RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
ZNF548-206ENST00000597047 ASAP1Q9ULH1 1129 aa12.17□□□□□ -0.46
ZNF548-206ENST00000597047 SCN11AQ9UI33 1791 aa12.17□□□□□ -0.46
ZNF548-206ENST00000597047 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
ZNF548-206ENST00000597047 PTCD1O75127 700 aaKnown RBP12.16□□□□□ -0.46
ZNF548-206ENST00000597047 BAG6P46379 1132 aa12.15□□□□□ -0.46
ZNF548-206ENST00000597047 KCNQ4P56696 695 aa12.15□□□□□ -0.46
ZNF548-206ENST00000597047 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
ZNF548-206ENST00000597047 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
ZNF548-206ENST00000597047 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
ZNF548-206ENST00000597047 BTAF1O14981 1849 aa12.14□□□□□ -0.47
ZNF548-206ENST00000597047 KCNQ3O43525 872 aa12.14□□□□□ -0.47
ZNF548-206ENST00000597047 EZH2Q15910 746 aaKnown RBP12.14□□□□□ -0.47
ZNF548-206ENST00000597047 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
ZNF548-206ENST00000597047 TSPYL4Q9UJ04 414 aa12.14□□□□□ -0.47
ZNF548-206ENST00000597047 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
ZNF548-206ENST00000597047 WWC1Q8IX03 1113 aa12.13□□□□□ -0.47
ZNF548-206ENST00000597047 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-206ENST00000597047 CALD1Q05682 793 aaKnown RBP12.12□□□□□ -0.47
ZNF548-206ENST00000597047 CCDC125Q86Z20 511 aa12.12□□□□□ -0.47
ZNF548-206ENST00000597047 BCL9O00512 1426 aa12.11□□□□□ -0.47
ZNF548-206ENST00000597047 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
ZNF548-206ENST00000597047 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
ZNF548-206ENST00000597047 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
ZNF548-206ENST00000597047 CCNL1Q9UK58 526 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-206ENST00000597047 EP400Q96L91 3159 aa12.1□□□□□ -0.47
ZNF548-206ENST00000597047 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
ZNF548-206ENST00000597047 ELL2O00472 640 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-206ENST00000597047 GNAI1P63096 354 aa12.1□□□□□ -0.47
ZNF548-206ENST00000597047 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
ZNF548-206ENST00000597047 ZNF790Q6PG37 636 aa12.1□□□□□ -0.47
ZNF548-206ENST00000597047 TNS1Q9HBL0 1735 aaKnown RBP12.09□□□□□ -0.47
ZNF548-206ENST00000597047 LOC102724428A0A0B4J2F2 783 aa12.09□□□□□ -0.47
ZNF548-206ENST00000597047 SIK1P57059 783 aa12.09□□□□□ -0.47
ZNF548-206ENST00000597047 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
ZNF548-206ENST00000597047 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
ZNF548-206ENST00000597047 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
ZNF548-206ENST00000597047 NECTIN2Q92692 538 aa12.09□□□□□ -0.47
ZNF548-206ENST00000597047 ZNF496Q96IT1 587 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-206ENST00000597047 MBIPQ9NS73 344 aa12.09□□□□□ -0.47
ZNF548-206ENST00000597047 PLSCR1O15162 318 aa12.08□□□□□ -0.48
ZNF548-206ENST00000597047 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
ZNF548-206ENST00000597047 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
ZNF548-206ENST00000597047 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
ZNF548-206ENST00000597047 IFT57Q9NWB7 429 aa12.08□□□□□ -0.48
ZNF548-206ENST00000597047 SIPA1L3O60292 1781 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-206ENST00000597047 ADAMTS7Q9UKP4 1686 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
ZNF548-206ENST00000597047 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 DNAJC10Q8IXB1 793 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 NGEFQ8N5V2 710 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 ARXQ96QS3 562 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-206ENST00000597047 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-206ENST00000597047 SRCAPQ6ZRS2 3230 aa12.07□□□□□ -0.48
ZNF548-206ENST00000597047 CHL1O00533 1208 aa12.06□□□□□ -0.48
ZNF548-206ENST00000597047 MSH5O43196 834 aa12.06□□□□□ -0.48
ZNF548-206ENST00000597047 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
ZNF548-206ENST00000597047 PROM2Q8N271 834 aa12.06□□□□□ -0.48
ZNF548-206ENST00000597047 MYH16Q9H6N6 1097 aa12.06□□□□□ -0.48
ZNF548-206ENST00000597047 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
ZNF548-206ENST00000597047 MRC1P22897 1456 aa12.06□□□□□ -0.48
ZNF548-206ENST00000597047 ITPK1Q13572 414 aa12.05□□□□□ -0.48
ZNF548-206ENST00000597047 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
ZNF548-206ENST00000597047 TCERG1O14776 1098 aaKnown RBP12.04□□□□□ -0.48
ZNF548-206ENST00000597047 PHF14O94880 888 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
ZNF548-206ENST00000597047 ZNF853P0CG23 659 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 CANXP27824 592 aaKnown RBP12.04□□□□□ -0.48
ZNF548-206ENST00000597047 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-206ENST00000597047 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
ZNF548-206ENST00000597047 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
ZNF548-206ENST00000597047 NBPF14Q5TI25 921 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 SMIM5Q71RC9 77 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 LINC00116Q8NCU8 138 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 AK7Q96M32 723 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 STK32BQ9NY57 414 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 USP16Q9Y5T5 823 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 IL16Q14005 1332 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 FANCIQ9NVI1 1328 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 HEG1Q9ULI3 1381 aa12.04□□□□□ -0.48
ZNF548-206ENST00000597047 E9PSI1 815 aa12.03□□□□□ -0.48
ZNF548-206ENST00000597047 STARD3NLO95772 234 aa12.03□□□□□ -0.48
ZNF548-206ENST00000597047 SLFN5Q08AF3 891 aa12.03□□□□□ -0.48
ZNF548-206ENST00000597047 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
ZNF548-206ENST00000597047 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
ZNF548-206ENST00000597047 C8orf58Q8NAV2 365 aa12.03□□□□□ -0.48
ZNF548-206ENST00000597047 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
ZNF548-206ENST00000597047 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.48
ZNF548-206ENST00000597047 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.49
ZNF548-206ENST00000597047 A1BGP04217 495 aa12.02□□□□□ -0.49
ZNF548-206ENST00000597047 MYL6BP14649 208 aa12.02□□□□□ -0.49
ZNF548-206ENST00000597047 NPM2Q86SE8 214 aaKnown RBP12.02□□□□□ -0.49
ZNF548-206ENST00000597047 TFCP2L1Q9NZI6 479 aa12.02□□□□□ -0.49
ZNF548-206ENST00000597047 ZNF521Q96K83 1311 aa12.02□□□□□ -0.49
ZNF548-206ENST00000597047 LY75O60449 1722 aa12.02□□□□□ -0.49
ZNF548-206ENST00000597047 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
ZNF548-206ENST00000597047 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms