RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 ZNF784Q8NCA9 323 aaPredicted RBP18.04■□□□□ 0.48
PRKD2-208ENST00000597390 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
PRKD2-208ENST00000597390 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
PRKD2-208ENST00000597390 TAF1LQ8IZX4 1826 aa18.04■□□□□ 0.48
PRKD2-208ENST00000597390 C5P01031 1676 aa18.04■□□□□ 0.48
PRKD2-208ENST00000597390 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
PRKD2-208ENST00000597390 PTGER2P43116 358 aa18.04■□□□□ 0.48
PRKD2-208ENST00000597390 AMOTQ4VCS5 1084 aa18.04■□□□□ 0.48
PRKD2-208ENST00000597390 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
PRKD2-208ENST00000597390 APAF1O14727 1248 aa18.03■□□□□ 0.48
PRKD2-208ENST00000597390 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
PRKD2-208ENST00000597390 PLEKHO1Q53GL0 409 aaPredicted RBP18.03■□□□□ 0.48
PRKD2-208ENST00000597390 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
PRKD2-208ENST00000597390 PIGBQ92521 554 aa18.02■□□□□ 0.47
PRKD2-208ENST00000597390 TFCP2L1Q9NZI6 479 aa18.02■□□□□ 0.47
PRKD2-208ENST00000597390 PNPLA7Q6ZV29 1317 aa18.02■□□□□ 0.47
PRKD2-208ENST00000597390 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
PRKD2-208ENST00000597390 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
PRKD2-208ENST00000597390 SLC16A10Q8TF71 515 aa18.01■□□□□ 0.47
PRKD2-208ENST00000597390 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
PRKD2-208ENST00000597390 NEFMP07197 916 aa18■□□□□ 0.47
PRKD2-208ENST00000597390 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
PRKD2-208ENST00000597390 COL24A1Q17RW2 1714 aa18■□□□□ 0.47
PRKD2-208ENST00000597390 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
PRKD2-208ENST00000597390 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
PRKD2-208ENST00000597390 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
PRKD2-208ENST00000597390 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
PRKD2-208ENST00000597390 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
PRKD2-208ENST00000597390 C1QTNF8P60827 252 aa17.98■□□□□ 0.47
PRKD2-208ENST00000597390 VIRMAQ69YN4 1812 aaKnown RBP17.98■□□□□ 0.47
PRKD2-208ENST00000597390 C4BP0C0L5 1744 aa17.97■□□□□ 0.47
PRKD2-208ENST00000597390 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
PRKD2-208ENST00000597390 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
PRKD2-208ENST00000597390 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
PRKD2-208ENST00000597390 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
PRKD2-208ENST00000597390 TRIM35Q9UPQ4 493 aa17.97■□□□□ 0.47
PRKD2-208ENST00000597390 ERVV-2B6SEH9 535 aa17.96■□□□□ 0.47
PRKD2-208ENST00000597390 RIPK4P57078 832 aa17.96■□□□□ 0.47
PRKD2-208ENST00000597390 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
PRKD2-208ENST00000597390 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
PRKD2-208ENST00000597390 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
PRKD2-208ENST00000597390 KDM6AO15550 1401 aaPredicted RBP17.95■□□□□ 0.46
PRKD2-208ENST00000597390 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
PRKD2-208ENST00000597390 SIK1P57059 783 aa17.94■□□□□ 0.46
PRKD2-208ENST00000597390 CCDC27Q2M243 656 aa17.94■□□□□ 0.46
PRKD2-208ENST00000597390 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
PRKD2-208ENST00000597390 ARXQ96QS3 562 aa17.94■□□□□ 0.46
PRKD2-208ENST00000597390 ASAP1Q9ULH1 1129 aa17.94■□□□□ 0.46
PRKD2-208ENST00000597390 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
PRKD2-208ENST00000597390 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRKD2-208ENST00000597390 COL23A1Q86Y22 540 aaPredicted RBP17.93■□□□□ 0.46
PRKD2-208ENST00000597390 NGEFQ8N5V2 710 aa17.93■□□□□ 0.46
PRKD2-208ENST00000597390 FHDC1Q9C0D6 1143 aaPredicted RBP17.93■□□□□ 0.46
PRKD2-208ENST00000597390 UBR3Q6ZT12 1888 aa17.93■□□□□ 0.46
PRKD2-208ENST00000597390 POLD1P28340 1107 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 FLAD1Q8NFF5 587 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 ATG3Q9NT62 314 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 ZNF831Q5JPB2 1677 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 ZNF521Q96K83 1311 aa17.92■□□□□ 0.46
PRKD2-208ENST00000597390 MSH5O43196 834 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 DCTN1Q14203 1278 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 WWC1Q8IX03 1113 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 AK7Q96M32 723 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 SALL2Q9Y467 1007 aaPredicted RBP17.91■□□□□ 0.46
PRKD2-208ENST00000597390 ATP6V1AP38606 617 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 CABP4P57796 275 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 MCM10Q7L590 875 aa17.91■□□□□ 0.46
PRKD2-208ENST00000597390 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
PRKD2-208ENST00000597390 RNMTO43148 476 aaKnown RBP17.9■□□□□ 0.46
PRKD2-208ENST00000597390 LMOD3Q0VAK6 560 aa17.9■□□□□ 0.46
PRKD2-208ENST00000597390 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
PRKD2-208ENST00000597390 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
PRKD2-208ENST00000597390 MRC1P22897 1456 aa17.89■□□□□ 0.45
PRKD2-208ENST00000597390 ITPK1Q13572 414 aa17.89■□□□□ 0.45
PRKD2-208ENST00000597390 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
PRKD2-208ENST00000597390 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
PRKD2-208ENST00000597390 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
PRKD2-208ENST00000597390 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
PRKD2-208ENST00000597390 SSFA2P28290 1259 aa17.86■□□□□ 0.45
PRKD2-208ENST00000597390 NFATC2IPQ8NCF5 419 aa17.86■□□□□ 0.45
PRKD2-208ENST00000597390 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
PRKD2-208ENST00000597390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.85■□□□□ 0.45
PRKD2-208ENST00000597390 AMIGO3Q86WK7 504 aa17.85■□□□□ 0.45
PRKD2-208ENST00000597390 WDR63Q8IWG1 891 aa17.85■□□□□ 0.45
PRKD2-208ENST00000597390 SLC4A9Q96Q91 983 aa17.85■□□□□ 0.45
PRKD2-208ENST00000597390 GNPATO15228 680 aa17.84■□□□□ 0.45
PRKD2-208ENST00000597390 PHF14O94880 888 aa17.84■□□□□ 0.45
PRKD2-208ENST00000597390 MSL1Q68DK7 614 aa17.84■□□□□ 0.45
PRKD2-208ENST00000597390 SLC52A2Q9HAB3 445 aa17.84■□□□□ 0.45
PRKD2-208ENST00000597390 CICQ96RK0 1608 aaPredicted RBP17.83■□□□□ 0.45
PRKD2-208ENST00000597390 KLHL34Q8N239 644 aa17.83■□□□□ 0.45
PRKD2-208ENST00000597390 IL16Q14005 1332 aa17.83■□□□□ 0.44
PRKD2-208ENST00000597390 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
PRKD2-208ENST00000597390 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
PRKD2-208ENST00000597390 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
PRKD2-208ENST00000597390 TJP1Q07157 1748 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms