RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
LINC00343-204ENST00000596398 UNC13BO14795 1591 aa11.92□□□□□ -0.5
LINC00343-204ENST00000596398 SOS2Q07890 1332 aaPredicted RBP11.91□□□□□ -0.5
LINC00343-204ENST00000596398 LAMC1P11047 1609 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 GDF9O60383 454 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 DGAT1O75907 488 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 GCGRP47871 477 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 ORAI2Q96SN7 254 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 GLI3P10071 1580 aa11.91□□□□□ -0.5
LINC00343-204ENST00000596398 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
LINC00343-204ENST00000596398 C1orf167Q5SNV9 1468 aa11.9□□□□□ -0.5
LINC00343-204ENST00000596398 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
LINC00343-204ENST00000596398 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
LINC00343-204ENST00000596398 CHIC2Q9UKJ5 165 aa11.9□□□□□ -0.5
LINC00343-204ENST00000596398 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
LINC00343-204ENST00000596398 ADGRL3Q9HAR2 1447 aa11.89□□□□□ -0.51
LINC00343-204ENST00000596398 MYT1Q01538 1121 aa11.89□□□□□ -0.51
LINC00343-204ENST00000596398 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
LINC00343-204ENST00000596398 NRXN3Q9Y4C0 1643 aa11.89□□□□□ -0.51
LINC00343-204ENST00000596398 MYOM2P54296 1465 aa11.89□□□□□ -0.51
LINC00343-204ENST00000596398 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
LINC00343-204ENST00000596398 UTRNP46939 3433 aa11.88□□□□□ -0.51
LINC00343-204ENST00000596398 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
LINC00343-204ENST00000596398 FAM187AA6NFU0 413 aa11.87□□□□□ -0.51
LINC00343-204ENST00000596398 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
LINC00343-204ENST00000596398 R3HDM1Q15032 1099 aaKnown RBP11.87□□□□□ -0.51
LINC00343-204ENST00000596398 METP08581 1390 aa11.87□□□□□ -0.51
LINC00343-204ENST00000596398 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
LINC00343-204ENST00000596398 DAPK1P53355 1430 aa11.86□□□□□ -0.51
LINC00343-204ENST00000596398 SPHKAPQ2M3C7 1700 aa11.86□□□□□ -0.51
LINC00343-204ENST00000596398 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
LINC00343-204ENST00000596398 SEPT12Q8IYM1 358 aa11.86□□□□□ -0.51
LINC00343-204ENST00000596398 FAM160A2Q8N612 972 aaPredicted RBP11.86□□□□□ -0.51
LINC00343-204ENST00000596398 FCF1Q9Y324 198 aaKnown RBP11.86□□□□□ -0.51
LINC00343-204ENST00000596398 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
LINC00343-204ENST00000596398 ANKRD30AQ9BXX3 1397 aa11.84□□□□□ -0.51
LINC00343-204ENST00000596398 RPIAP49247 311 aa11.84□□□□□ -0.51
LINC00343-204ENST00000596398 XPCQ01831 940 aaPredicted RBP11.84□□□□□ -0.51
LINC00343-204ENST00000596398 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
LINC00343-204ENST00000596398 PTPN23Q9H3S7 1636 aa11.84□□□□□ -0.51
LINC00343-204ENST00000596398 BAG6P46379 1132 aa11.83□□□□□ -0.52
LINC00343-204ENST00000596398 FOXC1Q12948 553 aa11.83□□□□□ -0.52
LINC00343-204ENST00000596398 BRICD5Q6PL45 260 aa11.83□□□□□ -0.52
LINC00343-204ENST00000596398 PRDM9Q9NQV7 894 aa11.83□□□□□ -0.52
LINC00343-204ENST00000596398 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
LINC00343-204ENST00000596398 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
LINC00343-204ENST00000596398 KRT27Q7Z3Y8 459 aa11.82□□□□□ -0.52
LINC00343-204ENST00000596398 E9PCH4 1651 aa11.81□□□□□ -0.52
LINC00343-204ENST00000596398 SLIT2O94813 1529 aa11.81□□□□□ -0.52
LINC00343-204ENST00000596398 MAP2K5Q13163 448 aa11.81□□□□□ -0.52
LINC00343-204ENST00000596398 GRIPAP1Q4V328 841 aa11.81□□□□□ -0.52
LINC00343-204ENST00000596398 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
LINC00343-204ENST00000596398 PXDNQ92626 1479 aa11.8□□□□□ -0.52
LINC00343-204ENST00000596398 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
LINC00343-204ENST00000596398 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
LINC00343-204ENST00000596398 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
LINC00343-204ENST00000596398 TULP1O00294 542 aaPredicted RBP11.78□□□□□ -0.52
LINC00343-204ENST00000596398 CD46P15529 392 aa11.78□□□□□ -0.52
LINC00343-204ENST00000596398 FAM182BQ5T319 152 aa11.78□□□□□ -0.52
LINC00343-204ENST00000596398 ZNF775Q96BV0 537 aaPredicted RBP11.78□□□□□ -0.52
LINC00343-204ENST00000596398 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
LINC00343-204ENST00000596398 FOXO3O43524 673 aa11.77□□□□□ -0.53
LINC00343-204ENST00000596398 ESCO1Q5FWF5 840 aa11.77□□□□□ -0.53
LINC00343-204ENST00000596398 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
LINC00343-204ENST00000596398 ROBO2Q9HCK4 1378 aa11.77□□□□□ -0.53
LINC00343-204ENST00000596398 IQGAP3Q86VI3 1631 aa11.76□□□□□ -0.53
LINC00343-204ENST00000596398 POTECB2RU33 542 aa11.76□□□□□ -0.53
LINC00343-204ENST00000596398 IRF6O14896 467 aa11.76□□□□□ -0.53
LINC00343-204ENST00000596398 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
LINC00343-204ENST00000596398 VPS72Q15906 364 aa11.76□□□□□ -0.53
LINC00343-204ENST00000596398 RGPD1P0DJD0 1748 aa11.76□□□□□ -0.53
LINC00343-204ENST00000596398 ANKRD50Q9ULJ7 1429 aa11.76□□□□□ -0.53
LINC00343-204ENST00000596398 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
LINC00343-204ENST00000596398 EZH2Q15910 746 aaKnown RBP11.75□□□□□ -0.53
LINC00343-204ENST00000596398 Q3C1V9 767 aa11.75□□□□□ -0.53
LINC00343-204ENST00000596398 ZNF326Q5BKZ1 582 aaKnown RBP11.75□□□□□ -0.53
LINC00343-204ENST00000596398 PLCH1Q4KWH8 1693 aa11.75□□□□□ -0.53
LINC00343-204ENST00000596398 CAMTA1Q9Y6Y1 1673 aa11.75□□□□□ -0.53
LINC00343-204ENST00000596398 MDM2Q00987 491 aaPredicted RBP11.74□□□□□ -0.53
LINC00343-204ENST00000596398 AAASQ9NRG9 546 aa11.74□□□□□ -0.53
LINC00343-204ENST00000596398 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
LINC00343-204ENST00000596398 KDM4AO75164 1064 aa11.73□□□□□ -0.53
LINC00343-204ENST00000596398 ADGRL2O95490 1459 aa11.73□□□□□ -0.53
LINC00343-204ENST00000596398 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
LINC00343-204ENST00000596398 ZNF784Q8NCA9 323 aaPredicted RBP11.73□□□□□ -0.53
LINC00343-204ENST00000596398 TOR4AQ9NXH8 423 aa11.73□□□□□ -0.53
LINC00343-204ENST00000596398 VPS8Q8N3P4 1428 aa11.72□□□□□ -0.53
LINC00343-204ENST00000596398 MINK1Q8N4C8 1332 aaPredicted RBP11.72□□□□□ -0.53
LINC00343-204ENST00000596398 ZBTB24O43167 697 aaPredicted RBP11.72□□□□□ -0.53
LINC00343-204ENST00000596398 CYP4X1Q8N118 509 aa11.72□□□□□ -0.53
LINC00343-204ENST00000596398 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
LINC00343-204ENST00000596398 NWD2Q9ULI1 1742 aa11.71□□□□□ -0.54
LINC00343-204ENST00000596398 SPATA31A3Q5VYP0 1347 aa11.7□□□□□ -0.54
LINC00343-204ENST00000596398 MMP16P51512 607 aa11.7□□□□□ -0.54
LINC00343-204ENST00000596398 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
LINC00343-204ENST00000596398 PPP1R1BQ9UD71 204 aaPredicted RBP11.7□□□□□ -0.54
LINC00343-204ENST00000596398 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
LINC00343-204ENST00000596398 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms