RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 HOXC9P31274 260 aa13.3□□□□□ -0.28
ZNF558-207ENST00000601372 TNNQ9UQP3 1299 aa13.3□□□□□ -0.28
ZNF558-207ENST00000601372 MRE11P49959 708 aa13.3□□□□□ -0.28
ZNF558-207ENST00000601372 STK11IPQ8N1F8 1099 aa13.3□□□□□ -0.28
ZNF558-207ENST00000601372 NEK4P51957 841 aa13.3□□□□□ -0.28
ZNF558-207ENST00000601372 CNTROBQ8N137 903 aa13.29□□□□□ -0.28
ZNF558-207ENST00000601372 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
ZNF558-207ENST00000601372 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
ZNF558-207ENST00000601372 K7ELQ4 463 aaPredicted RBP13.29□□□□□ -0.28
ZNF558-207ENST00000601372 ZSCAN29Q8IWY8 852 aaPredicted RBP13.29□□□□□ -0.28
ZNF558-207ENST00000601372 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
ZNF558-207ENST00000601372 FLT4P35916 1363 aa13.29□□□□□ -0.28
ZNF558-207ENST00000601372 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
ZNF558-207ENST00000601372 ATP2B2Q01814 1243 aa13.29□□□□□ -0.28
ZNF558-207ENST00000601372 ABCA9Q8IUA7 1624 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 ARHGEF12Q9NZN5 1544 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 PCDH11XQ9BZA7 1347 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
ZNF558-207ENST00000601372 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 CT47B1P0C2W7 299 aaPredicted RBP13.28□□□□□ -0.28
ZNF558-207ENST00000601372 IP6K1Q92551 441 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
ZNF558-207ENST00000601372 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
ZNF558-207ENST00000601372 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 TRIM27P14373 513 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 NBPF6Q5VWK0 638 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
ZNF558-207ENST00000601372 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 NBPF4Q96M43 638 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 CDC42BPBQ9Y5S2 1711 aa13.28□□□□□ -0.28
ZNF558-207ENST00000601372 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.28
ZNF558-207ENST00000601372 SRGAP3O43295 1099 aa13.27□□□□□ -0.28
ZNF558-207ENST00000601372 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.28
ZNF558-207ENST00000601372 RNF20Q5VTR2 975 aa13.27□□□□□ -0.28
ZNF558-207ENST00000601372 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.28
ZNF558-207ENST00000601372 SF3A1Q15459 793 aaKnown RBP13.27□□□□□ -0.29
ZNF558-207ENST00000601372 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
ZNF558-207ENST00000601372 TESK2Q96S53 571 aa13.27□□□□□ -0.29
ZNF558-207ENST00000601372 SETDB2Q96T68 719 aa13.27□□□□□ -0.29
ZNF558-207ENST00000601372 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.27□□□□□ -0.294e-6■■□□□ 13.6
ZNF558-207ENST00000601372 NFATC2IPQ8NCF5 419 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 PPP1R42Q7Z4L9 355 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 SIRT1Q96EB6 747 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 APBA3O96018 575 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 STK32BQ9NY57 414 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 SLC3A2P08195 630 aaKnown RBP13.26□□□□□ -0.29
ZNF558-207ENST00000601372 RALYLQ86SE5 291 aaKnown RBP13.26□□□□□ -0.29
ZNF558-207ENST00000601372 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
ZNF558-207ENST00000601372 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 ATP6V1DQ9Y5K8 247 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
ZNF558-207ENST00000601372 CDCA7Q9BWT1 371 aaPredicted RBP13.26□□□□□ -0.29
ZNF558-207ENST00000601372 ABCC3O15438 1527 aa13.26□□□□□ -0.29
ZNF558-207ENST00000601372 PIP4K2AP48426 406 aaPredicted RBP13.25□□□□□ -0.29
ZNF558-207ENST00000601372 MAP3K2Q9Y2U5 619 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 KDM4AO75164 1064 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 RABEP1Q15276 862 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 TBC1D2Q9BYX2 928 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 RAI14Q9P0K7 980 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 TPM4P67936 248 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 METP08581 1390 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 C6orf229H3BNL8 230 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 MCM4P33991 863 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 DDX46Q7L014 1031 aaKnown RBP13.25□□□□□ -0.29
ZNF558-207ENST00000601372 AACSQ86V21 672 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 CEP152O94986 1710 aa13.25□□□□□ -0.29
ZNF558-207ENST00000601372 TRIM29Q14134 588 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
ZNF558-207ENST00000601372 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
ZNF558-207ENST00000601372 CPLX1O14810 134 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 LRRCC1Q9C099 1032 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 ZNF592Q92610 1267 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 GRPEL1Q9HAV7 217 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 F6X3S4 739 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 MAP3K19Q56UN5 1328 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 ZNF772Q68DY9 489 aaPredicted RBP13.24□□□□□ -0.29
ZNF558-207ENST00000601372 LRP2BPQ9P2M1 347 aa13.24□□□□□ -0.29
ZNF558-207ENST00000601372 RXRBP28702 533 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 TTLL12Q14166 644 aaPredicted RBP13.23□□□□□ -0.29
ZNF558-207ENST00000601372 MPNDQ8N594 471 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 BICD2Q8TD16 824 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 CCNL1Q9UK58 526 aaPredicted RBP13.23□□□□□ -0.29
ZNF558-207ENST00000601372 R3HCC1Q9Y3T6 440 aaKnown RBP13.23□□□□□ -0.29
ZNF558-207ENST00000601372 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 GNPATO15228 680 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 EYA1Q99502 592 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 EDC4Q6P2E9 1401 aaKnown RBP13.23□□□□□ -0.29
ZNF558-207ENST00000601372 ABCC11Q96J66 1382 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 ABCF2Q9UG63 623 aa13.23□□□□□ -0.29
ZNF558-207ENST00000601372 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms