RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 MRC1P22897 1456 aa19.63■□□□□ 0.73
DDX49-204ENST00000595858 VIRMAQ69YN4 1812 aaKnown RBP19.63■□□□□ 0.73
DDX49-204ENST00000595858 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
DDX49-204ENST00000595858 PLSCR1O15162 318 aa19.62■□□□□ 0.73
DDX49-204ENST00000595858 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
DDX49-204ENST00000595858 PELP1Q8IZL8 1130 aaKnown RBP19.62■□□□□ 0.73
DDX49-204ENST00000595858 ASAP1Q9ULH1 1129 aa19.62■□□□□ 0.73
DDX49-204ENST00000595858 BAG6P46379 1132 aa19.61■□□□□ 0.73
DDX49-204ENST00000595858 TNS1Q9HBL0 1735 aaKnown RBP19.61■□□□□ 0.73
DDX49-204ENST00000595858 BTAF1O14981 1849 aa19.61■□□□□ 0.73
DDX49-204ENST00000595858 TAF7Q15545 349 aaPredicted RBP19.6■□□□□ 0.73
DDX49-204ENST00000595858 DEFB132Q7Z7B7 95 aa19.6■□□□□ 0.73
DDX49-204ENST00000595858 NGEFQ8N5V2 710 aa19.6■□□□□ 0.73
DDX49-204ENST00000595858 ATG3Q9NT62 314 aa19.6■□□□□ 0.73
DDX49-204ENST00000595858 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
DDX49-204ENST00000595858 SOCS7O14512 581 aa19.59■□□□□ 0.73
DDX49-204ENST00000595858 EN1Q05925 392 aaPredicted RBP19.59■□□□□ 0.73
DDX49-204ENST00000595858 SMARCC1Q92922 1105 aaPredicted RBP19.59■□□□□ 0.73
DDX49-204ENST00000595858 BTBD11A6QL63 1104 aa19.58■□□□□ 0.73
DDX49-204ENST00000595858 SLC39A6Q13433 755 aa19.58■□□□□ 0.73
DDX49-204ENST00000595858 CAMKK2Q96RR4 588 aa19.58■□□□□ 0.72
DDX49-204ENST00000595858 PALLDQ8WX93 1383 aa19.57■□□□□ 0.72
DDX49-204ENST00000595858 MIS18AQ9NYP9 233 aa19.56■□□□□ 0.72
DDX49-204ENST00000595858 SIPA1L3O60292 1781 aaPredicted RBP19.56■□□□□ 0.72
DDX49-204ENST00000595858 EZH2Q15910 746 aaKnown RBP19.56■□□□□ 0.72
DDX49-204ENST00000595858 ZNF790Q6PG37 636 aa19.56■□□□□ 0.72
DDX49-204ENST00000595858 PROM2Q8N271 834 aa19.56■□□□□ 0.72
DDX49-204ENST00000595858 CALD1Q05682 793 aaKnown RBP19.55■□□□□ 0.72
DDX49-204ENST00000595858 KCNQ3O43525 872 aa19.54■□□□□ 0.72
DDX49-204ENST00000595858 TXNRD1Q16881 649 aa19.54■□□□□ 0.72
DDX49-204ENST00000595858 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
DDX49-204ENST00000595858 TTC5Q8N0Z6 440 aa19.54■□□□□ 0.72
DDX49-204ENST00000595858 BABAM1Q9NWV8 329 aa19.54■□□□□ 0.72
DDX49-204ENST00000595858 LAS1LQ9Y4W2 734 aaKnown RBP19.54■□□□□ 0.72
DDX49-204ENST00000595858 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
DDX49-204ENST00000595858 CHL1O00533 1208 aa19.53■□□□□ 0.72
DDX49-204ENST00000595858 SIK1P57059 783 aa19.53■□□□□ 0.72
DDX49-204ENST00000595858 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
DDX49-204ENST00000595858 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
DDX49-204ENST00000595858 RBM42Q9BTD8 480 aaKnown RBP19.53■□□□□ 0.72
DDX49-204ENST00000595858 TSPYL4Q9UJ04 414 aa19.52■□□□□ 0.72
DDX49-204ENST00000595858 ZNF853P0CG23 659 aa19.52■□□□□ 0.71
DDX49-204ENST00000595858 SLC27A3Q5K4L6 730 aa19.52■□□□□ 0.71
DDX49-204ENST00000595858 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
DDX49-204ENST00000595858 KCNQ4P56696 695 aa19.51■□□□□ 0.71
DDX49-204ENST00000595858 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
DDX49-204ENST00000595858 ZNF496Q96IT1 587 aaPredicted RBP19.51■□□□□ 0.71
DDX49-204ENST00000595858 SLC4A9Q96Q91 983 aa19.51■□□□□ 0.71
DDX49-204ENST00000595858 LRRC4BQ9NT99 713 aa19.51■□□□□ 0.71
DDX49-204ENST00000595858 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
DDX49-204ENST00000595858 CCNL1Q9UK58 526 aaPredicted RBP19.51■□□□□ 0.71
DDX49-204ENST00000595858 GNAI1P63096 354 aa19.5■□□□□ 0.71
DDX49-204ENST00000595858 IL16Q14005 1332 aa19.5■□□□□ 0.71
DDX49-204ENST00000595858 PAPPAQ13219 1627 aa19.5■□□□□ 0.71
DDX49-204ENST00000595858 RGPD3A6NKT7 1758 aaPredicted RBP19.49■□□□□ 0.71
DDX49-204ENST00000595858 RGPD4Q7Z3J3 1758 aa19.49■□□□□ 0.71
DDX49-204ENST00000595858 LY75O60449 1722 aa19.49■□□□□ 0.71
DDX49-204ENST00000595858 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
DDX49-204ENST00000595858 FMNL2Q96PY5 1086 aa19.49■□□□□ 0.71
DDX49-204ENST00000595858 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
DDX49-204ENST00000595858 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
DDX49-204ENST00000595858 EIF4A1P60842 406 aaKnown RBP19.48■□□□□ 0.71
DDX49-204ENST00000595858 VSIG10Q8N0Z9 540 aa19.48■□□□□ 0.71
DDX49-204ENST00000595858 ITPK1Q13572 414 aa19.46■□□□□ 0.71
DDX49-204ENST00000595858 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
DDX49-204ENST00000595858 HEG1Q9ULI3 1381 aa19.46■□□□□ 0.71
DDX49-204ENST00000595858 KDM3BQ7LBC6 1761 aa19.46■□□□□ 0.7
DDX49-204ENST00000595858 UBR2Q8IWV8 1755 aa19.46■□□□□ 0.7
DDX49-204ENST00000595858 GOLGA2Q08379 1002 aa19.45■□□□□ 0.7
DDX49-204ENST00000595858 SNRPA1P09661 255 aaKnown RBP19.44■□□□□ 0.7
DDX49-204ENST00000595858 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
DDX49-204ENST00000595858 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
DDX49-204ENST00000595858 HMGB2P26583 209 aaKnown RBP19.43■□□□□ 0.7
DDX49-204ENST00000595858 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
DDX49-204ENST00000595858 GIGYF1O75420 1035 aaPredicted RBP19.43■□□□□ 0.7
DDX49-204ENST00000595858 RREB1Q92766 1687 aa19.43■□□□□ 0.7
DDX49-204ENST00000595858 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
DDX49-204ENST00000595858 ZNF831Q5JPB2 1677 aa19.42■□□□□ 0.7
DDX49-204ENST00000595858 TEX13AQ9BXU3 409 aaPredicted RBP19.42■□□□□ 0.7
DDX49-204ENST00000595858 KRT24Q2M2I5 525 aa19.41■□□□□ 0.7
DDX49-204ENST00000595858 CDCA7LQ96GN5 454 aa19.41■□□□□ 0.7
DDX49-204ENST00000595858 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
DDX49-204ENST00000595858 USP16Q9Y5T5 823 aa19.41■□□□□ 0.7
DDX49-204ENST00000595858 GTF3C3Q9Y5Q9 886 aa19.41■□□□□ 0.7
DDX49-204ENST00000595858 ZBED9Q6R2W3 1325 aa19.4■□□□□ 0.7
DDX49-204ENST00000595858 FANCIQ9NVI1 1328 aa19.4■□□□□ 0.7
DDX49-204ENST00000595858 E9PSI1 815 aa19.4■□□□□ 0.7
DDX49-204ENST00000595858 CYP19A1P11511 503 aaPredicted RBP19.4■□□□□ 0.7
DDX49-204ENST00000595858 SLFN5Q08AF3 891 aa19.4■□□□□ 0.7
DDX49-204ENST00000595858 NUP188Q5SRE5 1749 aa19.4■□□□□ 0.7
DDX49-204ENST00000595858 STARD3NLO95772 234 aa19.39■□□□□ 0.7
DDX49-204ENST00000595858 NBPF14Q5TI25 921 aa19.39■□□□□ 0.7
DDX49-204ENST00000595858 AKT1S1Q96B36 256 aa19.39■□□□□ 0.7
DDX49-204ENST00000595858 ANO8Q9HCE9 1232 aaPredicted RBP19.39■□□□□ 0.7
DDX49-204ENST00000595858 TAF1LQ8IZX4 1826 aa19.38■□□□□ 0.69
DDX49-204ENST00000595858 TJP1Q07157 1748 aa19.38■□□□□ 0.69
DDX49-204ENST00000595858 CRKLP46109 303 aaKnown RBP19.38■□□□□ 0.69
DDX49-204ENST00000595858 ZNF827Q17R98 1081 aa19.38■□□□□ 0.69
DDX49-204ENST00000595858 RC3H1Q5TC82 1133 aaKnown RBP19.38■□□□□ 0.69
DDX49-204ENST00000595858 DUSP27Q5VZP5 1158 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms