RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 PLEKHG2Q9H7P9 1386 aa19.65■□□□□ 0.74
CNN1-210ENST00000592923 FLIIQ13045 1269 aa19.65■□□□□ 0.74
CNN1-210ENST00000592923 ANKRD45Q5TZF3 282 aa19.65■□□□□ 0.74
CNN1-210ENST00000592923 AXIN2Q9Y2T1 843 aa19.65■□□□□ 0.74
CNN1-210ENST00000592923 CEP85Q6P2H3 762 aa19.65■□□□□ 0.74
CNN1-210ENST00000592923 TBC1D32Q96NH3 1257 aa19.65■□□□□ 0.74
CNN1-210ENST00000592923 MEIS3Q99687 375 aa19.64■□□□□ 0.73
CNN1-210ENST00000592923 DCTPP1Q9H773 170 aa19.64■□□□□ 0.73
CNN1-210ENST00000592923 BMP2KLQ5H9B9 411 aa19.63■□□□□ 0.73
CNN1-210ENST00000592923 C1orf141Q5JVX7 400 aa19.63■□□□□ 0.73
CNN1-210ENST00000592923 CHMP4AQ9BY43 222 aa19.62■□□□□ 0.73
CNN1-210ENST00000592923 LGR6Q9HBX8 967 aa19.62■□□□□ 0.73
CNN1-210ENST00000592923 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
CNN1-210ENST00000592923 PLEKHG5O94827 1062 aa19.62■□□□□ 0.73
CNN1-210ENST00000592923 EIF4A1P60842 406 aaKnown RBP19.62■□□□□ 0.73
CNN1-210ENST00000592923 TEFQ10587 303 aa19.62■□□□□ 0.73
CNN1-210ENST00000592923 HDGFL1Q5TGJ6 251 aa19.62■□□□□ 0.73
CNN1-210ENST00000592923 F6X3S4 739 aa19.61■□□□□ 0.73
CNN1-210ENST00000592923 RNMTO43148 476 aaKnown RBP19.61■□□□□ 0.73
CNN1-210ENST00000592923 FKBP5Q13451 457 aaPredicted RBP19.61■□□□□ 0.73
CNN1-210ENST00000592923 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
CNN1-210ENST00000592923 SLC4A10Q6U841 1118 aa19.6■□□□□ 0.73
CNN1-210ENST00000592923 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
CNN1-210ENST00000592923 SPATA31A3Q5VYP0 1347 aa19.6■□□□□ 0.73
CNN1-210ENST00000592923 CPDO75976 1380 aa19.6■□□□□ 0.73
CNN1-210ENST00000592923 HMMRO75330 724 aa19.58■□□□□ 0.73
CNN1-210ENST00000592923 MPRIPQ6WCQ1 1025 aa19.58■□□□□ 0.73
CNN1-210ENST00000592923 SCN11AQ9UI33 1791 aa19.58■□□□□ 0.73
CNN1-210ENST00000592923 PKD1L3Q7Z443 1732 aa19.58■□□□□ 0.73
CNN1-210ENST00000592923 BTBD11A6QL63 1104 aa19.58■□□□□ 0.72
CNN1-210ENST00000592923 NECTIN2Q92692 538 aa19.58■□□□□ 0.72
CNN1-210ENST00000592923 GNAI2P04899 355 aa19.56■□□□□ 0.72
CNN1-210ENST00000592923 GNAI3P08754 354 aa19.56■□□□□ 0.72
CNN1-210ENST00000592923 MEGF6O75095 1541 aa19.56■□□□□ 0.72
CNN1-210ENST00000592923 HEG1Q9ULI3 1381 aa19.56■□□□□ 0.72
CNN1-210ENST00000592923 BECN1Q14457 450 aa19.55■□□□□ 0.72
CNN1-210ENST00000592923 BRINP3Q76B58 766 aa19.55■□□□□ 0.72
CNN1-210ENST00000592923 MRC1P22897 1456 aa19.55■□□□□ 0.72
CNN1-210ENST00000592923 KDM4FA0A1W2PPD8 638 aa19.55■□□□□ 0.72
CNN1-210ENST00000592923 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
CNN1-210ENST00000592923 SLC4A3P48751 1232 aa19.54■□□□□ 0.72
CNN1-210ENST00000592923 MFAP1P55081 439 aaKnown RBP19.54■□□□□ 0.72
CNN1-210ENST00000592923 ABCA3Q99758 1704 aa19.53■□□□□ 0.72
CNN1-210ENST00000592923 PARP4Q9UKK3 1724 aaKnown RBP19.53■□□□□ 0.72
CNN1-210ENST00000592923 KCNQ3O43525 872 aa19.53■□□□□ 0.72
CNN1-210ENST00000592923 NBR1Q14596 966 aa19.53■□□□□ 0.72
CNN1-210ENST00000592923 C22orf23Q9BZE7 217 aa19.53■□□□□ 0.72
CNN1-210ENST00000592923 NLRP2Q9NX02 1062 aa19.53■□□□□ 0.72
CNN1-210ENST00000592923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.72
CNN1-210ENST00000592923 KDM6AO15550 1401 aaPredicted RBP19.53■□□□□ 0.72
CNN1-210ENST00000592923 PLEKHM2Q8IWE5 1019 aa19.53■□□□□ 0.72
CNN1-210ENST00000592923 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.72
CNN1-210ENST00000592923 CHPF2Q9P2E5 772 aa19.52■□□□□ 0.72
CNN1-210ENST00000592923 CABLES1Q8TDN4 633 aa19.51■□□□□ 0.71
CNN1-210ENST00000592923 EIF2S2P20042 333 aaKnown RBP19.51■□□□□ 0.71
CNN1-210ENST00000592923 PHAXQ9H814 394 aaKnown RBP19.51■□□□□ 0.71
CNN1-210ENST00000592923 SPG7Q9UQ90 795 aa19.51■□□□□ 0.71
CNN1-210ENST00000592923 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
CNN1-210ENST00000592923 CSB-PGBD3P0DP91 1061 aa19.49■□□□□ 0.71
CNN1-210ENST00000592923 TTC22Q5TAA0 569 aa19.49■□□□□ 0.71
CNN1-210ENST00000592923 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
CNN1-210ENST00000592923 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
CNN1-210ENST00000592923 GIGYF1O75420 1035 aaPredicted RBP19.48■□□□□ 0.71
CNN1-210ENST00000592923 GSPT1P15170 499 aaKnown RBP19.48■□□□□ 0.71
CNN1-210ENST00000592923 PHKG2P15735 406 aa19.48■□□□□ 0.71
CNN1-210ENST00000592923 RTL5Q5HYW3 569 aaPredicted RBP19.48■□□□□ 0.71
CNN1-210ENST00000592923 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
CNN1-210ENST00000592923 C5P01031 1676 aa19.48■□□□□ 0.71
CNN1-210ENST00000592923 EIF5BO60841 1220 aaKnown RBP19.48■□□□□ 0.71
CNN1-210ENST00000592923 CDC45O75419 566 aa19.48■□□□□ 0.71
CNN1-210ENST00000592923 RBM25P49756 843 aaKnown RBP19.48■□□□□ 0.71
CNN1-210ENST00000592923 SRCIN1Q9C0H9 1055 aa19.48■□□□□ 0.71
CNN1-210ENST00000592923 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
CNN1-210ENST00000592923 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
CNN1-210ENST00000592923 TBC1D9Q6ZT07 1266 aa19.47■□□□□ 0.71
CNN1-210ENST00000592923 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
CNN1-210ENST00000592923 ADCY9O60503 1353 aa19.47■□□□□ 0.71
CNN1-210ENST00000592923 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
CNN1-210ENST00000592923 ATP8B2P98198 1209 aa19.46■□□□□ 0.71
CNN1-210ENST00000592923 DNAAF4Q8WXU2 420 aa19.46■□□□□ 0.71
CNN1-210ENST00000592923 SLC52A2Q9HAB3 445 aa19.46■□□□□ 0.71
CNN1-210ENST00000592923 IFNL2Q8IZJ0 200 aa19.46■□□□□ 0.71
CNN1-210ENST00000592923 SLAIN2Q9P270 581 aa19.46■□□□□ 0.71
CNN1-210ENST00000592923 LRRFIP2Q9Y608 721 aaKnown RBP19.46■□□□□ 0.71
CNN1-210ENST00000592923 IBTKQ9P2D0 1353 aaPredicted RBP19.45■□□□□ 0.7
CNN1-210ENST00000592923 BEND3Q5T5X7 828 aa19.44■□□□□ 0.7
CNN1-210ENST00000592923 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
CNN1-210ENST00000592923 SMARCA5O60264 1052 aaPredicted RBP19.44■□□□□ 0.7
CNN1-210ENST00000592923 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
CNN1-210ENST00000592923 OTUD7AQ8TE49 926 aaPredicted RBP19.44■□□□□ 0.7
CNN1-210ENST00000592923 TBC1D2Q9BYX2 928 aa19.44■□□□□ 0.7
CNN1-210ENST00000592923 COL5A2P05997 1499 aaPredicted RBP19.43■□□□□ 0.7
CNN1-210ENST00000592923 PNMA6EA0A0J9YXQ4 647 aa19.43■□□□□ 0.7
CNN1-210ENST00000592923 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
CNN1-210ENST00000592923 HSP90AB1P08238 724 aaKnown RBP19.43■□□□□ 0.7
CNN1-210ENST00000592923 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
CNN1-210ENST00000592923 OSBPL3Q9H4L5 887 aa19.43■□□□□ 0.7
CNN1-210ENST00000592923 DEKP35659 375 aaKnown RBP19.42■□□□□ 0.7
CNN1-210ENST00000592923 ZNF790Q6PG37 636 aa19.42■□□□□ 0.7
CNN1-210ENST00000592923 DCAF5Q96JK2 942 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms