RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 SMARCC1Q92922 1105 aaPredicted RBP22.21■■□□□ 1.15
CAPN12-206ENST00000597354 SLC52A2Q9HAB3 445 aa22.21■■□□□ 1.15
CAPN12-206ENST00000597354 DCTN1Q14203 1278 aa22.2■■□□□ 1.14
CAPN12-206ENST00000597354 MCM10Q7L590 875 aa22.2■■□□□ 1.14
CAPN12-206ENST00000597354 SLC27A3Q5K4L6 730 aa22.19■■□□□ 1.14
CAPN12-206ENST00000597354 RTF1Q92541 710 aaKnown RBP22.19■■□□□ 1.14
CAPN12-206ENST00000597354 ADAMTS7Q9UKP4 1686 aa22.18■■□□□ 1.14
CAPN12-206ENST00000597354 NFE2L2Q16236 605 aa22.18■■□□□ 1.14
CAPN12-206ENST00000597354 RBM42Q9BTD8 480 aaKnown RBP22.18■■□□□ 1.14
CAPN12-206ENST00000597354 TEFQ10587 303 aa22.17■■□□□ 1.14
CAPN12-206ENST00000597354 SLC39A6Q13433 755 aa22.17■■□□□ 1.14
CAPN12-206ENST00000597354 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
CAPN12-206ENST00000597354 DLG5Q8TDM6 1919 aa22.16■■□□□ 1.14
CAPN12-206ENST00000597354 STK32BQ9NY57 414 aa22.16■■□□□ 1.14
CAPN12-206ENST00000597354 MRC1P22897 1456 aa22.15■■□□□ 1.14
CAPN12-206ENST00000597354 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
CAPN12-206ENST00000597354 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
CAPN12-206ENST00000597354 SIK1P57059 783 aa22.15■■□□□ 1.14
CAPN12-206ENST00000597354 NEUROD2Q15784 382 aa22.15■■□□□ 1.14
CAPN12-206ENST00000597354 ZNF827Q17R98 1081 aa22.15■■□□□ 1.14
CAPN12-206ENST00000597354 RUNDC1Q96C34 613 aa22.15■■□□□ 1.14
CAPN12-206ENST00000597354 PNISRQ8TF01 805 aaKnown RBP22.14■■□□□ 1.13
CAPN12-206ENST00000597354 SENP3-EIF4A1A0A087X0R7 540 aa22.13■■□□□ 1.13
CAPN12-206ENST00000597354 ATP6V1AP38606 617 aa22.13■■□□□ 1.13
CAPN12-206ENST00000597354 TMPOP42166 694 aaKnown RBP22.13■■□□□ 1.13
CAPN12-206ENST00000597354 RIPK4P57078 832 aa22.13■■□□□ 1.13
CAPN12-206ENST00000597354 SLC15A2Q16348 729 aa22.13■■□□□ 1.13
CAPN12-206ENST00000597354 THUMPD2Q9BTF0 503 aaKnown RBP22.13■■□□□ 1.13
CAPN12-206ENST00000597354 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
CAPN12-206ENST00000597354 CEMIPQ8WUJ3 1361 aa22.12■■□□□ 1.13
CAPN12-206ENST00000597354 HTATSF1O43719 755 aaKnown RBP22.12■■□□□ 1.13
CAPN12-206ENST00000597354 ITPK1Q13572 414 aa22.12■■□□□ 1.13
CAPN12-206ENST00000597354 DIEXFQ68CQ4 756 aaKnown RBP22.12■■□□□ 1.13
CAPN12-206ENST00000597354 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
CAPN12-206ENST00000597354 C5P01031 1676 aa22.11■■□□□ 1.13
CAPN12-206ENST00000597354 AKT1S1Q96B36 256 aa22.1■■□□□ 1.13
CAPN12-206ENST00000597354 PDGFDQ9GZP0 370 aaPredicted RBP22.1■■□□□ 1.13
CAPN12-206ENST00000597354 SIPA1L3O60292 1781 aaPredicted RBP22.1■■□□□ 1.13
CAPN12-206ENST00000597354 BTBD11A6QL63 1104 aa22.09■■□□□ 1.13
CAPN12-206ENST00000597354 LINC00116Q8NCU8 138 aa22.09■■□□□ 1.13
CAPN12-206ENST00000597354 TAF1LQ8IZX4 1826 aa22.08■■□□□ 1.13
CAPN12-206ENST00000597354 APAF1O14727 1248 aa22.08■■□□□ 1.13
CAPN12-206ENST00000597354 KCNQ3O43525 872 aa22.08■■□□□ 1.13
CAPN12-206ENST00000597354 FAM9BQ8IZU0 186 aa22.08■■□□□ 1.13
CAPN12-206ENST00000597354 MIS18AQ9NYP9 233 aa22.08■■□□□ 1.13
CAPN12-206ENST00000597354 TFCP2L1Q9NZI6 479 aa22.08■■□□□ 1.13
CAPN12-206ENST00000597354 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
CAPN12-206ENST00000597354 TTC5Q8N0Z6 440 aa22.07■■□□□ 1.12
CAPN12-206ENST00000597354 TAF7Q15545 349 aaPredicted RBP22.05■■□□□ 1.12
CAPN12-206ENST00000597354 ZNF790Q6PG37 636 aa22.05■■□□□ 1.12
CAPN12-206ENST00000597354 C4BP0C0L5 1744 aa22.05■■□□□ 1.12
CAPN12-206ENST00000597354 KCPQ6ZWJ8 1503 aa22.05■■□□□ 1.12
CAPN12-206ENST00000597354 AK7Q96M32 723 aa22.04■■□□□ 1.12
CAPN12-206ENST00000597354 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
CAPN12-206ENST00000597354 TUBGCP6Q96RT7 1819 aa22.03■■□□□ 1.12
CAPN12-206ENST00000597354 DNAJC10Q8IXB1 793 aa22.03■■□□□ 1.12
CAPN12-206ENST00000597354 ZNF496Q96IT1 587 aaPredicted RBP22.03■■□□□ 1.12
CAPN12-206ENST00000597354 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.12
CAPN12-206ENST00000597354 AMIGO3Q86WK7 504 aa22.02■■□□□ 1.12
CAPN12-206ENST00000597354 TJP1Q07157 1748 aa22.02■■□□□ 1.12
CAPN12-206ENST00000597354 PNPLA7Q6ZV29 1317 aa22.02■■□□□ 1.12
CAPN12-206ENST00000597354 MSH5O43196 834 aa22.01■■□□□ 1.11
CAPN12-206ENST00000597354 PHF14O94880 888 aa22.01■■□□□ 1.11
CAPN12-206ENST00000597354 MIER1Q8N108 512 aa22.01■■□□□ 1.11
CAPN12-206ENST00000597354 UBR2Q8IWV8 1755 aa22.01■■□□□ 1.11
CAPN12-206ENST00000597354 GNPATO15228 680 aa22■■□□□ 1.11
CAPN12-206ENST00000597354 ZBTB7AO95365 584 aa22■■□□□ 1.11
CAPN12-206ENST00000597354 CASZ1Q86V15 1759 aa21.99■■□□□ 1.11
CAPN12-206ENST00000597354 ZNF831Q5JPB2 1677 aa21.99■■□□□ 1.11
CAPN12-206ENST00000597354 COL23A1Q86Y22 540 aaPredicted RBP21.99■■□□□ 1.11
CAPN12-206ENST00000597354 FMNL2Q96PY5 1086 aa21.99■■□□□ 1.11
CAPN12-206ENST00000597354 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
CAPN12-206ENST00000597354 COL5A3P25940 1745 aaPredicted RBP21.99■■□□□ 1.11
CAPN12-206ENST00000597354 CRKLP46109 303 aaKnown RBP21.98■■□□□ 1.11
CAPN12-206ENST00000597354 SALL2Q9Y467 1007 aaPredicted RBP21.98■■□□□ 1.11
CAPN12-206ENST00000597354 HEG1Q9ULI3 1381 aa21.98■■□□□ 1.11
CAPN12-206ENST00000597354 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
CAPN12-206ENST00000597354 ATF5Q9Y2D1 282 aaPredicted RBP21.97■■□□□ 1.11
CAPN12-206ENST00000597354 PRAMEF22A3QJZ6 481 aa21.96■■□□□ 1.11
CAPN12-206ENST00000597354 CYP19A1P11511 503 aaPredicted RBP21.96■■□□□ 1.11
CAPN12-206ENST00000597354 VSIG10Q8N0Z9 540 aa21.96■■□□□ 1.11
CAPN12-206ENST00000597354 TSPYL4Q9UJ04 414 aa21.96■■□□□ 1.11
CAPN12-206ENST00000597354 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
CAPN12-206ENST00000597354 MYH14Q7Z406 1995 aaKnown RBP21.96■■□□□ 1.11
CAPN12-206ENST00000597354 QSER1Q2KHR3 1735 aa21.95■■□□□ 1.1
CAPN12-206ENST00000597354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.95■■□□□ 1.1
CAPN12-206ENST00000597354 CCER2I3L3R5 266 aa21.95■■□□□ 1.1
CAPN12-206ENST00000597354 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.1
CAPN12-206ENST00000597354 KDM3BQ7LBC6 1761 aa21.94■■□□□ 1.1
CAPN12-206ENST00000597354 RC3H1Q5TC82 1133 aaKnown RBP21.94■■□□□ 1.1
CAPN12-206ENST00000597354 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
CAPN12-206ENST00000597354 RTCBQ9Y3I0 505 aaKnown RBP21.94■■□□□ 1.1
CAPN12-206ENST00000597354 CICQ96RK0 1608 aaPredicted RBP21.93■■□□□ 1.1
CAPN12-206ENST00000597354 CCDC87Q9NVE4 849 aa21.93■■□□□ 1.1
CAPN12-206ENST00000597354 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
CAPN12-206ENST00000597354 USP16Q9Y5T5 823 aa21.92■■□□□ 1.1
CAPN12-206ENST00000597354 STARD3NLO95772 234 aa21.91■■□□□ 1.1
CAPN12-206ENST00000597354 SNRPA1P09661 255 aaKnown RBP21.91■■□□□ 1.1
CAPN12-206ENST00000597354 CANXP27824 592 aaKnown RBP21.91■■□□□ 1.1
CAPN12-206ENST00000597354 SSFA2P28290 1259 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms