RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 MCM10Q7L590 875 aa18.77■□□□□ 0.6
CTSA-219ENST00000607841 BTAF1O14981 1849 aa18.77■□□□□ 0.59
CTSA-219ENST00000607841 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
CTSA-219ENST00000607841 CCNL1Q9UK58 526 aaPredicted RBP18.76■□□□□ 0.59
CTSA-219ENST00000607841 KAT6BQ8WYB5 2073 aa18.76■□□□□ 0.59
CTSA-219ENST00000607841 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
CTSA-219ENST00000607841 NEUROD2Q15784 382 aa18.75■□□□□ 0.59
CTSA-219ENST00000607841 MRC1P22897 1456 aa18.75■□□□□ 0.59
CTSA-219ENST00000607841 RGPD3A6NKT7 1758 aaPredicted RBP18.75■□□□□ 0.59
CTSA-219ENST00000607841 RGPD4Q7Z3J3 1758 aa18.75■□□□□ 0.59
CTSA-219ENST00000607841 LOC102724428A0A0B4J2F2 783 aa18.74■□□□□ 0.59
CTSA-219ENST00000607841 APAF1O14727 1248 aa18.74■□□□□ 0.59
CTSA-219ENST00000607841 SIK1P57059 783 aa18.74■□□□□ 0.59
CTSA-219ENST00000607841 RRP7AQ9Y3A4 280 aaKnown RBP18.74■□□□□ 0.59
CTSA-219ENST00000607841 ADAMTS7Q9UKP4 1686 aa18.73■□□□□ 0.59
CTSA-219ENST00000607841 BTBD11A6QL63 1104 aa18.73■□□□□ 0.59
CTSA-219ENST00000607841 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
CTSA-219ENST00000607841 MIER1Q8N108 512 aa18.73■□□□□ 0.59
CTSA-219ENST00000607841 ITGB4P16144 1822 aa18.72■□□□□ 0.59
CTSA-219ENST00000607841 TAF7Q15545 349 aaPredicted RBP18.72■□□□□ 0.59
CTSA-219ENST00000607841 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
CTSA-219ENST00000607841 LRRC4BQ9NT99 713 aa18.72■□□□□ 0.59
CTSA-219ENST00000607841 SCN11AQ9UI33 1791 aa18.72■□□□□ 0.59
CTSA-219ENST00000607841 ATP6V1AP38606 617 aa18.71■□□□□ 0.59
CTSA-219ENST00000607841 SLC39A6Q13433 755 aa18.71■□□□□ 0.59
CTSA-219ENST00000607841 STK32BQ9NY57 414 aa18.71■□□□□ 0.59
CTSA-219ENST00000607841 PTCD1O75127 700 aaKnown RBP18.7■□□□□ 0.58
CTSA-219ENST00000607841 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
CTSA-219ENST00000607841 KCNQ4P56696 695 aa18.69■□□□□ 0.58
CTSA-219ENST00000607841 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
CTSA-219ENST00000607841 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
CTSA-219ENST00000607841 TRIM35Q9UPQ4 493 aa18.69■□□□□ 0.58
CTSA-219ENST00000607841 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
CTSA-219ENST00000607841 RREB1Q92766 1687 aa18.68■□□□□ 0.58
CTSA-219ENST00000607841 SLC15A2Q16348 729 aa18.67■□□□□ 0.58
CTSA-219ENST00000607841 VSIG10Q8N0Z9 540 aa18.67■□□□□ 0.58
CTSA-219ENST00000607841 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
CTSA-219ENST00000607841 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
CTSA-219ENST00000607841 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
CTSA-219ENST00000607841 LY75O60449 1722 aa18.66■□□□□ 0.58
CTSA-219ENST00000607841 ITPK1Q13572 414 aa18.65■□□□□ 0.58
CTSA-219ENST00000607841 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
CTSA-219ENST00000607841 CCDC27Q2M243 656 aa18.65■□□□□ 0.58
CTSA-219ENST00000607841 AKT1S1Q96B36 256 aa18.65■□□□□ 0.58
CTSA-219ENST00000607841 SLC4A9Q96Q91 983 aa18.65■□□□□ 0.58
CTSA-219ENST00000607841 ANO8Q9HCE9 1232 aaPredicted RBP18.65■□□□□ 0.58
CTSA-219ENST00000607841 NUP188Q5SRE5 1749 aa18.64■□□□□ 0.57
CTSA-219ENST00000607841 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
CTSA-219ENST00000607841 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
CTSA-219ENST00000607841 TFCP2L1Q9NZI6 479 aa18.64■□□□□ 0.57
CTSA-219ENST00000607841 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.57
CTSA-219ENST00000607841 PSDA5PKW4 1024 aaPredicted RBP18.63■□□□□ 0.57
CTSA-219ENST00000607841 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
CTSA-219ENST00000607841 AK7Q96M32 723 aa18.63■□□□□ 0.57
CTSA-219ENST00000607841 MIS18AQ9NYP9 233 aa18.63■□□□□ 0.57
CTSA-219ENST00000607841 KCNQ3O43525 872 aa18.62■□□□□ 0.57
CTSA-219ENST00000607841 ZNF827Q17R98 1081 aa18.62■□□□□ 0.57
CTSA-219ENST00000607841 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
CTSA-219ENST00000607841 STARD3NLO95772 234 aa18.61■□□□□ 0.57
CTSA-219ENST00000607841 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
CTSA-219ENST00000607841 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
CTSA-219ENST00000607841 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
CTSA-219ENST00000607841 KCPQ6ZWJ8 1503 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 CNTNAP4Q9C0A0 1308 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 CHL1O00533 1208 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 SNRPA1P09661 255 aaKnown RBP18.6■□□□□ 0.57
CTSA-219ENST00000607841 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 FLAD1Q8NFF5 587 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
CTSA-219ENST00000607841 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
CTSA-219ENST00000607841 GNAI1P63096 354 aa18.59■□□□□ 0.57
CTSA-219ENST00000607841 IFT57Q9NWB7 429 aa18.59■□□□□ 0.57
CTSA-219ENST00000607841 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
CTSA-219ENST00000607841 SIPA1L3O60292 1781 aaPredicted RBP18.59■□□□□ 0.57
CTSA-219ENST00000607841 VIRMAQ69YN4 1812 aaKnown RBP18.58■□□□□ 0.57
CTSA-219ENST00000607841 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.57
CTSA-219ENST00000607841 EIF4A1P60842 406 aaKnown RBP18.58■□□□□ 0.56
CTSA-219ENST00000607841 GNPATO15228 680 aa18.57■□□□□ 0.56
CTSA-219ENST00000607841 CYP19A1P11511 503 aaPredicted RBP18.57■□□□□ 0.56
CTSA-219ENST00000607841 CRKLP46109 303 aaKnown RBP18.57■□□□□ 0.56
CTSA-219ENST00000607841 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
CTSA-219ENST00000607841 RTCBQ9Y3I0 505 aaKnown RBP18.57■□□□□ 0.56
CTSA-219ENST00000607841 SSFA2P28290 1259 aa18.56■□□□□ 0.56
CTSA-219ENST00000607841 CCDC87Q9NVE4 849 aa18.56■□□□□ 0.56
CTSA-219ENST00000607841 C5P01031 1676 aa18.56■□□□□ 0.56
CTSA-219ENST00000607841 IL16Q14005 1332 aa18.55■□□□□ 0.56
CTSA-219ENST00000607841 PNPLA7Q6ZV29 1317 aa18.55■□□□□ 0.56
CTSA-219ENST00000607841 RPS6KA4O75676 772 aa18.55■□□□□ 0.56
CTSA-219ENST00000607841 ZNF853P0CG23 659 aa18.55■□□□□ 0.56
CTSA-219ENST00000607841 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
CTSA-219ENST00000607841 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
CTSA-219ENST00000607841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.54■□□□□ 0.56
CTSA-219ENST00000607841 MSH5O43196 834 aa18.54■□□□□ 0.56
CTSA-219ENST00000607841 GIGYF1O75420 1035 aaPredicted RBP18.54■□□□□ 0.56
CTSA-219ENST00000607841 ADRA2BP18089 450 aa18.54■□□□□ 0.56
CTSA-219ENST00000607841 TRAPPC3LQ5T215 181 aa18.54■□□□□ 0.56
CTSA-219ENST00000607841 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
CTSA-219ENST00000607841 SLC16A10Q8TF71 515 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms