RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
SNRPA-208ENST00000600456 ASAP1Q9ULH1 1129 aa18.27■□□□□ 0.52
SNRPA-208ENST00000600456 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
SNRPA-208ENST00000600456 CCNL1Q9UK58 526 aaPredicted RBP18.26■□□□□ 0.51
SNRPA-208ENST00000600456 TEFQ10587 303 aa18.25■□□□□ 0.51
SNRPA-208ENST00000600456 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
SNRPA-208ENST00000600456 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
SNRPA-208ENST00000600456 PAPPAQ13219 1627 aa18.23■□□□□ 0.51
SNRPA-208ENST00000600456 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
SNRPA-208ENST00000600456 SIK1P57059 783 aa18.23■□□□□ 0.51
SNRPA-208ENST00000600456 STK32BQ9NY57 414 aa18.23■□□□□ 0.51
SNRPA-208ENST00000600456 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
SNRPA-208ENST00000600456 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
SNRPA-208ENST00000600456 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
SNRPA-208ENST00000600456 MCM10Q7L590 875 aa18.21■□□□□ 0.51
SNRPA-208ENST00000600456 ANO8Q9HCE9 1232 aaPredicted RBP18.21■□□□□ 0.51
SNRPA-208ENST00000600456 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
SNRPA-208ENST00000600456 RIPK4P57078 832 aa18.2■□□□□ 0.5
SNRPA-208ENST00000600456 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
SNRPA-208ENST00000600456 SLC15A2Q16348 729 aa18.2■□□□□ 0.5
SNRPA-208ENST00000600456 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
SNRPA-208ENST00000600456 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
SNRPA-208ENST00000600456 KCNQ4P56696 695 aa18.19■□□□□ 0.5
SNRPA-208ENST00000600456 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
SNRPA-208ENST00000600456 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
SNRPA-208ENST00000600456 DCTN1Q14203 1278 aa18.18■□□□□ 0.5
SNRPA-208ENST00000600456 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
SNRPA-208ENST00000600456 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
SNRPA-208ENST00000600456 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
SNRPA-208ENST00000600456 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
SNRPA-208ENST00000600456 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
SNRPA-208ENST00000600456 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
SNRPA-208ENST00000600456 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
SNRPA-208ENST00000600456 C5P01031 1676 aa18.16■□□□□ 0.5
SNRPA-208ENST00000600456 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
SNRPA-208ENST00000600456 SLC39A6Q13433 755 aa18.16■□□□□ 0.5
SNRPA-208ENST00000600456 ITPK1Q13572 414 aa18.16■□□□□ 0.5
SNRPA-208ENST00000600456 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
SNRPA-208ENST00000600456 ZNF827Q17R98 1081 aa18.16■□□□□ 0.5
SNRPA-208ENST00000600456 SLC4A9Q96Q91 983 aa18.16■□□□□ 0.5
SNRPA-208ENST00000600456 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
SNRPA-208ENST00000600456 KCPQ6ZWJ8 1503 aa18.15■□□□□ 0.5
SNRPA-208ENST00000600456 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
SNRPA-208ENST00000600456 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
SNRPA-208ENST00000600456 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
SNRPA-208ENST00000600456 APAF1O14727 1248 aa18.14■□□□□ 0.49
SNRPA-208ENST00000600456 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
SNRPA-208ENST00000600456 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
SNRPA-208ENST00000600456 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.49
SNRPA-208ENST00000600456 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
SNRPA-208ENST00000600456 AK7Q96M32 723 aa18.13■□□□□ 0.49
SNRPA-208ENST00000600456 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
SNRPA-208ENST00000600456 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
SNRPA-208ENST00000600456 TAF1LQ8IZX4 1826 aa18.13■□□□□ 0.49
SNRPA-208ENST00000600456 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
SNRPA-208ENST00000600456 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
SNRPA-208ENST00000600456 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
SNRPA-208ENST00000600456 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
SNRPA-208ENST00000600456 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
SNRPA-208ENST00000600456 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
SNRPA-208ENST00000600456 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
SNRPA-208ENST00000600456 CNTNAP4Q9C0A0 1308 aa18.12■□□□□ 0.49
SNRPA-208ENST00000600456 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
SNRPA-208ENST00000600456 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
SNRPA-208ENST00000600456 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
SNRPA-208ENST00000600456 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
SNRPA-208ENST00000600456 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
SNRPA-208ENST00000600456 PNPLA7Q6ZV29 1317 aa18.09■□□□□ 0.49
SNRPA-208ENST00000600456 CALD1Q05682 793 aaKnown RBP18.09■□□□□ 0.49
SNRPA-208ENST00000600456 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
SNRPA-208ENST00000600456 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
SNRPA-208ENST00000600456 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
SNRPA-208ENST00000600456 TJP1Q07157 1748 aa18.09■□□□□ 0.49
SNRPA-208ENST00000600456 KCNQ3O43525 872 aa18.08■□□□□ 0.48
SNRPA-208ENST00000600456 SSFA2P28290 1259 aa18.08■□□□□ 0.48
SNRPA-208ENST00000600456 GNPATO15228 680 aa18.07■□□□□ 0.48
SNRPA-208ENST00000600456 STARD3NLO95772 234 aa18.07■□□□□ 0.48
SNRPA-208ENST00000600456 CYP19A1P11511 503 aaPredicted RBP18.07■□□□□ 0.48
SNRPA-208ENST00000600456 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
SNRPA-208ENST00000600456 SLC16A10Q8TF71 515 aa18.07■□□□□ 0.48
SNRPA-208ENST00000600456 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
SNRPA-208ENST00000600456 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
SNRPA-208ENST00000600456 ADRA2BP18089 450 aa18.06■□□□□ 0.48
SNRPA-208ENST00000600456 CRKLP46109 303 aaKnown RBP18.06■□□□□ 0.48
SNRPA-208ENST00000600456 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
SNRPA-208ENST00000600456 MIS18AQ9NYP9 233 aa18.06■□□□□ 0.48
SNRPA-208ENST00000600456 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
SNRPA-208ENST00000600456 KDM3BQ7LBC6 1761 aa18.05■□□□□ 0.48
SNRPA-208ENST00000600456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.05■□□□□ 0.48
SNRPA-208ENST00000600456 CHL1O00533 1208 aa18.05■□□□□ 0.48
SNRPA-208ENST00000600456 RPS6KA4O75676 772 aa18.05■□□□□ 0.48
SNRPA-208ENST00000600456 MIER1Q8N108 512 aa18.05■□□□□ 0.48
SNRPA-208ENST00000600456 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
SNRPA-208ENST00000600456 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
SNRPA-208ENST00000600456 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
SNRPA-208ENST00000600456 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
SNRPA-208ENST00000600456 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
SNRPA-208ENST00000600456 COL23A1Q86Y22 540 aaPredicted RBP18.04■□□□□ 0.48
SNRPA-208ENST00000600456 CFAP44Q96MT7 982 aa18.04■□□□□ 0.48
SNRPA-208ENST00000600456 SPON1Q9HCB6 807 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms