RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
SQSTM1P1-201ENST00000603451 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
SQSTM1P1-201ENST00000603451 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
SQSTM1P1-201ENST00000603451 PALLDQ8WX93 1383 aa12.48□□□□□ -0.41
SQSTM1P1-201ENST00000603451 KCNQ2O43526 872 aa12.48□□□□□ -0.41
SQSTM1P1-201ENST00000603451 CABP4P57796 275 aa12.48□□□□□ -0.41
SQSTM1P1-201ENST00000603451 SLC27A3Q5K4L6 730 aa12.48□□□□□ -0.41
SQSTM1P1-201ENST00000603451 MPRIPQ6WCQ1 1025 aa12.48□□□□□ -0.41
SQSTM1P1-201ENST00000603451 COL5A3P25940 1745 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1P1-201ENST00000603451 CALD1Q05682 793 aaKnown RBP12.47□□□□□ -0.41
SQSTM1P1-201ENST00000603451 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
SQSTM1P1-201ENST00000603451 PIGBQ92521 554 aa12.47□□□□□ -0.41
SQSTM1P1-201ENST00000603451 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
SQSTM1P1-201ENST00000603451 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
SQSTM1P1-201ENST00000603451 RIPK4P57078 832 aa12.46□□□□□ -0.41
SQSTM1P1-201ENST00000603451 IL17REQ8NFR9 667 aa12.46□□□□□ -0.41
SQSTM1P1-201ENST00000603451 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
SQSTM1P1-201ENST00000603451 CCDC146Q8IYE0 955 aa12.45□□□□□ -0.42
SQSTM1P1-201ENST00000603451 LGR6Q9HBX8 967 aa12.45□□□□□ -0.42
SQSTM1P1-201ENST00000603451 LAMB4A4D0S4 1761 aa12.45□□□□□ -0.42
SQSTM1P1-201ENST00000603451 TJP1Q07157 1748 aa12.45□□□□□ -0.42
SQSTM1P1-201ENST00000603451 MIER1Q8N108 512 aa12.44□□□□□ -0.42
SQSTM1P1-201ENST00000603451 NFATC2IPQ8NCF5 419 aa12.44□□□□□ -0.42
SQSTM1P1-201ENST00000603451 C4BP0C0L5 1744 aa12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 APAF1O14727 1248 aa12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 TXNRD1Q16881 649 aa12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 MCM10Q7L590 875 aa12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
SQSTM1P1-201ENST00000603451 TAF7Q15545 349 aaPredicted RBP12.42□□□□□ -0.42
SQSTM1P1-201ENST00000603451 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
SQSTM1P1-201ENST00000603451 DEFB132Q7Z7B7 95 aa12.42□□□□□ -0.42
SQSTM1P1-201ENST00000603451 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
SQSTM1P1-201ENST00000603451 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
SQSTM1P1-201ENST00000603451 IL16Q14005 1332 aa12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 LOC102724428A0A0B4J2F2 783 aa12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 BTBD11A6QL63 1104 aa12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 SIK1P57059 783 aa12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
SQSTM1P1-201ENST00000603451 NBPF14Q5TI25 921 aa12.4□□□□□ -0.42
SQSTM1P1-201ENST00000603451 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
SQSTM1P1-201ENST00000603451 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
SQSTM1P1-201ENST00000603451 PROM2Q8N271 834 aa12.39□□□□□ -0.43
SQSTM1P1-201ENST00000603451 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
SQSTM1P1-201ENST00000603451 TEX13AQ9BXU3 409 aaPredicted RBP12.39□□□□□ -0.43
SQSTM1P1-201ENST00000603451 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
SQSTM1P1-201ENST00000603451 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
SQSTM1P1-201ENST00000603451 HEG1Q9ULI3 1381 aa12.39□□□□□ -0.43
SQSTM1P1-201ENST00000603451 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
SQSTM1P1-201ENST00000603451 GNAI1P63096 354 aa12.38□□□□□ -0.43
SQSTM1P1-201ENST00000603451 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
SQSTM1P1-201ENST00000603451 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
SQSTM1P1-201ENST00000603451 WDR63Q8IWG1 891 aa12.38□□□□□ -0.43
SQSTM1P1-201ENST00000603451 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
SQSTM1P1-201ENST00000603451 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
SQSTM1P1-201ENST00000603451 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1P1-201ENST00000603451 CHL1O00533 1208 aa12.37□□□□□ -0.43
SQSTM1P1-201ENST00000603451 ATP6V1AP38606 617 aa12.37□□□□□ -0.43
SQSTM1P1-201ENST00000603451 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
SQSTM1P1-201ENST00000603451 CASZ1Q86V15 1759 aa12.37□□□□□ -0.43
SQSTM1P1-201ENST00000603451 HOXB7P09629 217 aa12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 ZNF853P0CG23 659 aa12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 RC3H1Q5TC82 1133 aaKnown RBP12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 CHMP4AQ9BY43 222 aa12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 ZNF521Q96K83 1311 aa12.36□□□□□ -0.43
SQSTM1P1-201ENST00000603451 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 SNRPA1P09661 255 aaKnown RBP12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 SLC15A2Q16348 729 aa12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 ZNF496Q96IT1 587 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 ERBB4Q15303 1308 aa12.35□□□□□ -0.43
SQSTM1P1-201ENST00000603451 C4AP0C0L4 1744 aa12.34□□□□□ -0.43
SQSTM1P1-201ENST00000603451 COL24A1Q17RW2 1714 aa12.34□□□□□ -0.43
SQSTM1P1-201ENST00000603451 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
SQSTM1P1-201ENST00000603451 STARD3NLO95772 234 aa12.34□□□□□ -0.43
SQSTM1P1-201ENST00000603451 ADRA2BP18089 450 aa12.34□□□□□ -0.43
SQSTM1P1-201ENST00000603451 SSFA2P28290 1259 aa12.34□□□□□ -0.43
SQSTM1P1-201ENST00000603451 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
SQSTM1P1-201ENST00000603451 ITPK1Q13572 414 aa12.33□□□□□ -0.44
SQSTM1P1-201ENST00000603451 AK7Q96M32 723 aa12.33□□□□□ -0.44
SQSTM1P1-201ENST00000603451 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
SQSTM1P1-201ENST00000603451 MYH16Q9H6N6 1097 aa12.33□□□□□ -0.44
SQSTM1P1-201ENST00000603451 SCN7AQ01118 1682 aa12.32□□□□□ -0.44
SQSTM1P1-201ENST00000603451 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
SQSTM1P1-201ENST00000603451 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
SQSTM1P1-201ENST00000603451 LRP5O75197 1615 aa12.32□□□□□ -0.44
SQSTM1P1-201ENST00000603451 CACNA1FO60840 1977 aa12.32□□□□□ -0.44
SQSTM1P1-201ENST00000603451 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1P1-201ENST00000603451 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms