RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
LMBR1-221ENST00000609774 CEP350Q5VT06 3117 aa9.87□□□□□ -0.83
LMBR1-221ENST00000609774 NHSQ6T4R5 1651 aa9.87□□□□□ -0.83
LMBR1-221ENST00000609774 WDR17Q8IZU2 1322 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 ST20-MTHFSA0A0A6YYL1 179 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 GIGYF1O75420 1035 aaPredicted RBP9.86□□□□□ -0.83
LMBR1-221ENST00000609774 NEFMP07197 916 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 EXOC6Q8TAG9 804 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 ARXQ96QS3 562 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 CDK19Q9BWU1 502 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 PCDH10Q9P2E7 1040 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 KIAA1210Q9ULL0 1709 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 ABCC6O95255 1503 aa9.86□□□□□ -0.83
LMBR1-221ENST00000609774 TRPM1Q7Z4N2 1603 aa9.85□□□□□ -0.83
LMBR1-221ENST00000609774 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
LMBR1-221ENST00000609774 SLC16A10Q8TF71 515 aa9.85□□□□□ -0.83
LMBR1-221ENST00000609774 DCAF11Q8TEB1 546 aa9.84□□□□□ -0.83
LMBR1-221ENST00000609774 CARD10Q9BWT7 1032 aa9.84□□□□□ -0.83
LMBR1-221ENST00000609774 OCEL1Q9H607 264 aa9.84□□□□□ -0.83
LMBR1-221ENST00000609774 TMF1P82094 1093 aa9.83□□□□□ -0.84
LMBR1-221ENST00000609774 CNGB1Q14028 1251 aaPredicted RBP9.83□□□□□ -0.84
LMBR1-221ENST00000609774 CDCA8Q53HL2 280 aa9.83□□□□□ -0.84
LMBR1-221ENST00000609774 NUTM2GQ5VZR2 741 aa9.83□□□□□ -0.84
LMBR1-221ENST00000609774 CENPQQ7L2Z9 268 aaPredicted RBP9.83□□□□□ -0.84
LMBR1-221ENST00000609774 USP6P35125 1406 aa9.82□□□□□ -0.84
LMBR1-221ENST00000609774 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
LMBR1-221ENST00000609774 CDAN1Q8IWY9 1227 aa9.82□□□□□ -0.84
LMBR1-221ENST00000609774 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
LMBR1-221ENST00000609774 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
LMBR1-221ENST00000609774 TNS2Q63HR2 1409 aa9.82□□□□□ -0.84
LMBR1-221ENST00000609774 TOM1L2Q6ZVM7 507 aa9.81□□□□□ -0.84
LMBR1-221ENST00000609774 ARHGEF25Q86VW2 580 aa9.81□□□□□ -0.84
LMBR1-221ENST00000609774 NGEFQ8N5V2 710 aa9.81□□□□□ -0.84
LMBR1-221ENST00000609774 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
LMBR1-221ENST00000609774 AXIN2Q9Y2T1 843 aa9.81□□□□□ -0.84
LMBR1-221ENST00000609774 RGPD5Q99666 1765 aa9.8□□□□□ -0.84
LMBR1-221ENST00000609774 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
LMBR1-221ENST00000609774 BTAF1O14981 1849 aa9.8□□□□□ -0.84
LMBR1-221ENST00000609774 EXOC5O00471 708 aa9.8□□□□□ -0.84
LMBR1-221ENST00000609774 PPIP5K1Q6PFW1 1433 aa9.8□□□□□ -0.84
LMBR1-221ENST00000609774 GRIN3BO60391 1043 aa9.79□□□□□ -0.84
LMBR1-221ENST00000609774 WDR43Q15061 677 aaKnown RBP eCLIP9.79□□□□□ -0.84
LMBR1-221ENST00000609774 GPR162Q16538 588 aa9.79□□□□□ -0.84
LMBR1-221ENST00000609774 KCNH5Q8NCM2 988 aa9.79□□□□□ -0.84
LMBR1-221ENST00000609774 QRICH2Q9H0J4 1663 aa9.79□□□□□ -0.84
LMBR1-221ENST00000609774 ADCY9O60503 1353 aa9.78□□□□□ -0.84
LMBR1-221ENST00000609774 USP54Q70EL1 1684 aa9.78□□□□□ -0.84
LMBR1-221ENST00000609774 NLRP6P59044 892 aa9.78□□□□□ -0.84
LMBR1-221ENST00000609774 GSE1Q14687 1217 aa9.78□□□□□ -0.84
LMBR1-221ENST00000609774 FAM161AQ3B820 660 aa9.78□□□□□ -0.84
LMBR1-221ENST00000609774 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
LMBR1-221ENST00000609774 NFAT5O94916 1531 aa9.77□□□□□ -0.84
LMBR1-221ENST00000609774 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
LMBR1-221ENST00000609774 ZNF827Q17R98 1081 aa9.77□□□□□ -0.85
LMBR1-221ENST00000609774 IFNLR1Q8IU57 520 aaPredicted RBP9.77□□□□□ -0.85
LMBR1-221ENST00000609774 CRBNQ96SW2 442 aa9.77□□□□□ -0.85
LMBR1-221ENST00000609774 LAS1LQ9Y4W2 734 aaKnown RBP9.77□□□□□ -0.85
LMBR1-221ENST00000609774 TUBGCP6Q96RT7 1819 aa9.77□□□□□ -0.85
LMBR1-221ENST00000609774 LY75O60449 1722 aa9.76□□□□□ -0.85
LMBR1-221ENST00000609774 HSPA6P17066 643 aa9.76□□□□□ -0.85
LMBR1-221ENST00000609774 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
LMBR1-221ENST00000609774 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
LMBR1-221ENST00000609774 POLD1P28340 1107 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 PSEN1P49768 467 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 GOLGA2Q08379 1002 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 AAMPQ13685 434 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 KNSTRNQ9Y448 316 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 PNPLA7Q6ZV29 1317 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
LMBR1-221ENST00000609774 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
LMBR1-221ENST00000609774 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-221ENST00000609774 DPY19L2Q6NUT2 758 aa9.74□□□□□ -0.85
LMBR1-221ENST00000609774 ZNF467Q7Z7K2 595 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-221ENST00000609774 PANK3Q9H999 370 aa9.74□□□□□ -0.85
LMBR1-221ENST00000609774 SALL2Q9Y467 1007 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-221ENST00000609774 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
LMBR1-221ENST00000609774 YBX3P16989 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
LMBR1-221ENST00000609774 BECN1Q14457 450 aa9.73□□□□□ -0.85
LMBR1-221ENST00000609774 CC2D1BQ5T0F9 858 aaKnown RBP9.73□□□□□ -0.85
LMBR1-221ENST00000609774 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.73□□□□□ -0.85
LMBR1-221ENST00000609774 CABP1Q9NZU7 370 aa9.73□□□□□ -0.85
LMBR1-221ENST00000609774 ERBB3P21860 1342 aa9.73□□□□□ -0.85
LMBR1-221ENST00000609774 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
LMBR1-221ENST00000609774 CENPJQ9HC77 1338 aaPredicted RBP9.73□□□□□ -0.85
LMBR1-221ENST00000609774 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
LMBR1-221ENST00000609774 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
LMBR1-221ENST00000609774 NFKBIBQ15653 356 aa9.72□□□□□ -0.85
LMBR1-221ENST00000609774 NLGN2Q8NFZ4 835 aa9.72□□□□□ -0.85
LMBR1-221ENST00000609774 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
LMBR1-221ENST00000609774 TTC21BQ7Z4L5 1316 aa9.72□□□□□ -0.85
LMBR1-221ENST00000609774 KAT6BQ8WYB5 2073 aa9.71□□□□□ -0.85
LMBR1-221ENST00000609774 IL2RBP14784 551 aa9.71□□□□□ -0.86
LMBR1-221ENST00000609774 HMGB2P26583 209 aaKnown RBP9.71□□□□□ -0.86
LMBR1-221ENST00000609774 TESK2Q96S53 571 aa9.71□□□□□ -0.86
LMBR1-221ENST00000609774 CABP2Q9NPB3 220 aa9.71□□□□□ -0.86
LMBR1-221ENST00000609774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.71□□□□□ -0.86
LMBR1-221ENST00000609774 CD2APQ9Y5K6 639 aa9.71□□□□□ -0.86
LMBR1-221ENST00000609774 MAPK8IP3Q9UPT6 1336 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms