RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 BRINP3Q76B58 766 aa23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 NASPP49321 788 aaPredicted RBP23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 KLHL40Q2TBA0 621 aa23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 ANKRD45Q5TZF3 282 aa23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 TBC1D9Q6ZT07 1266 aa23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 ZNF428Q96B54 188 aa23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 CHMP4BQ9H444 224 aaKnown RBP23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 PXDNQ92626 1479 aa23.55■■□□□ 1.36
SEMA3B-210ENST00000611067 SLAIN2Q9P270 581 aa23.55■■□□□ 1.36
SEMA3B-210ENST00000611067 SSFA2P28290 1259 aa23.54■■□□□ 1.36
SEMA3B-210ENST00000611067 GAS2L2Q8NHY3 880 aa23.54■■□□□ 1.36
SEMA3B-210ENST00000611067 ZMYND15Q9H091 742 aa23.54■■□□□ 1.36
SEMA3B-210ENST00000611067 FOXD4L1Q9NU39 408 aa23.54■■□□□ 1.36
SEMA3B-210ENST00000611067 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
SEMA3B-210ENST00000611067 DCTN1Q14203 1278 aa23.53■■□□□ 1.36
SEMA3B-210ENST00000611067 MED1Q15648 1581 aaPredicted RBP23.53■■□□□ 1.36
SEMA3B-210ENST00000611067 ZSCAN30Q86W11 494 aa23.53■■□□□ 1.36
SEMA3B-210ENST00000611067 ANP32BQ92688 251 aaKnown RBP23.53■■□□□ 1.36
SEMA3B-210ENST00000611067 CFAP44Q96MT7 982 aa23.53■■□□□ 1.36
SEMA3B-210ENST00000611067 MTHFSDQ2M296 383 aaKnown RBP23.53■■□□□ 1.36
SEMA3B-210ENST00000611067 ZNF853P0CG23 659 aa23.52■■□□□ 1.36
SEMA3B-210ENST00000611067 RTF1Q92541 710 aaKnown RBP23.52■■□□□ 1.36
SEMA3B-210ENST00000611067 RBM42Q9BTD8 480 aaKnown RBP23.52■■□□□ 1.36
SEMA3B-210ENST00000611067 BAG4O95429 457 aaKnown RBP23.51■■□□□ 1.35
SEMA3B-210ENST00000611067 DDX49Q9Y6V7 483 aaKnown RBP23.51■■□□□ 1.35
SEMA3B-210ENST00000611067 SPATA31A3Q5VYP0 1347 aa23.51■■□□□ 1.35
SEMA3B-210ENST00000611067 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
SEMA3B-210ENST00000611067 MBIPQ9NS73 344 aa23.5■■□□□ 1.35
SEMA3B-210ENST00000611067 KIAA1211Q6ZU35 1233 aa23.49■■□□□ 1.35
SEMA3B-210ENST00000611067 MCM10Q7L590 875 aa23.49■■□□□ 1.35
SEMA3B-210ENST00000611067 ARHGAP45Q92619 1136 aa23.49■■□□□ 1.35
SEMA3B-210ENST00000611067 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
SEMA3B-210ENST00000611067 NBPF6Q5VWK0 638 aa23.48■■□□□ 1.35
SEMA3B-210ENST00000611067 NBPF4Q96M43 638 aa23.48■■□□□ 1.35
SEMA3B-210ENST00000611067 CDC45O75419 566 aa23.48■■□□□ 1.35
SEMA3B-210ENST00000611067 ZNF445P59923 1031 aa23.48■■□□□ 1.35
SEMA3B-210ENST00000611067 PDCL3Q9H2J4 239 aa23.48■■□□□ 1.35
SEMA3B-210ENST00000611067 OFD1O75665 1012 aa23.47■■□□□ 1.35
SEMA3B-210ENST00000611067 ANKRD24Q8TF21 1146 aa23.47■■□□□ 1.35
SEMA3B-210ENST00000611067 RGPD2P0DJD1 1756 aa23.46■■□□□ 1.35
SEMA3B-210ENST00000611067 MSNP26038 577 aaKnown RBP23.45■■□□□ 1.35
SEMA3B-210ENST00000611067 LRRC59Q96AG4 307 aaKnown RBP23.45■■□□□ 1.35
SEMA3B-210ENST00000611067 TERF1P54274 439 aa23.45■■□□□ 1.34
SEMA3B-210ENST00000611067 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 NUCB2P80303 420 aa23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 RABEP1Q15276 862 aa23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 HS1BP3Q53T59 392 aa23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 SIRT2Q8IXJ6 389 aa23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 MRPL50Q8N5N7 158 aaKnown RBP23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 C1orf115Q9H7X2 142 aa23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 CABLES1Q8TDN4 633 aa23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 AXIN2Q9Y2T1 843 aa23.44■■□□□ 1.34
SEMA3B-210ENST00000611067 SOS2Q07890 1332 aaPredicted RBP23.43■■□□□ 1.34
SEMA3B-210ENST00000611067 GNAT3A8MTJ3 354 aa23.43■■□□□ 1.34
SEMA3B-210ENST00000611067 VAMP4O75379 141 aa23.43■■□□□ 1.34
SEMA3B-210ENST00000611067 RGPD5Q99666 1765 aa23.43■■□□□ 1.34
SEMA3B-210ENST00000611067 CRYBG1Q9Y4K1 1723 aa23.43■■□□□ 1.34
SEMA3B-210ENST00000611067 AK9Q5TCS8 1911 aa23.42■■□□□ 1.34
SEMA3B-210ENST00000611067 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
SEMA3B-210ENST00000611067 ERBB3P21860 1342 aa23.42■■□□□ 1.34
SEMA3B-210ENST00000611067 CRB1P82279 1406 aa23.41■■□□□ 1.34
SEMA3B-210ENST00000611067 ABCC4O15439 1325 aa23.41■■□□□ 1.34
SEMA3B-210ENST00000611067 CHL1O00533 1208 aa23.41■■□□□ 1.34
SEMA3B-210ENST00000611067 CYP2E1P05181 493 aaPredicted RBP23.41■■□□□ 1.34
SEMA3B-210ENST00000611067 TWISTNBQ3B726 338 aaPredicted RBP23.41■■□□□ 1.34
SEMA3B-210ENST00000611067 GSPT1P15170 499 aaKnown RBP23.4■■□□□ 1.34
SEMA3B-210ENST00000611067 MCTP1Q6DN14 999 aa23.4■■□□□ 1.34
SEMA3B-210ENST00000611067 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
SEMA3B-210ENST00000611067 CAMTA1Q9Y6Y1 1673 aa23.39■■□□□ 1.34
SEMA3B-210ENST00000611067 ELL2O00472 640 aaPredicted RBP23.39■■□□□ 1.34
SEMA3B-210ENST00000611067 TSPYL6Q8N831 410 aa23.39■■□□□ 1.34
SEMA3B-210ENST00000611067 ABCC6O95255 1503 aa23.39■■□□□ 1.34
SEMA3B-210ENST00000611067 ZSCAN23Q3MJ62 389 aa23.39■■□□□ 1.33
SEMA3B-210ENST00000611067 LMBRD1Q9NUN5 540 aa23.39■■□□□ 1.33
SEMA3B-210ENST00000611067 HAP1P54257 671 aaPredicted RBP23.38■■□□□ 1.33
SEMA3B-210ENST00000611067 NHSL1Q5SYE7 1610 aa23.38■■□□□ 1.33
SEMA3B-210ENST00000611067 LRRC37A3O60309 1634 aa23.37■■□□□ 1.33
SEMA3B-210ENST00000611067 CAVIN1Q6NZI2 390 aaKnown RBP23.37■■□□□ 1.33
SEMA3B-210ENST00000611067 PLEKHM2Q8IWE5 1019 aa23.37■■□□□ 1.33
SEMA3B-210ENST00000611067 C8orf58Q8NAV2 365 aa23.37■■□□□ 1.33
SEMA3B-210ENST00000611067 PDLIM2Q96JY6 352 aa23.37■■□□□ 1.33
SEMA3B-210ENST00000611067 CPDO75976 1380 aa23.37■■□□□ 1.33
SEMA3B-210ENST00000611067 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
SEMA3B-210ENST00000611067 CWC22Q9HCG8 908 aaKnown RBP23.36■■□□□ 1.33
SEMA3B-210ENST00000611067 NOL7Q9UMY1 257 aaKnown RBP23.36■■□□□ 1.33
SEMA3B-210ENST00000611067 COL18A1P39060 1754 aa23.36■■□□□ 1.33
SEMA3B-210ENST00000611067 PLEKHO1Q53GL0 409 aaPredicted RBP23.36■■□□□ 1.33
SEMA3B-210ENST00000611067 TSPYL4Q9UJ04 414 aa23.36■■□□□ 1.33
SEMA3B-210ENST00000611067 AMOTQ4VCS5 1084 aa23.35■■□□□ 1.33
SEMA3B-210ENST00000611067 ZNF500O60304 480 aaPredicted RBP23.35■■□□□ 1.33
SEMA3B-210ENST00000611067 CHRNA2Q15822 529 aa23.35■■□□□ 1.33
SEMA3B-210ENST00000611067 USP26Q9BXU7 913 aa23.35■■□□□ 1.33
SEMA3B-210ENST00000611067 CSB-PGBD3P0DP91 1061 aa23.34■■□□□ 1.33
SEMA3B-210ENST00000611067 NCLP19338 710 aaKnown RBP23.34■■□□□ 1.33
SEMA3B-210ENST00000611067 TTC22Q5TAA0 569 aa23.34■■□□□ 1.33
SEMA3B-210ENST00000611067 NLRP2Q9NX02 1062 aa23.34■■□□□ 1.33
SEMA3B-210ENST00000611067 RBSNQ9H1K0 784 aa23.33■■□□□ 1.33
SEMA3B-210ENST00000611067 FAM208AQ9UK61 1670 aaKnown RBP23.33■■□□□ 1.32
SEMA3B-210ENST00000611067 LMO7Q8WWI1 1683 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms