RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
CTSA-211ENST00000606066 PIGBQ92521 554 aa18.85■□□□□ 0.61
CTSA-211ENST00000606066 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
CTSA-211ENST00000606066 SBF2Q86WG5 1849 aa18.84■□□□□ 0.61
CTSA-211ENST00000606066 NFE2L2Q16236 605 aa18.84■□□□□ 0.61
CTSA-211ENST00000606066 ZNF784Q8NCA9 323 aaPredicted RBP18.84■□□□□ 0.61
CTSA-211ENST00000606066 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
CTSA-211ENST00000606066 ARXQ96QS3 562 aa18.84■□□□□ 0.61
CTSA-211ENST00000606066 LGR6Q9HBX8 967 aa18.84■□□□□ 0.61
CTSA-211ENST00000606066 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
CTSA-211ENST00000606066 DOT1LQ8TEK3 1739 aa18.83■□□□□ 0.6
CTSA-211ENST00000606066 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
CTSA-211ENST00000606066 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
CTSA-211ENST00000606066 SLC16A10Q8TF71 515 aa18.82■□□□□ 0.6
CTSA-211ENST00000606066 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
CTSA-211ENST00000606066 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
CTSA-211ENST00000606066 CASZ1Q86V15 1759 aa18.81■□□□□ 0.6
CTSA-211ENST00000606066 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
CTSA-211ENST00000606066 TEFQ10587 303 aa18.81■□□□□ 0.6
CTSA-211ENST00000606066 SLC27A3Q5K4L6 730 aa18.81■□□□□ 0.6
CTSA-211ENST00000606066 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
CTSA-211ENST00000606066 LMOD3Q0VAK6 560 aa18.8■□□□□ 0.6
CTSA-211ENST00000606066 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
CTSA-211ENST00000606066 TMPOP42166 694 aaKnown RBP18.79■□□□□ 0.6
CTSA-211ENST00000606066 RIPK4P57078 832 aa18.79■□□□□ 0.6
CTSA-211ENST00000606066 PALLDQ8WX93 1383 aa18.79■□□□□ 0.6
CTSA-211ENST00000606066 ZNF827Q17R98 1081 aa18.78■□□□□ 0.6
CTSA-211ENST00000606066 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
CTSA-211ENST00000606066 ASAP1Q9ULH1 1129 aa18.78■□□□□ 0.6
CTSA-211ENST00000606066 CEMIPQ8WUJ3 1361 aa18.78■□□□□ 0.6
CTSA-211ENST00000606066 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
CTSA-211ENST00000606066 MCM10Q7L590 875 aa18.77■□□□□ 0.6
CTSA-211ENST00000606066 BTAF1O14981 1849 aa18.77■□□□□ 0.59
CTSA-211ENST00000606066 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
CTSA-211ENST00000606066 CCNL1Q9UK58 526 aaPredicted RBP18.76■□□□□ 0.59
CTSA-211ENST00000606066 KAT6BQ8WYB5 2073 aa18.76■□□□□ 0.59
CTSA-211ENST00000606066 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
CTSA-211ENST00000606066 NEUROD2Q15784 382 aa18.75■□□□□ 0.59
CTSA-211ENST00000606066 MRC1P22897 1456 aa18.75■□□□□ 0.59
CTSA-211ENST00000606066 LOC102724428A0A0B4J2F2 783 aa18.74■□□□□ 0.59
CTSA-211ENST00000606066 APAF1O14727 1248 aa18.74■□□□□ 0.59
CTSA-211ENST00000606066 SIK1P57059 783 aa18.74■□□□□ 0.59
CTSA-211ENST00000606066 RRP7AQ9Y3A4 280 aaKnown RBP18.74■□□□□ 0.59
CTSA-211ENST00000606066 ADAMTS7Q9UKP4 1686 aa18.73■□□□□ 0.59
CTSA-211ENST00000606066 BTBD11A6QL63 1104 aa18.73■□□□□ 0.59
CTSA-211ENST00000606066 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
CTSA-211ENST00000606066 MIER1Q8N108 512 aa18.73■□□□□ 0.59
CTSA-211ENST00000606066 ITGB4P16144 1822 aa18.72■□□□□ 0.59
CTSA-211ENST00000606066 GOLGB1Q14789 3259 aaKnown RBP18.72■□□□□ 0.59
CTSA-211ENST00000606066 POLD1P28340 1107 aa18.72■□□□□ 0.59
CTSA-211ENST00000606066 TAF7Q15545 349 aaPredicted RBP18.72■□□□□ 0.59
CTSA-211ENST00000606066 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
CTSA-211ENST00000606066 SCN11AQ9UI33 1791 aa18.72■□□□□ 0.59
CTSA-211ENST00000606066 ATP6V1AP38606 617 aa18.71■□□□□ 0.59
CTSA-211ENST00000606066 SLC39A6Q13433 755 aa18.71■□□□□ 0.59
CTSA-211ENST00000606066 PNPLA7Q6ZV29 1317 aa18.71■□□□□ 0.59
CTSA-211ENST00000606066 PTCD1O75127 700 aaKnown RBP18.7■□□□□ 0.58
CTSA-211ENST00000606066 C1QTNF8P60827 252 aa18.7■□□□□ 0.58
CTSA-211ENST00000606066 GPR162Q16538 588 aa18.7■□□□□ 0.58
CTSA-211ENST00000606066 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
CTSA-211ENST00000606066 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
CTSA-211ENST00000606066 KCNQ4P56696 695 aa18.69■□□□□ 0.58
CTSA-211ENST00000606066 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
CTSA-211ENST00000606066 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
CTSA-211ENST00000606066 TRIM35Q9UPQ4 493 aa18.69■□□□□ 0.58
CTSA-211ENST00000606066 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
CTSA-211ENST00000606066 VSIG10Q8N0Z9 540 aa18.67■□□□□ 0.58
CTSA-211ENST00000606066 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
CTSA-211ENST00000606066 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
CTSA-211ENST00000606066 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
CTSA-211ENST00000606066 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
CTSA-211ENST00000606066 LY75O60449 1722 aa18.66■□□□□ 0.58
CTSA-211ENST00000606066 ITPK1Q13572 414 aa18.65■□□□□ 0.58
CTSA-211ENST00000606066 CCDC27Q2M243 656 aa18.65■□□□□ 0.58
CTSA-211ENST00000606066 SLC4A9Q96Q91 983 aa18.65■□□□□ 0.58
CTSA-211ENST00000606066 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
CTSA-211ENST00000606066 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
CTSA-211ENST00000606066 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.57
CTSA-211ENST00000606066 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
CTSA-211ENST00000606066 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
CTSA-211ENST00000606066 AK7Q96M32 723 aa18.63■□□□□ 0.57
CTSA-211ENST00000606066 MIS18AQ9NYP9 233 aa18.63■□□□□ 0.57
CTSA-211ENST00000606066 KCNQ3O43525 872 aa18.62■□□□□ 0.57
CTSA-211ENST00000606066 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
CTSA-211ENST00000606066 STARD3NLO95772 234 aa18.61■□□□□ 0.57
CTSA-211ENST00000606066 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
CTSA-211ENST00000606066 COL23A1Q86Y22 540 aaPredicted RBP18.61■□□□□ 0.57
CTSA-211ENST00000606066 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
CTSA-211ENST00000606066 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
CTSA-211ENST00000606066 KCPQ6ZWJ8 1503 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 CNTNAP4Q9C0A0 1308 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 CHL1O00533 1208 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 SNRPA1P09661 255 aaKnown RBP18.6■□□□□ 0.57
CTSA-211ENST00000606066 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 FLAD1Q8NFF5 587 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 NLGN2Q8NFZ4 835 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
CTSA-211ENST00000606066 GNAI1P63096 354 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms