RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 DLC1Q96QB1 1528 aa6.44□□□□□ -1.38
SCARNA15-201ENST00000607520 TMEM131LA2VDJ0 1609 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 LAMC1P11047 1609 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 OVOS2A0A0G2JMS6 1433 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 OVOS2A0A0J9YW53 1432 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 OVOS2Q6IE36 1432 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 MTHFSDQ2M296 383 aaKnown RBP6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 DZIP3Q86Y13 1208 aaKnown RBP6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 TRIM34Q9BYJ4 488 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 CNNM1Q9NRU3 951 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 RBM19Q9Y4C8 960 aaKnown RBP6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 CDC42BPGQ6DT37 1551 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 ASXL1Q8IXJ9 1541 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 LOC102724428A0A0B4J2F2 783 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 SIK1P57059 783 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 SLC27A3Q5K4L6 730 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 ZBTB3Q9H5J0 574 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 DEPDC5O75140 1603 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 PLIN1O60240 522 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 PHKG2P15735 406 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 GPTP24298 496 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 G3BP1Q13283 466 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 TXNRD1Q16881 649 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 CLUAP1Q96AJ1 413 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 DDRGK1Q96HY6 314 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 NIP7Q9Y221 180 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 BLMP54132 1417 aaPredicted RBP6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 KIF16BQ96L93 1317 aa6.43□□□□□ -1.38
SCARNA15-201ENST00000607520 MAP3K5Q99683 1374 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 APBB1O00213 710 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 ZKSCAN2Q63HK3 967 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 JDP2Q8WYK2 163 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 WWC3Q9ULE0 1092 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 SETBP1Q9Y6X0 1596 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 H0YIN7 160 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 CCDC57Q2TAC2 916 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 POTEAQ6S8J7 498 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 CASC1Q6TDU7 716 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 WDR63Q8IWG1 891 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 THUMPD2Q9BTF0 503 aaKnown RBP6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 TBC1D2BQ9UPU7 963 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 UBTFL1P0CB47 393 aaPredicted RBP6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 DEFB132Q7Z7B7 95 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 BCL2L13Q9BXK5 485 aa6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 GNL3LQ9NVN8 582 aaKnown RBP6.42□□□□□ -1.38
SCARNA15-201ENST00000607520 MSL1Q68DK7 614 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 PAXIP1Q6ZW49 1069 aaPredicted RBP6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 CNBD1Q8NA66 436 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 SLC52A2Q9HAB3 445 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 IFT57Q9NWB7 429 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 C6orf229H3BNL8 230 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 SRCIN1Q9C0H9 1055 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 BCS1LQ9Y276 419 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 LRRFIP1Q32MZ4 808 aaKnown RBP6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 AMOTL1Q8IY63 956 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 UPF2Q9HAU5 1272 aaKnown RBP6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 RCAN3Q9UKA8 241 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 CLEC11AQ9Y240 323 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 NEURL4Q96JN8 1562 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 MROH1Q8NDA8 1641 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 NRXN1Q9ULB1 1477 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 EIF5BO60841 1220 aaKnown RBP6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 ZBTB7AO95365 584 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 GNAI3P08754 354 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 IL13P35225 146 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 EXOSC9Q06265 439 aaKnown RBP6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 DNAJC10Q8IXB1 793 aa6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 CDC5LQ99459 802 aaKnown RBP6.41□□□□□ -1.38
SCARNA15-201ENST00000607520 SSH2Q76I76 1423 aa6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 UBR1Q8IWV7 1749 aa6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 WDHD1O75717 1129 aaPredicted RBP6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 HSP90AB4PQ58FF6 505 aa6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 ZNF790Q6PG37 636 aa6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 WWC1Q8IX03 1113 aa6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 ANKIB1Q9P2G1 1089 aa6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 AXIN2Q9Y2T1 843 aa6.4□□□□□ -1.38
SCARNA15-201ENST00000607520 USP31Q70CQ4 1352 aa6.4□□□□□ -1.39
SCARNA15-201ENST00000607520 CPSF1Q10570 1443 aaKnown RBP6.4□□□□□ -1.39
SCARNA15-201ENST00000607520 ZNF428Q96B54 188 aa6.4□□□□□ -1.39
SCARNA15-201ENST00000607520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 SLC16A10Q8TF71 515 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 CFAP44Q96MT7 982 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 TMOD2Q9NZR1 351 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 LMOD1P29536 600 aaPredicted RBP6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 PDE6BP35913 854 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 ANKRD13DQ6ZTN6 518 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 ARHGAP27Q6ZUM4 889 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 MYD88Q99836 296 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 UTP14AQ9BVJ6 771 aaKnown RBP6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 NPC1L1Q9UHC9 1359 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 USP19O94966 1318 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 DPY19L2Q6NUT2 758 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 TSR2Q969E8 191 aaKnown RBP6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 PALLDQ8WX93 1383 aa6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 CT47B1P0C2W7 299 aaPredicted RBP6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 RBM5P52756 815 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCARNA15-201ENST00000607520 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms