RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 hCG_2014768A0A024R1R8 64 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 KLHL33A6NCF5 533 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 TPM3P06753 285 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 KCNJ4P48050 445 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 IFT88Q13099 833 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 MIER1Q8N108 512 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 SENP7Q9BQF6 1050 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 KIF27Q86VH2 1401 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 CC2D1AQ6P1N0 951 aaPredicted RBP7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 RPS6KC1Q96S38 1066 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 PAGR1Q9BTK6 254 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 SWAP70Q9UH65 585 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 COL22A1Q8NFW1 1626 aaPredicted RBP7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 ABL2P42684 1182 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 ABCF2Q9UG63 623 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 LMTK2Q8IWU2 1503 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 HDLBPQ00341 1268 aaKnown RBP7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 DONSONQ9NYP3 566 aa7.09□□□□□ -1.27
COL4A3BP-207ENST00000604926 TNNT1P13805 278 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 CASQ1P31415 396 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 PROSER2Q86WR7 435 aaPredicted RBP7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 TAF4BQ92750 862 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 NUCKS1Q9H1E3 243 aaKnown RBP7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 CBFA2T2O43439 604 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 PSMC1P62191 440 aaKnown RBP7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 MECOMQ03112 1051 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 LONRF1Q17RB8 773 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 PNISRQ8TF01 805 aaKnown RBP7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 DUSP9Q99956 384 aaKnown RBP7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 SUN2Q9UH99 717 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 RABL2BQ9UNT1 228 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 MARF1Q9Y4F3 1742 aaKnown RBP7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 ECEL1O95672 775 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 PSMD2Q13200 908 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 NAALADL2Q58DX5 795 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 PHC3Q8NDX5 983 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 MUC3BQ9H195 1237 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 RETREG1Q9H6L5 497 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 RMI1Q9H9A7 625 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 ZNF232Q9UNY5 417 aa7.08□□□□□ -1.28
COL4A3BP-207ENST00000604926 GTPBP6O43824 516 aaPredicted RBP7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 RRM1P23921 792 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 TBX4P57082 545 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 CDC37Q16543 378 aaPredicted RBP7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 L1TD1Q5T7N2 865 aaKnown RBP7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 SPACA7Q96KW9 195 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 CFAP53Q96M91 514 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 CD109Q6YHK3 1445 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 FGD6Q6ZV73 1430 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 FAM163BP0C2L3 166 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 LRCH2Q5VUJ6 765 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 LARP1BQ659C4 914 aaKnown RBP7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 FRAT1Q92837 279 aaPredicted RBP7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 ZNF396Q96N95 335 aaPredicted RBP7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 FMNL2Q96PY5 1086 aa7.07□□□□□ -1.28
COL4A3BP-207ENST00000604926 HOXA2O43364 376 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 PEX19P40855 299 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 PTPROQ16827 1216 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 CCDC47Q96A33 483 aaKnown RBP7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 NCOA3Q9Y6Q9 1424 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 IGBP1P78318 339 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 CCDC15Q0P6D6 951 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 NGDNQ8NEJ9 315 aaKnown RBP7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 ZNF512BQ96KM6 892 aaPredicted RBP7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 DYTNA2CJ06 578 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 VDRP11473 427 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 CDC37L1Q7L3B6 337 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 DZIP3Q86Y13 1208 aaKnown RBP7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 FNBP4Q8N3X1 1017 aaPredicted RBP7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 UNC13BO14795 1591 aa7.06□□□□□ -1.28
COL4A3BP-207ENST00000604926 PIK3C2BO00750 1634 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 C9orf84Q5VXU9 1444 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 TIMM44O43615 452 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 ZSCAN30Q86W11 494 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 UHMK1Q8TAS1 419 aaKnown RBP7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 C8orf37Q96NL8 207 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 KCNA2P16389 499 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 NLGN1Q8N2Q7 840 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 PLEKHG3A1L390 1219 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 SEMA3EO15041 775 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 KIF1CO43896 1103 aaKnown RBP7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 MTERF4Q7Z6M4 381 aaKnown RBP7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 SCYL1Q96KG9 808 aa7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 CDC5LQ99459 802 aaKnown RBP7.05□□□□□ -1.28
COL4A3BP-207ENST00000604926 AKNAQ7Z591 1439 aa7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 ATP10BO94823 1461 aa7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 ZNF16P17020 682 aaPredicted RBP7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 GTF2A1P52655 376 aaPredicted RBP7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 MCM6Q14566 821 aa7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 KLHL23Q8NBE8 558 aa7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 NOL10Q9BSC4 688 aaKnown RBP7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 SFMBT1Q9UHJ3 866 aa7.04□□□□□ -1.28
COL4A3BP-207ENST00000604926 EIF5P55010 431 aaKnown RBP7.03□□□□□ -1.28
COL4A3BP-207ENST00000604926 INHBEP58166 350 aa7.03□□□□□ -1.28
COL4A3BP-207ENST00000604926 CYB5RLQ6IPT4 315 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms