RNA–Protein interactions for RNA: ENST00000598343.5

SARS2-208, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene SARS2, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-208ENST00000598343 DLG5Q8TDM6 1919 aa23.59■■□□□ 1.37
SARS2-208ENST00000598343 CEMIPQ8WUJ3 1361 aa23.59■■□□□ 1.37
SARS2-208ENST00000598343 KAT6BQ8WYB5 2073 aa23.59■■□□□ 1.37
SARS2-208ENST00000598343 DCTN1Q14203 1278 aa23.58■■□□□ 1.37
SARS2-208ENST00000598343 RGPD3A6NKT7 1758 aaPredicted RBP23.57■■□□□ 1.36
SARS2-208ENST00000598343 RGPD4Q7Z3J3 1758 aa23.57■■□□□ 1.36
SARS2-208ENST00000598343 EZH2Q15910 746 aaKnown RBP23.57■■□□□ 1.36
SARS2-208ENST00000598343 SMARCC1Q92922 1105 aaPredicted RBP23.57■■□□□ 1.36
SARS2-208ENST00000598343 CAMKK2Q96RR4 588 aa23.57■■□□□ 1.36
SARS2-208ENST00000598343 ASAP1Q9ULH1 1129 aa23.55■■□□□ 1.36
SARS2-208ENST00000598343 PALLDQ8WX93 1383 aa23.54■■□□□ 1.36
SARS2-208ENST00000598343 ATG3Q9NT62 314 aa23.54■■□□□ 1.36
SARS2-208ENST00000598343 TXNRD1Q16881 649 aa23.52■■□□□ 1.36
SARS2-208ENST00000598343 THUMPD2Q9BTF0 503 aaKnown RBP23.52■■□□□ 1.36
SARS2-208ENST00000598343 TRIM35Q9UPQ4 493 aa23.52■■□□□ 1.36
SARS2-208ENST00000598343 SIPA1L3O60292 1781 aaPredicted RBP23.51■■□□□ 1.35
SARS2-208ENST00000598343 RREB1Q92766 1687 aa23.51■■□□□ 1.35
SARS2-208ENST00000598343 LY75O60449 1722 aa23.5■■□□□ 1.35
SARS2-208ENST00000598343 BTBD11A6QL63 1104 aa23.5■■□□□ 1.35
SARS2-208ENST00000598343 PROM2Q8N271 834 aa23.5■■□□□ 1.35
SARS2-208ENST00000598343 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
SARS2-208ENST00000598343 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
SARS2-208ENST00000598343 SLC39A6Q13433 755 aa23.49■■□□□ 1.35
SARS2-208ENST00000598343 TAF7Q15545 349 aaPredicted RBP23.49■■□□□ 1.35
SARS2-208ENST00000598343 SLC27A3Q5K4L6 730 aa23.49■■□□□ 1.35
SARS2-208ENST00000598343 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
SARS2-208ENST00000598343 RBM42Q9BTD8 480 aaKnown RBP23.48■■□□□ 1.35
SARS2-208ENST00000598343 CCNL1Q9UK58 526 aaPredicted RBP23.48■■□□□ 1.35
SARS2-208ENST00000598343 NCBP3Q53F19 620 aaKnown RBP23.47■■□□□ 1.35
SARS2-208ENST00000598343 LOC102724428A0A0B4J2F2 783 aa23.46■■□□□ 1.35
SARS2-208ENST00000598343 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
SARS2-208ENST00000598343 SIK1P57059 783 aa23.46■■□□□ 1.35
SARS2-208ENST00000598343 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
SARS2-208ENST00000598343 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
SARS2-208ENST00000598343 CALD1Q05682 793 aaKnown RBP23.45■■□□□ 1.34
SARS2-208ENST00000598343 CCDC27Q2M243 656 aa23.45■■□□□ 1.34
SARS2-208ENST00000598343 LRRC4BQ9NT99 713 aa23.45■■□□□ 1.34
SARS2-208ENST00000598343 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
SARS2-208ENST00000598343 KCNQ4P56696 695 aa23.44■■□□□ 1.34
SARS2-208ENST00000598343 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
SARS2-208ENST00000598343 HMGB2P26583 209 aaKnown RBP23.43■■□□□ 1.34
SARS2-208ENST00000598343 ATP6V1AP38606 617 aa23.43■■□□□ 1.34
SARS2-208ENST00000598343 MIS18AQ9NYP9 233 aa23.43■■□□□ 1.34
SARS2-208ENST00000598343 KCPQ6ZWJ8 1503 aa23.43■■□□□ 1.34
SARS2-208ENST00000598343 WWC1Q8IX03 1113 aa23.42■■□□□ 1.34
SARS2-208ENST00000598343 NBPF14Q5TI25 921 aa23.41■■□□□ 1.34
SARS2-208ENST00000598343 BABAM1Q9NWV8 329 aa23.41■■□□□ 1.34
SARS2-208ENST00000598343 TSPYL4Q9UJ04 414 aa23.41■■□□□ 1.34
SARS2-208ENST00000598343 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
SARS2-208ENST00000598343 UBR2Q8IWV8 1755 aa23.41■■□□□ 1.34
SARS2-208ENST00000598343 ZNF831Q5JPB2 1677 aa23.41■■□□□ 1.34
SARS2-208ENST00000598343 KCNQ3O43525 872 aa23.4■■□□□ 1.34
SARS2-208ENST00000598343 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
SARS2-208ENST00000598343 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
SARS2-208ENST00000598343 C5P01031 1676 aa23.39■■□□□ 1.34
SARS2-208ENST00000598343 ZNF496Q96IT1 587 aaPredicted RBP23.39■■□□□ 1.33
SARS2-208ENST00000598343 KDM3BQ7LBC6 1761 aa23.39■■□□□ 1.33
SARS2-208ENST00000598343 ITPK1Q13572 414 aa23.38■■□□□ 1.33
SARS2-208ENST00000598343 VSIG10Q8N0Z9 540 aa23.38■■□□□ 1.33
SARS2-208ENST00000598343 CFAP44Q96MT7 982 aa23.38■■□□□ 1.33
SARS2-208ENST00000598343 CHL1O00533 1208 aa23.37■■□□□ 1.33
SARS2-208ENST00000598343 HEG1Q9ULI3 1381 aa23.37■■□□□ 1.33
SARS2-208ENST00000598343 CICQ96RK0 1608 aaPredicted RBP23.37■■□□□ 1.33
SARS2-208ENST00000598343 GNAI1P63096 354 aa23.36■■□□□ 1.33
SARS2-208ENST00000598343 IFT57Q9NWB7 429 aa23.36■■□□□ 1.33
SARS2-208ENST00000598343 STK32BQ9NY57 414 aa23.36■■□□□ 1.33
SARS2-208ENST00000598343 WDR63Q8IWG1 891 aa23.35■■□□□ 1.33
SARS2-208ENST00000598343 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
SARS2-208ENST00000598343 ANO8Q9HCE9 1232 aaPredicted RBP23.35■■□□□ 1.33
SARS2-208ENST00000598343 TJP1Q07157 1748 aa23.35■■□□□ 1.33
SARS2-208ENST00000598343 TAF1LQ8IZX4 1826 aa23.35■■□□□ 1.33
SARS2-208ENST00000598343 EIF4A1P60842 406 aaKnown RBP23.34■■□□□ 1.33
SARS2-208ENST00000598343 DNAJC10Q8IXB1 793 aa23.34■■□□□ 1.33
SARS2-208ENST00000598343 IL16Q14005 1332 aa23.33■■□□□ 1.33
SARS2-208ENST00000598343 C4BP0C0L5 1744 aa23.33■■□□□ 1.33
SARS2-208ENST00000598343 ZNF853P0CG23 659 aa23.33■■□□□ 1.33
SARS2-208ENST00000598343 SLC15A2Q16348 729 aa23.33■■□□□ 1.33
SARS2-208ENST00000598343 TEX13AQ9BXU3 409 aaPredicted RBP23.33■■□□□ 1.33
SARS2-208ENST00000598343 ZNF827Q17R98 1081 aa23.32■■□□□ 1.32
SARS2-208ENST00000598343 AKT1S1Q96B36 256 aa23.32■■□□□ 1.32
SARS2-208ENST00000598343 AK7Q96M32 723 aa23.32■■□□□ 1.32
SARS2-208ENST00000598343 COL5A3P25940 1745 aaPredicted RBP23.32■■□□□ 1.32
SARS2-208ENST00000598343 SNRPA1P09661 255 aaKnown RBP23.31■■□□□ 1.32
SARS2-208ENST00000598343 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
SARS2-208ENST00000598343 STARD3NLO95772 234 aa23.3■■□□□ 1.32
SARS2-208ENST00000598343 R3HDM1Q15032 1099 aaKnown RBP23.3■■□□□ 1.32
SARS2-208ENST00000598343 TFCP2L1Q9NZI6 479 aa23.3■■□□□ 1.32
SARS2-208ENST00000598343 ZNF521Q96K83 1311 aa23.3■■□□□ 1.32
SARS2-208ENST00000598343 CNTNAP4Q9C0A0 1308 aa23.3■■□□□ 1.32
SARS2-208ENST00000598343 CYP19A1P11511 503 aaPredicted RBP23.29■■□□□ 1.32
SARS2-208ENST00000598343 CRKLP46109 303 aaKnown RBP23.29■■□□□ 1.32
SARS2-208ENST00000598343 HNRNPUQ00839 825 aaKnown RBP eCLIP23.29■■□□□ 1.32
SARS2-208ENST00000598343 RC3H1Q5TC82 1133 aaKnown RBP23.29■■□□□ 1.32
SARS2-208ENST00000598343 GIGYF1O75420 1035 aaPredicted RBP23.28■■□□□ 1.32
SARS2-208ENST00000598343 PRAMEF22A3QJZ6 481 aa23.27■■□□□ 1.32
SARS2-208ENST00000598343 PSDA5PKW4 1024 aaPredicted RBP23.27■■□□□ 1.32
SARS2-208ENST00000598343 GNPATO15228 680 aa23.27■■□□□ 1.32
SARS2-208ENST00000598343 TSR2Q969E8 191 aaKnown RBP23.26■■□□□ 1.31
SARS2-208ENST00000598343 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
SARS2-208ENST00000598343 USP16Q9Y5T5 823 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms