RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
CTSA-215ENST00000607187 ANO8Q9HCE9 1232 aaPredicted RBP13.5□□□□□ -0.25
CTSA-215ENST00000607187 SULT6B1Q6IMI4 303 aa13.49□□□□□ -0.25
CTSA-215ENST00000607187 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
CTSA-215ENST00000607187 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
CTSA-215ENST00000607187 PHKG2P15735 406 aa13.48□□□□□ -0.25
CTSA-215ENST00000607187 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
CTSA-215ENST00000607187 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
CTSA-215ENST00000607187 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
CTSA-215ENST00000607187 AMOTQ4VCS5 1084 aa13.47□□□□□ -0.25
CTSA-215ENST00000607187 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
CTSA-215ENST00000607187 SLC27A3Q5K4L6 730 aa13.47□□□□□ -0.25
CTSA-215ENST00000607187 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.25
CTSA-215ENST00000607187 SLC15A2Q16348 729 aa13.46□□□□□ -0.25
CTSA-215ENST00000607187 MPRIPQ6WCQ1 1025 aa13.46□□□□□ -0.25
CTSA-215ENST00000607187 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.26
CTSA-215ENST00000607187 QSER1Q2KHR3 1735 aa13.45□□□□□ -0.26
CTSA-215ENST00000607187 DSG3P32926 999 aa13.45□□□□□ -0.26
CTSA-215ENST00000607187 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
CTSA-215ENST00000607187 TUBGCP6Q96RT7 1819 aa13.44□□□□□ -0.26
CTSA-215ENST00000607187 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
CTSA-215ENST00000607187 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
CTSA-215ENST00000607187 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
CTSA-215ENST00000607187 PIGBQ92521 554 aa13.44□□□□□ -0.26
CTSA-215ENST00000607187 SCN11AQ9UI33 1791 aa13.44□□□□□ -0.26
CTSA-215ENST00000607187 HMOX1P09601 288 aa13.43□□□□□ -0.26
CTSA-215ENST00000607187 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
CTSA-215ENST00000607187 KCNQ4P56696 695 aa13.43□□□□□ -0.26
CTSA-215ENST00000607187 ZNF827Q17R98 1081 aa13.43□□□□□ -0.26
CTSA-215ENST00000607187 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
CTSA-215ENST00000607187 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
CTSA-215ENST00000607187 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
CTSA-215ENST00000607187 C5P01031 1676 aa13.43□□□□□ -0.26
CTSA-215ENST00000607187 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
CTSA-215ENST00000607187 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
CTSA-215ENST00000607187 ERVV-2B6SEH9 535 aa13.42□□□□□ -0.26
CTSA-215ENST00000607187 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
CTSA-215ENST00000607187 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
CTSA-215ENST00000607187 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
CTSA-215ENST00000607187 CCNL1Q9UK58 526 aaPredicted RBP13.42□□□□□ -0.26
CTSA-215ENST00000607187 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
CTSA-215ENST00000607187 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
CTSA-215ENST00000607187 SPON1Q9HCB6 807 aa13.4□□□□□ -0.26
CTSA-215ENST00000607187 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
CTSA-215ENST00000607187 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
CTSA-215ENST00000607187 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
CTSA-215ENST00000607187 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
CTSA-215ENST00000607187 ZNF831Q5JPB2 1677 aa13.38□□□□□ -0.27
CTSA-215ENST00000607187 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
CTSA-215ENST00000607187 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
CTSA-215ENST00000607187 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
CTSA-215ENST00000607187 GSE1Q14687 1217 aa13.38□□□□□ -0.27
CTSA-215ENST00000607187 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
CTSA-215ENST00000607187 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
CTSA-215ENST00000607187 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
CTSA-215ENST00000607187 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
CTSA-215ENST00000607187 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
CTSA-215ENST00000607187 SIK1P57059 783 aa13.37□□□□□ -0.27
CTSA-215ENST00000607187 CABP4P57796 275 aa13.37□□□□□ -0.27
CTSA-215ENST00000607187 TFCP2L1Q9NZI6 479 aa13.37□□□□□ -0.27
CTSA-215ENST00000607187 NUDCQ9Y266 331 aa13.37□□□□□ -0.27
CTSA-215ENST00000607187 PNPLA7Q6ZV29 1317 aa13.37□□□□□ -0.27
CTSA-215ENST00000607187 COL24A1Q17RW2 1714 aa13.36□□□□□ -0.27
CTSA-215ENST00000607187 UBR3Q6ZT12 1888 aa13.36□□□□□ -0.27
CTSA-215ENST00000607187 MTFR1LQ9H019 292 aa13.36□□□□□ -0.27
CTSA-215ENST00000607187 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
CTSA-215ENST00000607187 RALBP1Q15311 655 aa13.35□□□□□ -0.27
CTSA-215ENST00000607187 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
CTSA-215ENST00000607187 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
CTSA-215ENST00000607187 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
CTSA-215ENST00000607187 MRC1P22897 1456 aa13.35□□□□□ -0.27
CTSA-215ENST00000607187 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
CTSA-215ENST00000607187 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
CTSA-215ENST00000607187 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
CTSA-215ENST00000607187 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
CTSA-215ENST00000607187 PTGER2P43116 358 aa13.34□□□□□ -0.27
CTSA-215ENST00000607187 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
CTSA-215ENST00000607187 GAS2L2Q8NHY3 880 aa13.34□□□□□ -0.27
CTSA-215ENST00000607187 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
CTSA-215ENST00000607187 FCHSD2O94868 740 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 ATP6V1AP38606 617 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 ITPK1Q13572 414 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 SLC4A9Q96Q91 983 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 SGIP1Q9BQI5 828 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
CTSA-215ENST00000607187 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
CTSA-215ENST00000607187 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
CTSA-215ENST00000607187 COL23A1Q86Y22 540 aaPredicted RBP13.32□□□□□ -0.28
CTSA-215ENST00000607187 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
CTSA-215ENST00000607187 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
CTSA-215ENST00000607187 UTRNP46939 3433 aa13.32□□□□□ -0.28
CTSA-215ENST00000607187 MAP3K5Q99683 1374 aa13.32□□□□□ -0.28
CTSA-215ENST00000607187 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
CTSA-215ENST00000607187 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
CTSA-215ENST00000607187 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
CTSA-215ENST00000607187 AMIGO3Q86WK7 504 aa13.31□□□□□ -0.28
CTSA-215ENST00000607187 AK7Q96M32 723 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 392.5 ms