RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 PALLDQ8WX93 1383 aa9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 BTBD11A6QL63 1104 aa9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 DEFB132Q7Z7B7 95 aa9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 RRP7AQ9Y3A4 280 aaKnown RBP9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 ADAMTS7Q9UKP4 1686 aa9.8□□□□□ -0.84
CUX2P1-201ENST00000606426 DCTN1Q14203 1278 aa9.79□□□□□ -0.84
CUX2P1-201ENST00000606426 TXNRD1Q16881 649 aa9.79□□□□□ -0.84
CUX2P1-201ENST00000606426 NBPF14Q5TI25 921 aa9.79□□□□□ -0.84
CUX2P1-201ENST00000606426 PTF1AQ7RTS3 328 aa9.79□□□□□ -0.84
CUX2P1-201ENST00000606426 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
CUX2P1-201ENST00000606426 ASAP1Q9ULH1 1129 aa9.79□□□□□ -0.84
CUX2P1-201ENST00000606426 TRIM35Q9UPQ4 493 aa9.79□□□□□ -0.84
CUX2P1-201ENST00000606426 RGPD3A6NKT7 1758 aaPredicted RBP9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 RGPD4Q7Z3J3 1758 aa9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 SCN11AQ9UI33 1791 aa9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 LOC102724428A0A0B4J2F2 783 aa9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 SIK1P57059 783 aa9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 EZH2Q15910 746 aaKnown RBP9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 ZNF790Q6PG37 636 aa9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 FMNL2Q96PY5 1086 aa9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 CCNL1Q9UK58 526 aaPredicted RBP9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 TNS1Q9HBL0 1735 aaKnown RBP9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 TOGARAM1Q9Y4F4 1720 aa9.78□□□□□ -0.84
CUX2P1-201ENST00000606426 GNAI1P63096 354 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 WDR63Q8IWG1 891 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 WWC1Q8IX03 1113 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 RBM42Q9BTD8 480 aaKnown RBP9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 IFT57Q9NWB7 429 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 KAT6BQ8WYB5 2073 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 IL16Q14005 1332 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 BTAF1O14981 1849 aa9.77□□□□□ -0.85
CUX2P1-201ENST00000606426 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
CUX2P1-201ENST00000606426 THUMPD2Q9BTF0 503 aaKnown RBP9.76□□□□□ -0.85
CUX2P1-201ENST00000606426 TSPYL4Q9UJ04 414 aa9.76□□□□□ -0.85
CUX2P1-201ENST00000606426 ITGB4P16144 1822 aa9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 CHL1O00533 1208 aa9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 PTCD1O75127 700 aaKnown RBP9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 SNRPA1P09661 255 aaKnown RBP9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 SLC39A6Q13433 755 aa9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 PROM2Q8N271 834 aa9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 CHMP4AQ9BY43 222 aa9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 STK32BQ9NY57 414 aa9.75□□□□□ -0.85
CUX2P1-201ENST00000606426 STARD3NLO95772 234 aa9.74□□□□□ -0.85
CUX2P1-201ENST00000606426 LRRC4BQ9NT99 713 aa9.74□□□□□ -0.85
CUX2P1-201ENST00000606426 LAS1LQ9Y4W2 734 aaKnown RBP9.74□□□□□ -0.85
CUX2P1-201ENST00000606426 HEG1Q9ULI3 1381 aa9.74□□□□□ -0.85
CUX2P1-201ENST00000606426 HOXB7P09629 217 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 ZNF853P0CG23 659 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 EIF4A1P60842 406 aaKnown RBP9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 RC3H1Q5TC82 1133 aaKnown RBP9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 FLAD1Q8NFF5 587 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 ZNF496Q96IT1 587 aaPredicted RBP9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 AK7Q96M32 723 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 SALL2Q9Y467 1007 aaPredicted RBP9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 DLG5Q8TDM6 1919 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 SOS1Q07889 1333 aaPredicted RBP9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 LY75O60449 1722 aa9.73□□□□□ -0.85
CUX2P1-201ENST00000606426 KCPQ6ZWJ8 1503 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 PAPPAQ13219 1627 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 ZNF831Q5JPB2 1677 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 GOLGA2Q08379 1002 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 SLC15A2Q16348 729 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 MIS18AQ9NYP9 233 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 ZNF521Q96K83 1311 aa9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 SIPA1L3O60292 1781 aaPredicted RBP9.72□□□□□ -0.85
CUX2P1-201ENST00000606426 RREB1Q92766 1687 aa9.71□□□□□ -0.85
CUX2P1-201ENST00000606426 E9PSI1 815 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 KCNQ3O43525 872 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 ADRA2BP18089 450 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 HNRNPUQ00839 825 aaKnown RBP eCLIP9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 ITPK1Q13572 414 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 NPM2Q86SE8 214 aaKnown RBP9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 DNAJC10Q8IXB1 793 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 LINC00116Q8NCU8 138 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 AKT1S1Q96B36 256 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 SLC4A9Q96Q91 983 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.86
CUX2P1-201ENST00000606426 CYP19A1P11511 503 aaPredicted RBP9.7□□□□□ -0.86
CUX2P1-201ENST00000606426 RTCBQ9Y3I0 505 aaKnown RBP9.7□□□□□ -0.86
CUX2P1-201ENST00000606426 ERBB4Q15303 1308 aa9.7□□□□□ -0.86
CUX2P1-201ENST00000606426 VIRMAQ69YN4 1812 aaKnown RBP9.7□□□□□ -0.86
CUX2P1-201ENST00000606426 RPS6KA4O75676 772 aa9.69□□□□□ -0.86
CUX2P1-201ENST00000606426 SSFA2P28290 1259 aa9.69□□□□□ -0.86
CUX2P1-201ENST00000606426 CRKLP46109 303 aaKnown RBP9.69□□□□□ -0.86
CUX2P1-201ENST00000606426 KCNQ4P56696 695 aa9.69□□□□□ -0.86
CUX2P1-201ENST00000606426 UBR2Q8IWV8 1755 aa9.69□□□□□ -0.86
CUX2P1-201ENST00000606426 CICQ96RK0 1608 aaPredicted RBP9.69□□□□□ -0.86
CUX2P1-201ENST00000606426 CCDC87Q9NVE4 849 aa9.69□□□□□ -0.86
CUX2P1-201ENST00000606426 NUP188Q5SRE5 1749 aa9.68□□□□□ -0.86
CUX2P1-201ENST00000606426 C5P01031 1676 aa9.68□□□□□ -0.86
CUX2P1-201ENST00000606426 ZBED9Q6R2W3 1325 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms