RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PRKRIP1Q9H875 184 aaPredicted RBP37.53■■■■□ 3.6
SSBP4-206ENST00000599699 SLC52A2Q9HAB3 445 aa37.53■■■■□ 3.6
SSBP4-206ENST00000599699 SPON1Q9HCB6 807 aa37.53■■■■□ 3.6
SSBP4-206ENST00000599699 LRP5O75197 1615 aa37.52■■■■□ 3.6
SSBP4-206ENST00000599699 ZBTB7AO95365 584 aa37.52■■■■□ 3.6
SSBP4-206ENST00000599699 SCN11AQ9UI33 1791 aa37.51■■■■□ 3.6
SSBP4-206ENST00000599699 NEFMP07197 916 aa37.51■■■■□ 3.6
SSBP4-206ENST00000599699 ATP6V1AP38606 617 aa37.51■■■■□ 3.6
SSBP4-206ENST00000599699 CASZ1Q86V15 1759 aa37.48■■■■□ 3.59
SSBP4-206ENST00000599699 C5P01031 1676 aa37.47■■■■□ 3.59
SSBP4-206ENST00000599699 PTCD1O75127 700 aaKnown RBP37.46■■■■□ 3.59
SSBP4-206ENST00000599699 AK7Q96M32 723 aa37.46■■■■□ 3.59
SSBP4-206ENST00000599699 PNPLA7Q6ZV29 1317 aa37.45■■■■□ 3.59
SSBP4-206ENST00000599699 ITPK1Q13572 414 aa37.45■■■■□ 3.59
SSBP4-206ENST00000599699 ATF5Q9Y2D1 282 aaPredicted RBP37.45■■■■□ 3.59
SSBP4-206ENST00000599699 MSH5O43196 834 aa37.44■■■■□ 3.58
SSBP4-206ENST00000599699 TEFQ10587 303 aa37.44■■■■□ 3.58
SSBP4-206ENST00000599699 LINC00116Q8NCU8 138 aa37.44■■■■□ 3.58
SSBP4-206ENST00000599699 PNNQ9H307 717 aaKnown RBP37.44■■■■□ 3.58
SSBP4-206ENST00000599699 IL17REQ8NFR9 667 aa37.43■■■■□ 3.58
SSBP4-206ENST00000599699 MRC1P22897 1456 aa37.42■■■■□ 3.58
SSBP4-206ENST00000599699 MTFR1LQ9H019 292 aa37.42■■■■□ 3.58
SSBP4-206ENST00000599699 RTF1Q92541 710 aaKnown RBP37.41■■■■□ 3.58
SSBP4-206ENST00000599699 PPP1R1BQ9UD71 204 aaPredicted RBP37.41■■■■□ 3.58
SSBP4-206ENST00000599699 TAF1LQ8IZX4 1826 aa37.4■■■■□ 3.58
SSBP4-206ENST00000599699 SLC4A9Q96Q91 983 aa37.4■■■■□ 3.58
SSBP4-206ENST00000599699 C4BP0C0L5 1744 aa37.39■■■■□ 3.58
SSBP4-206ENST00000599699 SLC39A6Q13433 755 aa37.39■■■■□ 3.58
SSBP4-206ENST00000599699 ADAMTS7Q9UKP4 1686 aa37.39■■■■□ 3.58
SSBP4-206ENST00000599699 MAPK8IP3Q9UPT6 1336 aa37.38■■■■□ 3.58
SSBP4-206ENST00000599699 WDR43Q15061 677 aaKnown RBP eCLIP37.37■■■■□ 3.57
SSBP4-206ENST00000599699 PLEKHF1Q96S99 279 aa37.37■■■■□ 3.57
SSBP4-206ENST00000599699 COL23A1Q86Y22 540 aaPredicted RBP37.36■■■■□ 3.57
SSBP4-206ENST00000599699 FLAD1Q8NFF5 587 aa37.36■■■■□ 3.57
SSBP4-206ENST00000599699 SLC16A10Q8TF71 515 aa37.36■■■■□ 3.57
SSBP4-206ENST00000599699 VIRMAQ69YN4 1812 aaKnown RBP37.36■■■■□ 3.57
SSBP4-206ENST00000599699 QSER1Q2KHR3 1735 aa37.36■■■■□ 3.57
SSBP4-206ENST00000599699 TUBGCP6Q96RT7 1819 aa37.35■■■■□ 3.57
SSBP4-206ENST00000599699 PHF14O94880 888 aa37.34■■■■□ 3.57
SSBP4-206ENST00000599699 MCM10Q7L590 875 aa37.34■■■■□ 3.57
SSBP4-206ENST00000599699 GNPATO15228 680 aa37.33■■■■□ 3.57
SSBP4-206ENST00000599699 TTC5Q8N0Z6 440 aa37.33■■■■□ 3.57
SSBP4-206ENST00000599699 CEMIPQ8WUJ3 1361 aa37.32■■■■□ 3.57
SSBP4-206ENST00000599699 HTATSF1O43719 755 aaKnown RBP37.31■■■■□ 3.56
SSBP4-206ENST00000599699 PTGER2P43116 358 aa37.3■■■■□ 3.56
SSBP4-206ENST00000599699 DCTN1Q14203 1278 aa37.3■■■■□ 3.56
SSBP4-206ENST00000599699 NFE2L2Q16236 605 aa37.3■■■■□ 3.56
SSBP4-206ENST00000599699 SMIM5Q71RC9 77 aa37.3■■■■□ 3.56
SSBP4-206ENST00000599699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.29■■■■□ 3.56
SSBP4-206ENST00000599699 ZNF831Q5JPB2 1677 aa37.28■■■■□ 3.56
SSBP4-206ENST00000599699 ANP32CO43423 234 aa37.28■■■■□ 3.56
SSBP4-206ENST00000599699 AMIGO3Q86WK7 504 aa37.28■■■■□ 3.56
SSBP4-206ENST00000599699 SSFA2P28290 1259 aa37.27■■■■□ 3.56
SSBP4-206ENST00000599699 BTBD11A6QL63 1104 aa37.26■■■■□ 3.56
SSBP4-206ENST00000599699 RC3H1Q5TC82 1133 aaKnown RBP37.26■■■■□ 3.56
SSBP4-206ENST00000599699 ZNF790Q6PG37 636 aa37.25■■■■□ 3.55
SSBP4-206ENST00000599699 RTCBQ9Y3I0 505 aaKnown RBP37.25■■■■□ 3.55
SSBP4-206ENST00000599699 CNTNAP4Q9C0A0 1308 aa37.25■■■■□ 3.55
SSBP4-206ENST00000599699 POLD1P28340 1107 aa37.24■■■■□ 3.55
SSBP4-206ENST00000599699 DNAJC10Q8IXB1 793 aa37.24■■■■□ 3.55
SSBP4-206ENST00000599699 CCDC146Q8IYE0 955 aa37.24■■■■□ 3.55
SSBP4-206ENST00000599699 KCPQ6ZWJ8 1503 aa37.23■■■■□ 3.55
SSBP4-206ENST00000599699 ADAMTS8Q9UP79 889 aa37.23■■■■□ 3.55
SSBP4-206ENST00000599699 CRKLP46109 303 aaKnown RBP37.22■■■■□ 3.55
SSBP4-206ENST00000599699 MSL1Q68DK7 614 aa37.22■■■■□ 3.55
SSBP4-206ENST00000599699 SGIP1Q9BQI5 828 aa37.22■■■■□ 3.55
SSBP4-206ENST00000599699 UBR3Q6ZT12 1888 aa37.21■■■■□ 3.55
SSBP4-206ENST00000599699 ARXQ96QS3 562 aa37.2■■■■□ 3.55
SSBP4-206ENST00000599699 COL5A3P25940 1745 aaPredicted RBP37.19■■■■□ 3.54
SSBP4-206ENST00000599699 TRAPPC3LQ5T215 181 aa37.19■■■■□ 3.54
SSBP4-206ENST00000599699 VSIG10Q8N0Z9 540 aa37.19■■■■□ 3.54
SSBP4-206ENST00000599699 ZNF496Q96IT1 587 aaPredicted RBP37.19■■■■□ 3.54
SSBP4-206ENST00000599699 RPS6KA4O75676 772 aa37.18■■■■□ 3.54
SSBP4-206ENST00000599699 RIPK4P57078 832 aa37.18■■■■□ 3.54
SSBP4-206ENST00000599699 RUNDC1Q96C34 613 aa37.18■■■■□ 3.54
SSBP4-206ENST00000599699 SIPA1L3O60292 1781 aaPredicted RBP37.18■■■■□ 3.54
SSBP4-206ENST00000599699 TJP1Q07157 1748 aa37.18■■■■□ 3.54
SSBP4-206ENST00000599699 FMNL2Q96PY5 1086 aa37.17■■■■□ 3.54
SSBP4-206ENST00000599699 TAF7Q15545 349 aaPredicted RBP37.16■■■■□ 3.54
SSBP4-206ENST00000599699 KCNQ3O43525 872 aa37.15■■■■□ 3.54
SSBP4-206ENST00000599699 TMPOP42166 694 aaKnown RBP37.15■■■■□ 3.54
SSBP4-206ENST00000599699 CCDC87Q9NVE4 849 aa37.15■■■■□ 3.54
SSBP4-206ENST00000599699 CYP19A1P11511 503 aaPredicted RBP37.14■■■■□ 3.54
SSBP4-206ENST00000599699 ADRA2BP18089 450 aa37.14■■■■□ 3.54
SSBP4-206ENST00000599699 THUMPD2Q9BTF0 503 aaKnown RBP37.14■■■■□ 3.54
SSBP4-206ENST00000599699 RRP7AQ9Y3A4 280 aaKnown RBP37.14■■■■□ 3.54
SSBP4-206ENST00000599699 HEG1Q9ULI3 1381 aa37.14■■■■□ 3.54
SSBP4-206ENST00000599699 DLG5Q8TDM6 1919 aa37.13■■■■□ 3.53
SSBP4-206ENST00000599699 NEUROD2Q15784 382 aa37.13■■■■□ 3.53
SSBP4-206ENST00000599699 INTS5Q6P9B9 1019 aaKnown RBP37.13■■■■□ 3.53
SSBP4-206ENST00000599699 UBR2Q8IWV8 1755 aa37.13■■■■□ 3.53
SSBP4-206ENST00000599699 CICQ96RK0 1608 aaPredicted RBP37.13■■■■□ 3.53
SSBP4-206ENST00000599699 ARHGEF1Q92888 912 aaKnown RBP37.12■■■■□ 3.53
SSBP4-206ENST00000599699 STARD3NLO95772 234 aa37.11■■■■□ 3.53
SSBP4-206ENST00000599699 RFC4P35249 363 aa37.11■■■■□ 3.53
SSBP4-206ENST00000599699 CCDC184Q52MB2 194 aa37.11■■■■□ 3.53
SSBP4-206ENST00000599699 LMOD3Q0VAK6 560 aa37.1■■■■□ 3.53
SSBP4-206ENST00000599699 KLHL34Q8N239 644 aa37.1■■■■□ 3.53
SSBP4-206ENST00000599699 TEX13AQ9BXU3 409 aaPredicted RBP37.1■■■■□ 3.53
SSBP4-206ENST00000599699 FHDC1Q9C0D6 1143 aaPredicted RBP37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms