RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 SMC5Q8IY18 1101 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 CD2BP2O95400 341 aaKnown RBP15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 CABP4P57796 275 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 HDAC1Q13547 482 aaPredicted RBP15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 AACSQ86V21 672 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 CLASRPQ8N2M8 674 aaKnown RBP15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 CEP85Q6P2H3 762 aa15.47■□□□□ 0.07
NOTCH3-206ENST00000601011 NFATC2IPQ8NCF5 419 aa15.47■□□□□ 0.07
NOTCH3-206ENST00000601011 TATP17735 454 aaPredicted RBP15.47■□□□□ 0.07
NOTCH3-206ENST00000601011 FSD1Q9BTV5 496 aa15.47■□□□□ 0.07
NOTCH3-206ENST00000601011 NBPF7P0C2Y1 421 aaPredicted RBP15.46■□□□□ 0.07
NOTCH3-206ENST00000601011 MYD88Q99836 296 aa15.46■□□□□ 0.07
NOTCH3-206ENST00000601011 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.07
NOTCH3-206ENST00000601011 CCT4P50991 539 aaKnown RBP15.46■□□□□ 0.07
NOTCH3-206ENST00000601011 EDC4Q6P2E9 1401 aaKnown RBP15.46■□□□□ 0.07
NOTCH3-206ENST00000601011 CHL1O00533 1208 aa15.46■□□□□ 0.07
NOTCH3-206ENST00000601011 CPA1P15085 419 aa15.46■□□□□ 0.07
NOTCH3-206ENST00000601011 DIP2CQ9Y2E4 1556 aa15.46■□□□□ 0.06
NOTCH3-206ENST00000601011 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 CEBPZQ03701 1054 aaKnown RBP15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 PLEKHM2Q8IWE5 1019 aa15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 IL16Q14005 1332 aa15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 NINLQ9Y2I6 1382 aa15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 USP19O94966 1318 aa15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 QRICH2Q9H0J4 1663 aa15.45■□□□□ 0.06
NOTCH3-206ENST00000601011 GPATCH3Q96I76 525 aa15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 DDX58O95786 925 aaKnown RBP15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 MX1P20591 662 aa15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 MCM4P33991 863 aa15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 TBX22Q9Y458 520 aa15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 GSPT1P15170 499 aaKnown RBP15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 FAM43AQ8N2R8 423 aa15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 MROH1Q8NDA8 1641 aa15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 PUS7Q96PZ0 661 aaKnown RBP15.44■□□□□ 0.06
NOTCH3-206ENST00000601011 PROSER3Q2NL68 480 aa15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 APPP05067 770 aa15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 GPTP24298 496 aa15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 K7ELQ4 463 aaPredicted RBP15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 ZGPATQ8N5A5 531 aaKnown RBP15.43■□□□□ 0.06
NOTCH3-206ENST00000601011 ADGRB1O14514 1584 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 ERC2O15083 957 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 FIBPO43427 364 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 DNAAF4Q8WXU2 420 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 FLT4P35916 1363 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 UBE3BQ7Z3V4 1068 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 RRAGDQ9NQL2 400 aaPredicted RBP15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 PTPRMP28827 1452 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 CAMSAP1Q5T5Y3 1602 aa15.42■□□□□ 0.06
NOTCH3-206ENST00000601011 SNRKQ9NRH2 765 aa15.41■□□□□ 0.06
NOTCH3-206ENST00000601011 NEXMIFQ5QGS0 1516 aa15.41■□□□□ 0.06
NOTCH3-206ENST00000601011 WASHC4Q2M389 1173 aa15.41■□□□□ 0.06
NOTCH3-206ENST00000601011 ANKRD44Q8N8A2 993 aa15.41■□□□□ 0.06
NOTCH3-206ENST00000601011 PLEKHG3A1L390 1219 aa15.41■□□□□ 0.06
NOTCH3-206ENST00000601011 TNPO1Q92973 898 aaKnown RBP15.41■□□□□ 0.06
NOTCH3-206ENST00000601011 AXIN2Q9Y2T1 843 aa15.41■□□□□ 0.06
NOTCH3-206ENST00000601011 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 ARAP3Q8WWN8 1544 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 BMP2KLQ5H9B9 411 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 TTC22Q5TAA0 569 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 ZMYND15Q9H091 742 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 FKBP4Q02790 459 aaKnown RBP eCLIP15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 CPS1P31327 1500 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 COPS6Q7L5N1 327 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 UBE2Q2Q8WVN8 375 aa15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 ISY1Q9ULR0 285 aaKnown RBP15.4■□□□□ 0.06
NOTCH3-206ENST00000601011 PKP1Q13835 747 aa15.39■□□□□ 0.05
NOTCH3-206ENST00000601011 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
NOTCH3-206ENST00000601011 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
NOTCH3-206ENST00000601011 PDE1AP54750 535 aa15.39■□□□□ 0.05
NOTCH3-206ENST00000601011 BICDL1Q6ZP65 573 aa15.39■□□□□ 0.05
NOTCH3-206ENST00000601011 PIK3C2BO00750 1634 aa15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 AAMPQ13685 434 aa15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 DCTPP1Q9H773 170 aa15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 DDX11L8A8MPP1 907 aa15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 EDC3Q96F86 508 aaKnown RBP15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 XAGE3Q8WTP9 111 aa15.38■□□□□ 0.05
NOTCH3-206ENST00000601011 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
NOTCH3-206ENST00000601011 RBM27Q9P2N5 1060 aaKnown RBP15.37■□□□□ 0.05
NOTCH3-206ENST00000601011 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
NOTCH3-206ENST00000601011 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
NOTCH3-206ENST00000601011 JAKMIP1Q96N16 626 aaKnown RBP15.37■□□□□ 0.05
NOTCH3-206ENST00000601011 A0A087WZG4 1122 aa15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 DRC7Q8IY82 874 aa15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 KCNH5Q8NCM2 988 aa15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 ZKSCAN1P17029 563 aaPredicted RBP15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 SMC3Q9UQE7 1217 aa15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
NOTCH3-206ENST00000601011 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms