RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MCCP23508 829 aa16.17■□□□□ 0.18
VRK3-209ENST00000594948 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
VRK3-209ENST00000594948 GNAI2P04899 355 aa16.17■□□□□ 0.18
VRK3-209ENST00000594948 MCM10Q7L590 875 aa16.17■□□□□ 0.18
VRK3-209ENST00000594948 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
VRK3-209ENST00000594948 KDRP35968 1356 aa16.16■□□□□ 0.18
VRK3-209ENST00000594948 AOX1Q06278 1338 aa16.16■□□□□ 0.18
VRK3-209ENST00000594948 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
VRK3-209ENST00000594948 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
VRK3-209ENST00000594948 BRD1O95696 1058 aa16.15■□□□□ 0.18
VRK3-209ENST00000594948 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
VRK3-209ENST00000594948 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
VRK3-209ENST00000594948 GNAI3P08754 354 aa16.15■□□□□ 0.18
VRK3-209ENST00000594948 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
VRK3-209ENST00000594948 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
VRK3-209ENST00000594948 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
VRK3-209ENST00000594948 STAP2Q9UGK3 403 aa16.15■□□□□ 0.18
VRK3-209ENST00000594948 USP54Q70EL1 1684 aa16.15■□□□□ 0.18
VRK3-209ENST00000594948 TTC21AQ8NDW8 1320 aa16.13■□□□□ 0.17
VRK3-209ENST00000594948 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
VRK3-209ENST00000594948 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
VRK3-209ENST00000594948 NEK4P51957 841 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 CSPP1Q1MSJ5 1256 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 RTF1Q92541 710 aaKnown RBP16.12■□□□□ 0.17
VRK3-209ENST00000594948 TMEM63CQ9P1W3 806 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 ADAMTS13Q76LX8 1427 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 PTPRUQ92729 1446 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 ACEP12821 1306 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 FLT4P35916 1363 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 ROBO2Q9HCK4 1378 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
VRK3-209ENST00000594948 PDCL3Q9H2J4 239 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 CCDC39Q9UFE4 941 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 ZKSCAN5Q9Y2L8 839 aa16.12■□□□□ 0.17
VRK3-209ENST00000594948 CRYBG1Q9Y4K1 1723 aa16.11■□□□□ 0.17
VRK3-209ENST00000594948 APBB1O00213 710 aa16.11■□□□□ 0.17
VRK3-209ENST00000594948 MX1P20591 662 aa16.11■□□□□ 0.17
VRK3-209ENST00000594948 G2E3Q7L622 706 aa16.11■□□□□ 0.17
VRK3-209ENST00000594948 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
VRK3-209ENST00000594948 TMEM2Q9UHN6 1383 aa16.1■□□□□ 0.17
VRK3-209ENST00000594948 CHMLP26374 656 aa16.1■□□□□ 0.17
VRK3-209ENST00000594948 HSP90AB2PQ58FF8 381 aa16.1■□□□□ 0.17
VRK3-209ENST00000594948 BABAM1Q9NWV8 329 aa16.1■□□□□ 0.17
VRK3-209ENST00000594948 RBM27Q9P2N5 1060 aaKnown RBP16.1■□□□□ 0.17
VRK3-209ENST00000594948 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
VRK3-209ENST00000594948 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.1■□□□□ 0.17
VRK3-209ENST00000594948 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
VRK3-209ENST00000594948 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
VRK3-209ENST00000594948 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
VRK3-209ENST00000594948 SLC4A10Q6U841 1118 aa16.09■□□□□ 0.17
VRK3-209ENST00000594948 PLEKHG5O94827 1062 aa16.08■□□□□ 0.17
VRK3-209ENST00000594948 PHF14O94880 888 aa16.08■□□□□ 0.17
VRK3-209ENST00000594948 MAP7D2Q96T17 732 aa16.08■□□□□ 0.17
VRK3-209ENST00000594948 PIK3C2AO00443 1686 aa16.08■□□□□ 0.16
VRK3-209ENST00000594948 TCHHQ07283 1943 aa16.08■□□□□ 0.16
VRK3-209ENST00000594948 TNRQ92752 1358 aa16.08■□□□□ 0.16
VRK3-209ENST00000594948 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.16
VRK3-209ENST00000594948 CEP170BQ9Y4F5 1589 aaPredicted RBP16.08■□□□□ 0.16
VRK3-209ENST00000594948 SYCE3A1L190 88 aa16.08■□□□□ 0.16
VRK3-209ENST00000594948 F6X3S4 739 aa16.08■□□□□ 0.16
VRK3-209ENST00000594948 EXOC6BQ9Y2D4 811 aa16.08■□□□□ 0.16
VRK3-209ENST00000594948 MARF1Q9Y4F3 1742 aaKnown RBP16.07■□□□□ 0.16
VRK3-209ENST00000594948 FLIIQ13045 1269 aa16.07■□□□□ 0.16
VRK3-209ENST00000594948 TSPY26PQ9H489 355 aa16.07■□□□□ 0.16
VRK3-209ENST00000594948 WDR33Q9C0J8 1336 aaKnown RBP16.07■□□□□ 0.16
VRK3-209ENST00000594948 UVSSAQ2YD98 709 aa16.06■□□□□ 0.16
VRK3-209ENST00000594948 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
VRK3-209ENST00000594948 PALD1Q9ULE6 856 aa16.06■□□□□ 0.16
VRK3-209ENST00000594948 RAB11FIP3O75154 756 aa16.05■□□□□ 0.16
VRK3-209ENST00000594948 FAM184AQ8NB25 1140 aa16.05■□□□□ 0.16
VRK3-209ENST00000594948 ANO2Q9NQ90 1003 aa16.05■□□□□ 0.16
VRK3-209ENST00000594948 NSFL1CQ9UNZ2 370 aaKnown RBP16.05■□□□□ 0.16
VRK3-209ENST00000594948 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
VRK3-209ENST00000594948 HSPA4P34932 840 aa16.05■□□□□ 0.16
VRK3-209ENST00000594948 FAM69CQ0P6D2 419 aa16.05■□□□□ 0.16
VRK3-209ENST00000594948 CHD2O14647 1828 aaKnown RBP16.04■□□□□ 0.16
VRK3-209ENST00000594948 PNMA6EA0A0J9YXQ4 647 aa16.03■□□□□ 0.16
VRK3-209ENST00000594948 TRIM6-TRIM34B2RNG4 842 aa16.03■□□□□ 0.16
VRK3-209ENST00000594948 FKBP5Q13451 457 aaPredicted RBP16.03■□□□□ 0.16
VRK3-209ENST00000594948 NWD1Q149M9 1564 aa16.03■□□□□ 0.16
VRK3-209ENST00000594948 SSH3Q8TE77 659 aa16.03■□□□□ 0.16
VRK3-209ENST00000594948 MIS18AQ9NYP9 233 aa16.03■□□□□ 0.16
VRK3-209ENST00000594948 FOXO3O43524 673 aa16.03■□□□□ 0.16
VRK3-209ENST00000594948 RILPL2Q969X0 211 aa16.03■□□□□ 0.16
VRK3-209ENST00000594948 KDM3BQ7LBC6 1761 aa16.02■□□□□ 0.16
VRK3-209ENST00000594948 DIP2AQ14689 1571 aa16.02■□□□□ 0.16
VRK3-209ENST00000594948 LETM1O95202 739 aaPredicted RBP16.02■□□□□ 0.16
VRK3-209ENST00000594948 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.16
VRK3-209ENST00000594948 RPAP1Q9BWH6 1393 aaPredicted RBP16.01■□□□□ 0.15
VRK3-209ENST00000594948 GNAT3A8MTJ3 354 aa16.01■□□□□ 0.15
VRK3-209ENST00000594948 EYA1Q99502 592 aa16.01■□□□□ 0.15
VRK3-209ENST00000594948 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
VRK3-209ENST00000594948 R3HCC1Q9Y3T6 440 aaKnown RBP16.01■□□□□ 0.15
VRK3-209ENST00000594948 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
VRK3-209ENST00000594948 RAD50Q92878 1312 aa16.01■□□□□ 0.15
VRK3-209ENST00000594948 POLA2Q14181 598 aa16.01■□□□□ 0.15
VRK3-209ENST00000594948 LRRFIP2Q9Y608 721 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms