RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 NFATC2IPQ8NCF5 419 aa24.8■■□□□ 1.56
UBE2E3-209ENST00000602710 SLC52A2Q9HAB3 445 aa24.8■■□□□ 1.56
UBE2E3-209ENST00000602710 SIPA1L3O60292 1781 aaPredicted RBP24.79■■□□□ 1.56
UBE2E3-209ENST00000602710 RXRBP28702 533 aa24.79■■□□□ 1.56
UBE2E3-209ENST00000602710 CABP4P57796 275 aa24.78■■□□□ 1.56
UBE2E3-209ENST00000602710 TSPYL4Q9UJ04 414 aa24.78■■□□□ 1.56
UBE2E3-209ENST00000602710 ERVV-2B6SEH9 535 aa24.77■■□□□ 1.56
UBE2E3-209ENST00000602710 MRC1P22897 1456 aa24.77■■□□□ 1.56
UBE2E3-209ENST00000602710 KAT6BQ8WYB5 2073 aa24.77■■□□□ 1.56
UBE2E3-209ENST00000602710 FAM182BQ5T319 152 aa24.76■■□□□ 1.55
UBE2E3-209ENST00000602710 BRWD3Q6RI45 1802 aa24.76■■□□□ 1.55
UBE2E3-209ENST00000602710 BTBD11A6QL63 1104 aa24.76■■□□□ 1.55
UBE2E3-209ENST00000602710 EXOSC9Q06265 439 aaKnown RBP24.75■■□□□ 1.55
UBE2E3-209ENST00000602710 KCNQ3O43525 872 aa24.74■■□□□ 1.55
UBE2E3-209ENST00000602710 ITGB4P16144 1822 aa24.74■■□□□ 1.55
UBE2E3-209ENST00000602710 DOT1LQ8TEK3 1739 aa24.74■■□□□ 1.55
UBE2E3-209ENST00000602710 ACSBG1Q96GR2 724 aa24.73■■□□□ 1.55
UBE2E3-209ENST00000602710 BABAM1Q9NWV8 329 aa24.73■■□□□ 1.55
UBE2E3-209ENST00000602710 PRIM1P49642 420 aaKnown RBP24.72■■□□□ 1.55
UBE2E3-209ENST00000602710 KDM3BQ7LBC6 1761 aa24.72■■□□□ 1.55
UBE2E3-209ENST00000602710 SLC39A6Q13433 755 aa24.71■■□□□ 1.55
UBE2E3-209ENST00000602710 KRT24Q2M2I5 525 aa24.71■■□□□ 1.55
UBE2E3-209ENST00000602710 SYTL4Q96C24 671 aaPredicted RBP24.71■■□□□ 1.55
UBE2E3-209ENST00000602710 TMOD3Q9NYL9 352 aa24.71■■□□□ 1.55
UBE2E3-209ENST00000602710 KRT27Q7Z3Y8 459 aa24.7■■□□□ 1.54
UBE2E3-209ENST00000602710 C8orf58Q8NAV2 365 aa24.7■■□□□ 1.54
UBE2E3-209ENST00000602710 PIGBQ92521 554 aa24.7■■□□□ 1.54
UBE2E3-209ENST00000602710 TSPYL6Q8N831 410 aa24.69■■□□□ 1.54
UBE2E3-209ENST00000602710 RGS12O14924 1447 aa24.68■■□□□ 1.54
UBE2E3-209ENST00000602710 ELL2O00472 640 aaPredicted RBP24.68■■□□□ 1.54
UBE2E3-209ENST00000602710 KCNQ2O43526 872 aa24.67■■□□□ 1.54
UBE2E3-209ENST00000602710 ZNF790Q6PG37 636 aa24.67■■□□□ 1.54
UBE2E3-209ENST00000602710 BCL9O00512 1426 aa24.67■■□□□ 1.54
UBE2E3-209ENST00000602710 EIF4A1P60842 406 aaKnown RBP24.67■■□□□ 1.54
UBE2E3-209ENST00000602710 SOCS7O14512 581 aa24.66■■□□□ 1.54
UBE2E3-209ENST00000602710 ASAP1Q9ULH1 1129 aa24.64■■□□□ 1.54
UBE2E3-209ENST00000602710 TWISTNBQ3B726 338 aaPredicted RBP24.63■■□□□ 1.53
UBE2E3-209ENST00000602710 PTF1AQ7RTS3 328 aa24.63■■□□□ 1.53
UBE2E3-209ENST00000602710 RCAN3Q9UKA8 241 aa24.63■■□□□ 1.53
UBE2E3-209ENST00000602710 PAPPAQ13219 1627 aa24.63■■□□□ 1.53
UBE2E3-209ENST00000602710 VAMP4O75379 141 aa24.63■■□□□ 1.53
UBE2E3-209ENST00000602710 TTC5Q8N0Z6 440 aa24.63■■□□□ 1.53
UBE2E3-209ENST00000602710 ATG3Q9NT62 314 aa24.63■■□□□ 1.53
UBE2E3-209ENST00000602710 SBF2Q86WG5 1849 aa24.62■■□□□ 1.53
UBE2E3-209ENST00000602710 ZNF496Q96IT1 587 aaPredicted RBP24.62■■□□□ 1.53
UBE2E3-209ENST00000602710 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
UBE2E3-209ENST00000602710 FAM196AQ6ZSG2 479 aa24.6■■□□□ 1.53
UBE2E3-209ENST00000602710 CT47B1P0C2W7 299 aaPredicted RBP24.59■■□□□ 1.53
UBE2E3-209ENST00000602710 HEG1Q9ULI3 1381 aa24.59■■□□□ 1.53
UBE2E3-209ENST00000602710 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
UBE2E3-209ENST00000602710 NHSQ6T4R5 1651 aa24.59■■□□□ 1.53
UBE2E3-209ENST00000602710 PTCD1O75127 700 aaKnown RBP24.59■■□□□ 1.53
UBE2E3-209ENST00000602710 KCPQ6ZWJ8 1503 aa24.58■■□□□ 1.53
UBE2E3-209ENST00000602710 PRAMEF22A3QJZ6 481 aa24.58■■□□□ 1.52
UBE2E3-209ENST00000602710 FMNL2Q96PY5 1086 aa24.58■■□□□ 1.52
UBE2E3-209ENST00000602710 GIGYF1O75420 1035 aaPredicted RBP24.57■■□□□ 1.52
UBE2E3-209ENST00000602710 RARSP54136 660 aaKnown RBP24.57■■□□□ 1.52
UBE2E3-209ENST00000602710 TCERG1O14776 1098 aaKnown RBP24.56■■□□□ 1.52
UBE2E3-209ENST00000602710 SUPT16HQ9Y5B9 1047 aaKnown RBP24.56■■□□□ 1.52
UBE2E3-209ENST00000602710 BCAR3O75815 825 aa24.55■■□□□ 1.52
UBE2E3-209ENST00000602710 BCL2L13Q9BXK5 485 aa24.55■■□□□ 1.52
UBE2E3-209ENST00000602710 BTAF1O14981 1849 aa24.55■■□□□ 1.52
UBE2E3-209ENST00000602710 NECTIN2Q92692 538 aa24.54■■□□□ 1.52
UBE2E3-209ENST00000602710 C5P01031 1676 aa24.54■■□□□ 1.52
UBE2E3-209ENST00000602710 SSH1Q8WYL5 1049 aa24.54■■□□□ 1.52
UBE2E3-209ENST00000602710 RBM42Q9BTD8 480 aaKnown RBP24.54■■□□□ 1.52
UBE2E3-209ENST00000602710 TRIM37O94972 964 aa24.52■■□□□ 1.52
UBE2E3-209ENST00000602710 HOXB7P09629 217 aa24.52■■□□□ 1.52
UBE2E3-209ENST00000602710 SNRPA1P09661 255 aaKnown RBP24.52■■□□□ 1.52
UBE2E3-209ENST00000602710 EIF2S2P20042 333 aaKnown RBP24.52■■□□□ 1.52
UBE2E3-209ENST00000602710 BCL11BQ9C0K0 894 aaPredicted RBP24.52■■□□□ 1.52
UBE2E3-209ENST00000602710 EP400Q96L91 3159 aa24.51■■□□□ 1.51
UBE2E3-209ENST00000602710 SOS1Q07889 1333 aaPredicted RBP24.51■■□□□ 1.51
UBE2E3-209ENST00000602710 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
UBE2E3-209ENST00000602710 SLC4A9Q96Q91 983 aa24.51■■□□□ 1.51
UBE2E3-209ENST00000602710 HDGFL1Q5TGJ6 251 aa24.5■■□□□ 1.51
UBE2E3-209ENST00000602710 SMC4Q9NTJ3 1288 aa24.5■■□□□ 1.51
UBE2E3-209ENST00000602710 USP16Q9Y5T5 823 aa24.5■■□□□ 1.51
UBE2E3-209ENST00000602710 PALLDQ8WX93 1383 aa24.5■■□□□ 1.51
UBE2E3-209ENST00000602710 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
UBE2E3-209ENST00000602710 SMARCC1Q92922 1105 aaPredicted RBP24.5■■□□□ 1.51
UBE2E3-209ENST00000602710 CCDC30Q5VVM6 783 aa24.47■■□□□ 1.51
UBE2E3-209ENST00000602710 MRPL50Q8N5N7 158 aaKnown RBP24.47■■□□□ 1.51
UBE2E3-209ENST00000602710 DNAJC10Q8IXB1 793 aa24.46■■□□□ 1.51
UBE2E3-209ENST00000602710 VSIG10Q8N0Z9 540 aa24.46■■□□□ 1.51
UBE2E3-209ENST00000602710 LOC102724428A0A0B4J2F2 783 aa24.46■■□□□ 1.51
UBE2E3-209ENST00000602710 PLIN1O60240 522 aa24.46■■□□□ 1.51
UBE2E3-209ENST00000602710 SIK1P57059 783 aa24.46■■□□□ 1.51
UBE2E3-209ENST00000602710 RNF123Q5XPI4 1314 aa24.45■■□□□ 1.5
UBE2E3-209ENST00000602710 LAMB4A4D0S4 1761 aa24.45■■□□□ 1.5
UBE2E3-209ENST00000602710 SLC4A2P04920 1241 aa24.44■■□□□ 1.5
UBE2E3-209ENST00000602710 STK31Q9BXU1 1019 aa24.44■■□□□ 1.5
UBE2E3-209ENST00000602710 CHPF2Q9P2E5 772 aa24.44■■□□□ 1.5
UBE2E3-209ENST00000602710 ATP6V1AP38606 617 aa24.43■■□□□ 1.5
UBE2E3-209ENST00000602710 RRP1P56182 461 aaKnown RBP24.43■■□□□ 1.5
UBE2E3-209ENST00000602710 FRAT1Q92837 279 aaPredicted RBP24.43■■□□□ 1.5
UBE2E3-209ENST00000602710 TJP1Q07157 1748 aa24.43■■□□□ 1.5
UBE2E3-209ENST00000602710 ANXA1P04083 346 aa24.42■■□□□ 1.5
UBE2E3-209ENST00000602710 KCNQ4P56696 695 aa24.42■■□□□ 1.5
UBE2E3-209ENST00000602710 PIP4K2AP48426 406 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms