209ENST00000611068 G2E3Q7L622 706 aa19.76■□□□□ 0.75
RTN1-209ENST00000611068 ZSCAN20P17040 1043 aaPredicted RBP19.75■□□□□ 0.75
RTN1-209ENST00000611068 EIF2S2P20042 333 aaKnown RBP19.75■□□□□ 0.75
RTN1-209ENST00000611068 TEFQ10587 303 aa19.75■□□□□ 0.75
RTN1-209ENST00000611068 UTP14CQ5TAP6 766 aaKnown RBP19.75■□□□□ 0.75
RTN1-209ENST00000611068 PAXIP1Q6ZW49 1069 aaPredicted RBP19.75■□□□□ 0.75
RTN1-209ENST00000611068 PIP4K2BP78356 416 aa19.74■□□□□ 0.75
RTN1-209ENST00000611068 PPP4R3BQ5MIZ7 849 aa19.74■□□□□ 0.75
RTN1-209ENST00000611068 TMEM51Q9NW97 253 aa19.74■□□□□ 0.75
RTN1-209ENST00000611068 F6X3S4 739 aa19.73■□□□□ 0.75
RTN1-209ENST00000611068 HTATSF1O43719 755 aaKnown RBP19.73■□□□□ 0.75
RTN1-209ENST00000611068 AKAP4Q5JQC9 854 aa19.73■□□□□ 0.75
RTN1-209ENST00000611068 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.73■□□□□ 0.75
RTN1-209ENST00000611068 TOM1L2Q6ZVM7 507 aa19.73■□□□□ 0.75
RTN1-209ENST00000611068 IPO4Q8TEX9 1081 aaKnown RBP19.73■□□□□ 0.75
RTN1-209ENST00000611068 DDX19BQ9UMR2 479 aa19.73■□□□□ 0.75
RTN1-209ENST00000611068 SLC4A10Q6U841 1118 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 ZNF428Q96B54 188 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 ZSCAN30Q86W11 494 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 UQCRHLA0A096LP55 91 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 VGLL3A8MV65 326 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
RTN1-209ENST00000611068 UQCRHP07919 91 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 TERF1P54274 439 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
RTN1-209ENST00000611068 ANXA1P04083 346 aa19.71■□□□□ 0.75
RTN1-209ENST00000611068 TATP17735 454 aaPredicted RBP19.71■□□□□ 0.75
RTN1-209ENST00000611068 PHRF1Q9P1Y6 1649 aaKnown RBP19.7■□□□□ 0.74
RTN1-209ENST00000611068 PRAMEF22A3QJZ6 481 aa19.7■□□□□ 0.74
RTN1-209ENST00000611068 EVA1CP58658 441 aa19.7■□□□□ 0.74
RTN1-209ENST00000611068 SLC39A6Q13433 755 aa19.7■□□□□ 0.74
RTN1-209ENST00000611068 ZBTB40Q9NUA8 1239 aa19.7■□□□□ 0.74
RTN1-209ENST00000611068 LARP1Q6PKG0 1096 aaKnown RBP19.69■□□□□ 0.74
RTN1-209ENST00000611068 PLCD3Q8N3E9 789 aa19.69■□□□□ 0.74
RTN1-209ENST00000611068 ZNF830Q96NB3 372 aaPredicted RBP19.68■□□□□ 0.74
RTN1-209ENST00000611068 MEGF6O75095 1541 aa19.68■□□□□ 0.74
RTN1-209ENST00000611068 ZBTB7BO15156 539 aaPredicted RBP19.68■□□□□ 0.74
RTN1-209ENST00000611068 BRPF1P55201 1214 aaPredicted RBP19.68■□□□□ 0.74
RTN1-209ENST00000611068 NFATC2IPQ8NCF5 419 aa19.67■□□□□ 0.74
RTN1-209ENST00000611068 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
RTN1-209ENST00000611068 ISY1Q9ULR0 285 aaKnown RBP19.67■□□□□ 0.74
RTN1-209ENST00000611068 CEMIPQ8WUJ3 1361 aa19.66■□□□□ 0.74
RTN1-209ENST00000611068 ARHGAP45Q92619 1136 aa19.66■□□□□ 0.74
RTN1-209ENST00000611068 RWDD1Q9H446 243 aaPredicted RBP19.66■□□□□ 0.74
RTN1-209ENST00000611068 PHAXQ9H814 394 aaKnown RBP19.66■□□□□ 0.74
RTN1-209ENST00000611068 MSNP26038 577 aaKnown RBP19.66■□□□□ 0.74
RTN1-209ENST00000611068 HDGFL1Q5TGJ6 251 aa19.66■□□□□ 0.74
RTN1-209ENST00000611068 ANP32BQ92688 251 aaKnown RBP19.66■□□□□ 0.74
RTN1-209ENST00000611068 API5Q9BZZ5 524 aaKnown RBP19.66■□□□□ 0.74
RTN1-209ENST00000611068 CYP27B1O15528 508 aa19.65■□□□□ 0.74
RTN1-209ENST00000611068 EIF4A1P60842 406 aaKnown RBP19.65■□□□□ 0.74
RTN1-209ENST00000611068 DDX54Q8TDD1 881 aaKnown RBP19.65■□□□□ 0.74
RTN1-209ENST00000611068 CAMTA1Q9Y6Y1 1673 aa19.65■□□□□ 0.74
RTN1-209ENST00000611068 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
RTN1-209ENST00000611068 FKBP5Q13451 457 aaPredicted RBP19.65■□□□□ 0.74
RTN1-209ENST00000611068 BTG4Q9NY30 223 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms