RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 MEIS3Q99687 375 aa24.78■■□□□ 1.56
MMP28-201ENST00000605424 HMMRO75330 724 aa24.77■■□□□ 1.56
MMP28-201ENST00000605424 SLC4A3P48751 1232 aa24.77■■□□□ 1.56
MMP28-201ENST00000605424 CADPS2Q86UW7 1296 aa24.77■■□□□ 1.56
MMP28-201ENST00000605424 PXDNLA1KZ92 1463 aa24.77■■□□□ 1.56
MMP28-201ENST00000605424 EIF5BO60841 1220 aaKnown RBP24.76■■□□□ 1.55
MMP28-201ENST00000605424 KDM3BQ7LBC6 1761 aa24.76■■□□□ 1.55
MMP28-201ENST00000605424 ZNF530Q6P9A1 599 aaPredicted RBP24.76■■□□□ 1.55
MMP28-201ENST00000605424 C22orf23Q9BZE7 217 aa24.75■■□□□ 1.55
MMP28-201ENST00000605424 FKBP5Q13451 457 aaPredicted RBP24.74■■□□□ 1.55
MMP28-201ENST00000605424 C1orf141Q5JVX7 400 aa24.74■■□□□ 1.55
MMP28-201ENST00000605424 SLC4A10Q6U841 1118 aa24.74■■□□□ 1.55
MMP28-201ENST00000605424 N4BP2Q86UW6 1770 aaPredicted RBP24.74■■□□□ 1.55
MMP28-201ENST00000605424 GNAI3P08754 354 aa24.74■■□□□ 1.55
MMP28-201ENST00000605424 EIF4A1P60842 406 aaKnown RBP24.74■■□□□ 1.55
MMP28-201ENST00000605424 TEFQ10587 303 aa24.74■■□□□ 1.55
MMP28-201ENST00000605424 F6X3S4 739 aa24.73■■□□□ 1.55
MMP28-201ENST00000605424 HDGFL1Q5TGJ6 251 aa24.73■■□□□ 1.55
MMP28-201ENST00000605424 LGR6Q9HBX8 967 aa24.73■■□□□ 1.55
MMP28-201ENST00000605424 NPHP3Q7Z494 1330 aa24.73■■□□□ 1.55
MMP28-201ENST00000605424 GNAI2P04899 355 aa24.73■■□□□ 1.55
MMP28-201ENST00000605424 MFAP1P55081 439 aaKnown RBP24.73■■□□□ 1.55
MMP28-201ENST00000605424 PLEKHG2Q9H7P9 1386 aa24.71■■□□□ 1.55
MMP28-201ENST00000605424 AXIN2Q9Y2T1 843 aa24.71■■□□□ 1.55
MMP28-201ENST00000605424 ERBB3P21860 1342 aa24.71■■□□□ 1.55
MMP28-201ENST00000605424 RNMTO43148 476 aaKnown RBP24.71■■□□□ 1.55
MMP28-201ENST00000605424 ABCC6O95255 1503 aa24.7■■□□□ 1.55
MMP28-201ENST00000605424 PLEKHM2Q8IWE5 1019 aa24.7■■□□□ 1.54
MMP28-201ENST00000605424 SLAIN2Q9P270 581 aa24.7■■□□□ 1.54
MMP28-201ENST00000605424 CERKQ8TCT0 537 aa24.69■■□□□ 1.54
MMP28-201ENST00000605424 BTBD11A6QL63 1104 aa24.69■■□□□ 1.54
MMP28-201ENST00000605424 RBM25P49756 843 aaKnown RBP24.69■■□□□ 1.54
MMP28-201ENST00000605424 DDX17Q92841 729 aaKnown RBP24.67■■□□□ 1.54
MMP28-201ENST00000605424 MPRIPQ6WCQ1 1025 aa24.67■■□□□ 1.54
MMP28-201ENST00000605424 TNS3Q68CZ2 1445 aa24.66■■□□□ 1.54
MMP28-201ENST00000605424 ADAMTS7Q9UKP4 1686 aa24.66■■□□□ 1.54
MMP28-201ENST00000605424 PXDNQ92626 1479 aa24.66■■□□□ 1.54
MMP28-201ENST00000605424 NECTIN2Q92692 538 aa24.66■■□□□ 1.54
MMP28-201ENST00000605424 RGPD5Q99666 1765 aa24.65■■□□□ 1.54
MMP28-201ENST00000605424 ZC3H6P61129 1189 aaKnown RBP24.65■■□□□ 1.54
MMP28-201ENST00000605424 BRINP3Q76B58 766 aa24.65■■□□□ 1.54
MMP28-201ENST00000605424 CDC45O75419 566 aa24.64■■□□□ 1.53
MMP28-201ENST00000605424 TTC22Q5TAA0 569 aa24.64■■□□□ 1.53
MMP28-201ENST00000605424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.64■■□□□ 1.53
MMP28-201ENST00000605424 TBC1D2Q9BYX2 928 aa24.63■■□□□ 1.53
MMP28-201ENST00000605424 COL18A1P39060 1754 aa24.63■■□□□ 1.53
MMP28-201ENST00000605424 HEG1Q9ULI3 1381 aa24.63■■□□□ 1.53
MMP28-201ENST00000605424 ATP8B2P98198 1209 aa24.63■■□□□ 1.53
MMP28-201ENST00000605424 RAPGEF4Q8WZA2 1011 aa24.63■■□□□ 1.53
MMP28-201ENST00000605424 PLEKHG5O94827 1062 aa24.62■■□□□ 1.53
MMP28-201ENST00000605424 TBC1D9Q6ZT07 1266 aa24.62■■□□□ 1.53
MMP28-201ENST00000605424 SPATA31A3Q5VYP0 1347 aa24.61■■□□□ 1.53
MMP28-201ENST00000605424 SIPA1L3O60292 1781 aaPredicted RBP24.61■■□□□ 1.53
MMP28-201ENST00000605424 GSPT1P15170 499 aaKnown RBP24.61■■□□□ 1.53
MMP28-201ENST00000605424 EIF2S2P20042 333 aaKnown RBP24.61■■□□□ 1.53
MMP28-201ENST00000605424 PHAXQ9H814 394 aaKnown RBP24.61■■□□□ 1.53
MMP28-201ENST00000605424 NFKBIBQ15653 356 aa24.6■■□□□ 1.53
MMP28-201ENST00000605424 OSBPL3Q9H4L5 887 aa24.6■■□□□ 1.53
MMP28-201ENST00000605424 DBF4Q9UBU7 674 aaPredicted RBP24.6■■□□□ 1.53
MMP28-201ENST00000605424 CPDO75976 1380 aa24.6■■□□□ 1.53
MMP28-201ENST00000605424 SRCIN1Q9C0H9 1055 aa24.59■■□□□ 1.53
MMP28-201ENST00000605424 USP44Q9H0E7 712 aa24.59■■□□□ 1.53
MMP28-201ENST00000605424 CRYBG1Q9Y4K1 1723 aa24.59■■□□□ 1.53
MMP28-201ENST00000605424 KCNQ3O43525 872 aa24.59■■□□□ 1.53
MMP28-201ENST00000605424 TATP17735 454 aaPredicted RBP24.59■■□□□ 1.53
MMP28-201ENST00000605424 CHPF2Q9P2E5 772 aa24.59■■□□□ 1.53
MMP28-201ENST00000605424 SPG7Q9UQ90 795 aa24.59■■□□□ 1.53
MMP28-201ENST00000605424 UBTFL1P0CB47 393 aaPredicted RBP24.58■■□□□ 1.53
MMP28-201ENST00000605424 C16orf71Q8IYS4 520 aaPredicted RBP24.58■■□□□ 1.53
MMP28-201ENST00000605424 UBAP1LF5GYI3 381 aa24.57■■□□□ 1.52
MMP28-201ENST00000605424 GIGYF1O75420 1035 aaPredicted RBP24.57■■□□□ 1.52
MMP28-201ENST00000605424 NLRP2Q9NX02 1062 aa24.57■■□□□ 1.52
MMP28-201ENST00000605424 PIP4K2BP78356 416 aa24.56■■□□□ 1.52
MMP28-201ENST00000605424 DNAAF4Q8WXU2 420 aa24.56■■□□□ 1.52
MMP28-201ENST00000605424 SNX21Q969T3 373 aa24.56■■□□□ 1.52
MMP28-201ENST00000605424 LRRFIP2Q9Y608 721 aaKnown RBP24.55■■□□□ 1.52
MMP28-201ENST00000605424 SMARCA5O60264 1052 aaPredicted RBP24.54■■□□□ 1.52
MMP28-201ENST00000605424 CASC1Q6TDU7 716 aa24.54■■□□□ 1.52
MMP28-201ENST00000605424 LRRCC1Q9C099 1032 aa24.54■■□□□ 1.52
MMP28-201ENST00000605424 ANTXR1Q9H6X2 564 aa24.54■■□□□ 1.52
MMP28-201ENST00000605424 IBTKQ9P2D0 1353 aaPredicted RBP24.54■■□□□ 1.52
MMP28-201ENST00000605424 TOM1O60784 492 aa24.53■■□□□ 1.52
MMP28-201ENST00000605424 BEND3Q5T5X7 828 aa24.53■■□□□ 1.52
MMP28-201ENST00000605424 ROBO1Q9Y6N7 1651 aa24.53■■□□□ 1.52
MMP28-201ENST00000605424 SCN11AQ9UI33 1791 aa24.53■■□□□ 1.52
MMP28-201ENST00000605424 HSCBQ8IWL3 235 aa24.53■■□□□ 1.52
MMP28-201ENST00000605424 SSH3Q8TE77 659 aa24.53■■□□□ 1.52
MMP28-201ENST00000605424 PNMA6EA0A0J9YXQ4 647 aa24.52■■□□□ 1.52
MMP28-201ENST00000605424 PI4KAP2A4QPH2 592 aa24.52■■□□□ 1.52
MMP28-201ENST00000605424 CSB-PGBD3P0DP91 1061 aa24.52■■□□□ 1.52
MMP28-201ENST00000605424 PHKG2P15735 406 aa24.52■■□□□ 1.52
MMP28-201ENST00000605424 DEKP35659 375 aaKnown RBP24.52■■□□□ 1.52
MMP28-201ENST00000605424 IFNL2Q8IZJ0 200 aa24.52■■□□□ 1.52
MMP28-201ENST00000605424 PI4KAP1Q8N8J0 262 aa24.52■■□□□ 1.52
MMP28-201ENST00000605424 HYPKQ9NX55 129 aa24.52■■□□□ 1.52
MMP28-201ENST00000605424 APBB1O00213 710 aa24.51■■□□□ 1.51
MMP28-201ENST00000605424 OTUD7AQ8TE49 926 aaPredicted RBP24.51■■□□□ 1.51
MMP28-201ENST00000605424 SLC52A2Q9HAB3 445 aa24.51■■□□□ 1.51
MMP28-201ENST00000605424 PDE1AP54750 535 aa24.51■■□□□ 1.51
MMP28-201ENST00000605424 HDAC5Q9UQL6 1122 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms