RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 NECTIN2Q92692 538 aa35.01■■■■□ 3.19
CSPG5-205ENST00000610462 FKBP5Q13451 457 aaPredicted RBP35■■■■□ 3.19
CSPG5-205ENST00000610462 C22orf23Q9BZE7 217 aa35■■■■□ 3.19
CSPG5-205ENST00000610462 OVOS2A0A0G2JMS6 1433 aa34.98■■■■□ 3.19
CSPG5-205ENST00000610462 EIF4A1P60842 406 aaKnown RBP34.97■■■■□ 3.19
CSPG5-205ENST00000610462 HDGFL1Q5TGJ6 251 aa34.97■■■■□ 3.19
CSPG5-205ENST00000610462 PXDNLA1KZ92 1463 aa34.97■■■■□ 3.19
CSPG5-205ENST00000610462 PXDNQ92626 1479 aa34.97■■■■□ 3.19
CSPG5-205ENST00000610462 USP35Q9P2H5 1018 aa34.97■■■■□ 3.19
CSPG5-205ENST00000610462 HOXB7P09629 217 aa34.96■■■■□ 3.19
CSPG5-205ENST00000610462 TEFQ10587 303 aa34.96■■■■□ 3.19
CSPG5-205ENST00000610462 C1orf141Q5JVX7 400 aa34.96■■■■□ 3.19
CSPG5-205ENST00000610462 CADPS2Q86UW7 1296 aa34.95■■■■□ 3.19
CSPG5-205ENST00000610462 HMMRO75330 724 aa34.94■■■■□ 3.18
CSPG5-205ENST00000610462 RNMTO43148 476 aaKnown RBP34.94■■■■□ 3.18
CSPG5-205ENST00000610462 MPRIPQ6WCQ1 1025 aa34.94■■■■□ 3.18
CSPG5-205ENST00000610462 ERBB3P21860 1342 aa34.93■■■■□ 3.18
CSPG5-205ENST00000610462 PLEKHM2Q8IWE5 1019 aa34.93■■■■□ 3.18
CSPG5-205ENST00000610462 CHMP4AQ9BY43 222 aa34.93■■■■□ 3.18
CSPG5-205ENST00000610462 GNAI2P04899 355 aa34.93■■■■□ 3.18
CSPG5-205ENST00000610462 ZC3H6P61129 1189 aaKnown RBP34.93■■■■□ 3.18
CSPG5-205ENST00000610462 LMTK3Q96Q04 1460 aa34.92■■■■□ 3.18
CSPG5-205ENST00000610462 NPHP3Q7Z494 1330 aa34.91■■■■□ 3.18
CSPG5-205ENST00000610462 BTBD11A6QL63 1104 aa34.91■■■■□ 3.18
CSPG5-205ENST00000610462 GNAI3P08754 354 aa34.91■■■■□ 3.18
CSPG5-205ENST00000610462 DDX17Q92841 729 aaKnown RBP34.91■■■■□ 3.18
CSPG5-205ENST00000610462 COL18A1P39060 1754 aa34.9■■■■□ 3.18
CSPG5-205ENST00000610462 HSPA2P54652 639 aa34.9■■■■□ 3.18
CSPG5-205ENST00000610462 SIPA1L3O60292 1781 aaPredicted RBP34.89■■■■□ 3.18
CSPG5-205ENST00000610462 DEKP35659 375 aaKnown RBP34.89■■■■□ 3.18
CSPG5-205ENST00000610462 XIRP1Q702N8 1843 aaKnown RBP34.89■■■■□ 3.18
CSPG5-205ENST00000610462 ADAMTS7Q9UKP4 1686 aa34.89■■■■□ 3.18
CSPG5-205ENST00000610462 CRYBG1Q9Y4K1 1723 aa34.88■■■■□ 3.17
CSPG5-205ENST00000610462 KCNQ3O43525 872 aa34.88■■■■□ 3.17
CSPG5-205ENST00000610462 TNS3Q68CZ2 1445 aa34.87■■■■□ 3.17
CSPG5-205ENST00000610462 TBC1D2Q9BYX2 928 aa34.86■■■■□ 3.17
CSPG5-205ENST00000610462 PHAXQ9H814 394 aaKnown RBP34.86■■■■□ 3.17
CSPG5-205ENST00000610462 EIF2S2P20042 333 aaKnown RBP34.85■■■■□ 3.17
CSPG5-205ENST00000610462 RBM25P49756 843 aaKnown RBP34.85■■■■□ 3.17
CSPG5-205ENST00000610462 C16orf71Q8IYS4 520 aaPredicted RBP34.85■■■■□ 3.17
CSPG5-205ENST00000610462 GSPT1P15170 499 aaKnown RBP34.84■■■■□ 3.17
CSPG5-205ENST00000610462 TTC22Q5TAA0 569 aa34.84■■■■□ 3.17
CSPG5-205ENST00000610462 TBC1D9Q6ZT07 1266 aa34.84■■■■□ 3.17
CSPG5-205ENST00000610462 ABCC6O95255 1503 aa34.83■■■■□ 3.17
CSPG5-205ENST00000610462 CDC45O75419 566 aa34.82■■■■□ 3.16
CSPG5-205ENST00000610462 NFKBIBQ15653 356 aa34.82■■■■□ 3.16
CSPG5-205ENST00000610462 SMARCA5O60264 1052 aaPredicted RBP34.81■■■■□ 3.16
CSPG5-205ENST00000610462 CHPF2Q9P2E5 772 aa34.8■■■■□ 3.16
CSPG5-205ENST00000610462 ATP8B2P98198 1209 aa34.8■■■■□ 3.16
CSPG5-205ENST00000610462 APBB1O00213 710 aa34.78■■■■□ 3.16
CSPG5-205ENST00000610462 SPATA31A3Q5VYP0 1347 aa34.78■■■■□ 3.16
CSPG5-205ENST00000610462 RAPGEF4Q8WZA2 1011 aa34.78■■■■□ 3.16
CSPG5-205ENST00000610462 USP44Q9H0E7 712 aa34.78■■■■□ 3.16
CSPG5-205ENST00000610462 HEG1Q9ULI3 1381 aa34.78■■■■□ 3.16
CSPG5-205ENST00000610462 OTUD7AQ8TE49 926 aaPredicted RBP34.78■■■■□ 3.16
CSPG5-205ENST00000610462 NLRP2Q9NX02 1062 aa34.78■■■■□ 3.16
CSPG5-205ENST00000610462 SCN11AQ9UI33 1791 aa34.78■■■■□ 3.16
CSPG5-205ENST00000610462 STRCQ7RTU9 1775 aa34.76■■■■□ 3.16
CSPG5-205ENST00000610462 EIF5BO60841 1220 aaKnown RBP34.75■■■■□ 3.15
CSPG5-205ENST00000610462 CABLES1Q8TDN4 633 aa34.75■■■■□ 3.15
CSPG5-205ENST00000610462 SRCIN1Q9C0H9 1055 aa34.75■■■■□ 3.15
CSPG5-205ENST00000610462 BCL11AQ9H165 835 aa34.75■■■■□ 3.15
CSPG5-205ENST00000610462 LRRFIP2Q9Y608 721 aaKnown RBP34.75■■■■□ 3.15
CSPG5-205ENST00000610462 UBTFL1P0CB47 393 aaPredicted RBP34.74■■■■□ 3.15
CSPG5-205ENST00000610462 TATP17735 454 aaPredicted RBP34.74■■■■□ 3.15
CSPG5-205ENST00000610462 GIGYF1O75420 1035 aaPredicted RBP34.74■■■■□ 3.15
CSPG5-205ENST00000610462 DBF4Q9UBU7 674 aaPredicted RBP34.73■■■■□ 3.15
CSPG5-205ENST00000610462 PNMA6EA0A0J9YXQ4 647 aa34.72■■■■□ 3.15
CSPG5-205ENST00000610462 PLEKHG2Q9H7P9 1386 aa34.72■■■■□ 3.15
CSPG5-205ENST00000610462 DNAAF4Q8WXU2 420 aa34.72■■■■□ 3.15
CSPG5-205ENST00000610462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.72■■■■□ 3.15
CSPG5-205ENST00000610462 ANTXR1Q9H6X2 564 aa34.71■■■■□ 3.15
CSPG5-205ENST00000610462 SPG7Q9UQ90 795 aa34.71■■■■□ 3.15
CSPG5-205ENST00000610462 CPDO75976 1380 aa34.7■■■■□ 3.15
CSPG5-205ENST00000610462 EXOC6BQ9Y2D4 811 aa34.7■■■■□ 3.15
CSPG5-205ENST00000610462 MEGF6O75095 1541 aa34.7■■■■□ 3.15
CSPG5-205ENST00000610462 OSBPL3Q9H4L5 887 aa34.7■■■■□ 3.15
CSPG5-205ENST00000610462 CSB-PGBD3P0DP91 1061 aa34.69■■■■□ 3.14
CSPG5-205ENST00000610462 SLKQ9H2G2 1235 aaPredicted RBP34.69■■■■□ 3.14
CSPG5-205ENST00000610462 PI4KAP2A4QPH2 592 aa34.69■■■■□ 3.14
CSPG5-205ENST00000610462 BEND3Q5T5X7 828 aa34.69■■■■□ 3.14
CSPG5-205ENST00000610462 PI4KAP1Q8N8J0 262 aa34.69■■■■□ 3.14
CSPG5-205ENST00000610462 CHRNA2Q15822 529 aa34.68■■■■□ 3.14
CSPG5-205ENST00000610462 BRINP3Q76B58 766 aa34.68■■■■□ 3.14
CSPG5-205ENST00000610462 IBTKQ9P2D0 1353 aaPredicted RBP34.68■■■■□ 3.14
CSPG5-205ENST00000610462 KDM6AO15550 1401 aaPredicted RBP34.67■■■■□ 3.14
CSPG5-205ENST00000610462 PHKG2P15735 406 aa34.67■■■■□ 3.14
CSPG5-205ENST00000610462 LRRCC1Q9C099 1032 aa34.67■■■■□ 3.14
CSPG5-205ENST00000610462 ADCY9O60503 1353 aa34.67■■■■□ 3.14
CSPG5-205ENST00000610462 ANXA1P04083 346 aa34.67■■■■□ 3.14
CSPG5-205ENST00000610462 SDSP20132 328 aa34.67■■■■□ 3.14
CSPG5-205ENST00000610462 PKD1L3Q7Z443 1732 aa34.66■■■■□ 3.14
CSPG5-205ENST00000610462 HSCBQ8IWL3 235 aa34.66■■■■□ 3.14
CSPG5-205ENST00000610462 SNX21Q969T3 373 aa34.66■■■■□ 3.14
CSPG5-205ENST00000610462 PDE1AP54750 535 aa34.64■■■■□ 3.14
CSPG5-205ENST00000610462 SSH3Q8TE77 659 aa34.64■■■■□ 3.14
CSPG5-205ENST00000610462 SLC52A2Q9HAB3 445 aa34.64■■■■□ 3.14
CSPG5-205ENST00000610462 KIF2CQ99661 725 aa34.64■■■■□ 3.14
CSPG5-205ENST00000610462 IFNL2Q8IZJ0 200 aa34.63■■■■□ 3.13
CSPG5-205ENST00000610462 SALL3Q9BXA9 1300 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms