RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
LINC00343-205ENST00000598229 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
LINC00343-205ENST00000598229 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.26
LINC00343-205ENST00000598229 PNPLA7Q6ZV29 1317 aa13.45□□□□□ -0.26
LINC00343-205ENST00000598229 TTC21BQ7Z4L5 1316 aa13.45□□□□□ -0.26
LINC00343-205ENST00000598229 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
LINC00343-205ENST00000598229 RIMBP2O15034 1052 aa13.45□□□□□ -0.26
LINC00343-205ENST00000598229 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
LINC00343-205ENST00000598229 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
LINC00343-205ENST00000598229 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
LINC00343-205ENST00000598229 GOLGB1Q14789 3259 aaKnown RBP13.44□□□□□ -0.26
LINC00343-205ENST00000598229 FAM205CA6NFA0 338 aa13.44□□□□□ -0.26
LINC00343-205ENST00000598229 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
LINC00343-205ENST00000598229 IL2RBP14784 551 aa13.44□□□□□ -0.26
LINC00343-205ENST00000598229 HS3ST6Q96QI5 342 aa13.44□□□□□ -0.26
LINC00343-205ENST00000598229 GPBP1L1Q9HC44 474 aaPredicted RBP13.44□□□□□ -0.26
LINC00343-205ENST00000598229 RAB3GAP2Q9H2M9 1393 aa13.44□□□□□ -0.26
LINC00343-205ENST00000598229 ABCC6O95255 1503 aa13.44□□□□□ -0.26
LINC00343-205ENST00000598229 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
LINC00343-205ENST00000598229 ATP10DQ9P241 1426 aa13.43□□□□□ -0.26
LINC00343-205ENST00000598229 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
LINC00343-205ENST00000598229 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
LINC00343-205ENST00000598229 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
LINC00343-205ENST00000598229 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
LINC00343-205ENST00000598229 ERBB3P21860 1342 aa13.41□□□□□ -0.26
LINC00343-205ENST00000598229 PIK3C2AO00443 1686 aa13.41□□□□□ -0.26
LINC00343-205ENST00000598229 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
LINC00343-205ENST00000598229 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
LINC00343-205ENST00000598229 NFAT5O94916 1531 aa13.39□□□□□ -0.27
LINC00343-205ENST00000598229 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
LINC00343-205ENST00000598229 SPNS2Q8IVW8 549 aa13.39□□□□□ -0.27
LINC00343-205ENST00000598229 ADCY9O60503 1353 aa13.39□□□□□ -0.27
LINC00343-205ENST00000598229 STK25O00506 426 aa13.38□□□□□ -0.27
LINC00343-205ENST00000598229 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
LINC00343-205ENST00000598229 BTAF1O14981 1849 aa13.38□□□□□ -0.27
LINC00343-205ENST00000598229 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
LINC00343-205ENST00000598229 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
LINC00343-205ENST00000598229 ZSWIM6Q9HCJ5 1215 aa13.37□□□□□ -0.27
LINC00343-205ENST00000598229 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
LINC00343-205ENST00000598229 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
LINC00343-205ENST00000598229 APLP1P51693 650 aa13.36□□□□□ -0.27
LINC00343-205ENST00000598229 COL23A1Q86Y22 540 aaPredicted RBP13.36□□□□□ -0.27
LINC00343-205ENST00000598229 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
LINC00343-205ENST00000598229 ANKRD24Q8TF21 1146 aa13.36□□□□□ -0.27
LINC00343-205ENST00000598229 QRICH2Q9H0J4 1663 aa13.36□□□□□ -0.27
LINC00343-205ENST00000598229 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
LINC00343-205ENST00000598229 KCNQ4P56696 695 aa13.35□□□□□ -0.27
LINC00343-205ENST00000598229 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
LINC00343-205ENST00000598229 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
LINC00343-205ENST00000598229 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
LINC00343-205ENST00000598229 DDX54Q8TDD1 881 aaKnown RBP13.35□□□□□ -0.27
LINC00343-205ENST00000598229 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
LINC00343-205ENST00000598229 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
LINC00343-205ENST00000598229 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
LINC00343-205ENST00000598229 KIF3CO14782 793 aa13.33□□□□□ -0.28
LINC00343-205ENST00000598229 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
LINC00343-205ENST00000598229 ZNF526Q8TF50 670 aaPredicted RBP13.32□□□□□ -0.28
LINC00343-205ENST00000598229 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
LINC00343-205ENST00000598229 MFRPQ9BY79 579 aa13.32□□□□□ -0.28
LINC00343-205ENST00000598229 IP6K1Q92551 441 aa13.31□□□□□ -0.28
LINC00343-205ENST00000598229 KRTAP3-3Q9BYR6 98 aa13.31□□□□□ -0.28
LINC00343-205ENST00000598229 KRTAP3-2Q9BYR7 98 aa13.31□□□□□ -0.28
LINC00343-205ENST00000598229 NSD2O96028 1365 aa13.31□□□□□ -0.28
LINC00343-205ENST00000598229 TOMM70O94826 608 aa13.29□□□□□ -0.28
LINC00343-205ENST00000598229 MSL1Q68DK7 614 aa13.29□□□□□ -0.28
LINC00343-205ENST00000598229 NME9Q86XW9 330 aa13.29□□□□□ -0.28
LINC00343-205ENST00000598229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00343-205ENST00000598229 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
LINC00343-205ENST00000598229 RGL2O15211 777 aa13.28□□□□□ -0.28
LINC00343-205ENST00000598229 USP47Q96K76 1375 aa13.28□□□□□ -0.28
LINC00343-205ENST00000598229 KAT6BQ8WYB5 2073 aa13.28□□□□□ -0.28
LINC00343-205ENST00000598229 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
LINC00343-205ENST00000598229 LY75O60449 1722 aa13.27□□□□□ -0.29
LINC00343-205ENST00000598229 TUBGCP6Q96RT7 1819 aa13.27□□□□□ -0.29
LINC00343-205ENST00000598229 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
LINC00343-205ENST00000598229 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
LINC00343-205ENST00000598229 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
LINC00343-205ENST00000598229 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
LINC00343-205ENST00000598229 JMYQ8N9B5 988 aa13.24□□□□□ -0.29
LINC00343-205ENST00000598229 COL13A1Q5TAT6 717 aaPredicted RBP13.23□□□□□ -0.29
LINC00343-205ENST00000598229 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
LINC00343-205ENST00000598229 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
LINC00343-205ENST00000598229 VARS2Q5ST30 1063 aaKnown RBP13.22□□□□□ -0.29
LINC00343-205ENST00000598229 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
LINC00343-205ENST00000598229 TERF2IPQ9NYB0 399 aa13.22□□□□□ -0.29
LINC00343-205ENST00000598229 CD163L1Q9NR16 1453 aa13.22□□□□□ -0.29
LINC00343-205ENST00000598229 PRELPP51888 382 aa13.21□□□□□ -0.29
LINC00343-205ENST00000598229 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
LINC00343-205ENST00000598229 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
LINC00343-205ENST00000598229 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
LINC00343-205ENST00000598229 KLRG1Q96E93 195 aa13.21□□□□□ -0.29
LINC00343-205ENST00000598229 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.3
LINC00343-205ENST00000598229 HOXC9P31274 260 aa13.2□□□□□ -0.3
LINC00343-205ENST00000598229 AK7Q96M32 723 aa13.2□□□□□ -0.3
LINC00343-205ENST00000598229 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
LINC00343-205ENST00000598229 SLC12A5Q9H2X9 1139 aa13.2□□□□□ -0.3
LINC00343-205ENST00000598229 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
LINC00343-205ENST00000598229 LTN1O94822 1766 aa13.2□□□□□ -0.3
LINC00343-205ENST00000598229 FAM208AQ9UK61 1670 aaKnown RBP13.19□□□□□ -0.3
LINC00343-205ENST00000598229 SSFA2P28290 1259 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms