RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 PALD1Q9ULE6 856 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 FAM200AQ8TCP9 573 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 GTF3C6Q969F1 213 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 ABCA8O94911 1581 aa13.35□□□□□ -0.27
ZNF559-213ENST00000603380 H2AFXP16104 143 aaPredicted RBP13.35□□□□□ -0.27
ZNF559-213ENST00000603380 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
ZNF559-213ENST00000603380 PTPRCP08575 1304 aa13.35□□□□□ -0.27
ZNF559-213ENST00000603380 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
ZNF559-213ENST00000603380 RGS12O14924 1447 aa13.35□□□□□ -0.27
ZNF559-213ENST00000603380 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
ZNF559-213ENST00000603380 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 NYAP1Q6ZVC0 841 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 PLA2G4DQ86XP0 818 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 NEK11Q8NG66 645 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 SLC52A1Q9NWF4 448 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 ABCA6Q8N139 1617 aa13.34□□□□□ -0.27
ZNF559-213ENST00000603380 VAMP4O75379 141 aa13.33□□□□□ -0.27
ZNF559-213ENST00000603380 MLECQ14165 292 aa13.33□□□□□ -0.27
ZNF559-213ENST00000603380 LUZP1Q86V48 1076 aa13.33□□□□□ -0.27
ZNF559-213ENST00000603380 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.27
ZNF559-213ENST00000603380 MYO3AQ8NEV4 1616 aa13.33□□□□□ -0.28
ZNF559-213ENST00000603380 USP27XA6NNY8 438 aa13.33□□□□□ -0.28
ZNF559-213ENST00000603380 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
ZNF559-213ENST00000603380 TRPM2O94759 1503 aa13.33□□□□□ -0.28
ZNF559-213ENST00000603380 TRIM66O15016 1216 aa13.33□□□□□ -0.28
ZNF559-213ENST00000603380 FIBPO43427 364 aa13.33□□□□□ -0.28
ZNF559-213ENST00000603380 LOC102724159A0A0B4J2E5 919 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 ATP10BO94823 1461 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 ZNF75DP51815 510 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 PWP2Q15269 919 aaKnown RBP13.32□□□□□ -0.28
ZNF559-213ENST00000603380 TMX1Q9H3N1 280 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 LCMT1Q9UIC8 334 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 MRVI1Q9Y6F6 885 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 MYO1CO00159 1063 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
ZNF559-213ENST00000603380 ANAPC15P60006 121 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 DRC7Q8IY82 874 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 ATG3Q9NT62 314 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 SYCP2Q9BX26 1530 aa13.32□□□□□ -0.28
ZNF559-213ENST00000603380 CCDC171Q6TFL3 1326 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
ZNF559-213ENST00000603380 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.31□□□□□ -0.28
ZNF559-213ENST00000603380 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 TXLNBQ8N3L3 684 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 IL17RAQ96F46 866 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
ZNF559-213ENST00000603380 GYS2P54840 703 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
ZNF559-213ENST00000603380 ATP10DQ9P241 1426 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 CASQ1P31415 396 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 ICE2Q659A1 982 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 KRBA2Q6ZNG9 492 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
ZNF559-213ENST00000603380 HDAC5Q9UQL6 1122 aa13.31□□□□□ -0.28
ZNF559-213ENST00000603380 CLCN6P51797 869 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 PTPN14Q15678 1187 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 C10orf67Q8IYJ2 551 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 ANKRD44Q8N8A2 993 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 COL3A1P02461 1466 aaPredicted RBP13.3□□□□□ -0.28
ZNF559-213ENST00000603380 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
ZNF559-213ENST00000603380 NPHP1O15259 732 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 F13A1P00488 732 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 BRD2P25440 801 aaKnown RBP13.29□□□□□ -0.28
ZNF559-213ENST00000603380 TYRO3Q06418 890 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 ESYT1Q9BSJ8 1104 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 TRIM5Q9C035 493 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 STX6O43752 255 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 SYT1P21579 422 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 ST5P78524 1137 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 ERCC6LQ2NKX8 1250 aa13.29□□□□□ -0.28
ZNF559-213ENST00000603380 ZRANB2O95218 330 aaKnown RBP eCLIP13.28□□□□□ -0.28
ZNF559-213ENST00000603380 RAD50Q92878 1312 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 TEX35Q5T0J7 233 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 SMARCE1Q969G3 411 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 EXOC6BQ9Y2D4 811 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 KIF24Q5T7B8 1368 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
ZNF559-213ENST00000603380 MCCP23508 829 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 OSBPL3Q9H4L5 887 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
ZNF559-213ENST00000603380 APBB1O00213 710 aa13.27□□□□□ -0.28
ZNF559-213ENST00000603380 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.28
ZNF559-213ENST00000603380 ZSCAN26Q16670 478 aa13.27□□□□□ -0.28
ZNF559-213ENST00000603380 TDRD7Q8NHU6 1098 aaKnown RBP13.27□□□□□ -0.28
ZNF559-213ENST00000603380 UBXN6Q9BZV1 441 aa13.27□□□□□ -0.28
ZNF559-213ENST00000603380 LRRFIP2Q9Y608 721 aaKnown RBP13.27□□□□□ -0.28
ZNF559-213ENST00000603380 NSD2O96028 1365 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms