RNA–Protein interactions for RNA: ENST00000592910.1

BLOC1S3-204, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

TSL 2

Gene BLOC1S3, Length 469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-204ENST00000592910 APAF1O14727 1248 aa28.52■■■□□ 2.16
BLOC1S3-204ENST00000592910 LMOD3Q0VAK6 560 aa28.52■■■□□ 2.16
BLOC1S3-204ENST00000592910 CAMKK2Q96RR4 588 aa28.52■■■□□ 2.16
BLOC1S3-204ENST00000592910 DCTN1Q14203 1278 aa28.51■■■□□ 2.15
BLOC1S3-204ENST00000592910 ADAMTS7Q9UKP4 1686 aa28.48■■■□□ 2.15
BLOC1S3-204ENST00000592910 TXNRD1Q16881 649 aa28.48■■■□□ 2.15
BLOC1S3-204ENST00000592910 ASAP1Q9ULH1 1129 aa28.48■■■□□ 2.15
BLOC1S3-204ENST00000592910 PALLDQ8WX93 1383 aa28.47■■■□□ 2.15
BLOC1S3-204ENST00000592910 ATG3Q9NT62 314 aa28.46■■■□□ 2.15
BLOC1S3-204ENST00000592910 RGPD3A6NKT7 1758 aaPredicted RBP28.46■■■□□ 2.15
BLOC1S3-204ENST00000592910 RGPD4Q7Z3J3 1758 aa28.46■■■□□ 2.15
BLOC1S3-204ENST00000592910 CEMIPQ8WUJ3 1361 aa28.46■■■□□ 2.15
BLOC1S3-204ENST00000592910 RBM42Q9BTD8 480 aaKnown RBP28.44■■■□□ 2.14
BLOC1S3-204ENST00000592910 MRC1P22897 1456 aa28.44■■■□□ 2.14
BLOC1S3-204ENST00000592910 SENP3-EIF4A1A0A087X0R7 540 aa28.43■■■□□ 2.14
BLOC1S3-204ENST00000592910 TTC5Q8N0Z6 440 aa28.43■■■□□ 2.14
BLOC1S3-204ENST00000592910 THUMPD2Q9BTF0 503 aaKnown RBP28.43■■■□□ 2.14
BLOC1S3-204ENST00000592910 CCNL1Q9UK58 526 aaPredicted RBP28.43■■■□□ 2.14
BLOC1S3-204ENST00000592910 BTBD11A6QL63 1104 aa28.42■■■□□ 2.14
BLOC1S3-204ENST00000592910 SLC39A6Q13433 755 aa28.42■■■□□ 2.14
BLOC1S3-204ENST00000592910 SLC27A3Q5K4L6 730 aa28.42■■■□□ 2.14
BLOC1S3-204ENST00000592910 LY75O60449 1722 aa28.41■■■□□ 2.14
BLOC1S3-204ENST00000592910 TAF7Q15545 349 aaPredicted RBP28.41■■■□□ 2.14
BLOC1S3-204ENST00000592910 PROM2Q8N271 834 aa28.41■■■□□ 2.14
BLOC1S3-204ENST00000592910 PTCD1O75127 700 aaKnown RBP28.39■■■□□ 2.14
BLOC1S3-204ENST00000592910 NBPF14Q5TI25 921 aa28.39■■■□□ 2.14
BLOC1S3-204ENST00000592910 TRIM35Q9UPQ4 493 aa28.39■■■□□ 2.14
BLOC1S3-204ENST00000592910 SIPA1L3O60292 1781 aaPredicted RBP28.39■■■□□ 2.13
BLOC1S3-204ENST00000592910 LOC102724428A0A0B4J2F2 783 aa28.38■■■□□ 2.13
BLOC1S3-204ENST00000592910 HMGB2P26583 209 aaKnown RBP28.38■■■□□ 2.13
BLOC1S3-204ENST00000592910 KCNQ4P56696 695 aa28.38■■■□□ 2.13
BLOC1S3-204ENST00000592910 SIK1P57059 783 aa28.38■■■□□ 2.13
BLOC1S3-204ENST00000592910 SALL2Q9Y467 1007 aaPredicted RBP28.38■■■□□ 2.13
BLOC1S3-204ENST00000592910 RREB1Q92766 1687 aa28.38■■■□□ 2.13
BLOC1S3-204ENST00000592910 ATP6V1AP38606 617 aa28.37■■■□□ 2.13
BLOC1S3-204ENST00000592910 ZNF790Q6PG37 636 aa28.36■■■□□ 2.13
BLOC1S3-204ENST00000592910 LRRC4BQ9NT99 713 aa28.35■■■□□ 2.13
BLOC1S3-204ENST00000592910 LAS1LQ9Y4W2 734 aaKnown RBP28.35■■■□□ 2.13
BLOC1S3-204ENST00000592910 CALD1Q05682 793 aaKnown RBP28.34■■■□□ 2.13
BLOC1S3-204ENST00000592910 MIS18AQ9NYP9 233 aa28.34■■■□□ 2.13
BLOC1S3-204ENST00000592910 NUP188Q5SRE5 1749 aa28.34■■■□□ 2.13
BLOC1S3-204ENST00000592910 STK32BQ9NY57 414 aa28.31■■■□□ 2.12
BLOC1S3-204ENST00000592910 TSPYL4Q9UJ04 414 aa28.31■■■□□ 2.12
BLOC1S3-204ENST00000592910 PAPPAQ13219 1627 aa28.31■■■□□ 2.12
BLOC1S3-204ENST00000592910 CCDC27Q2M243 656 aa28.3■■■□□ 2.12
BLOC1S3-204ENST00000592910 NCBP3Q53F19 620 aaKnown RBP28.3■■■□□ 2.12
BLOC1S3-204ENST00000592910 NGEFQ8N5V2 710 aa28.3■■■□□ 2.12
BLOC1S3-204ENST00000592910 FMNL2Q96PY5 1086 aa28.3■■■□□ 2.12
BLOC1S3-204ENST00000592910 KCNQ3O43525 872 aa28.29■■■□□ 2.12
BLOC1S3-204ENST00000592910 WWC1Q8IX03 1113 aa28.28■■■□□ 2.12
BLOC1S3-204ENST00000592910 ZNF496Q96IT1 587 aaPredicted RBP28.28■■■□□ 2.12
BLOC1S3-204ENST00000592910 SLC4A9Q96Q91 983 aa28.27■■■□□ 2.12
BLOC1S3-204ENST00000592910 BABAM1Q9NWV8 329 aa28.27■■■□□ 2.12
BLOC1S3-204ENST00000592910 TAF1LQ8IZX4 1826 aa28.27■■■□□ 2.12
BLOC1S3-204ENST00000592910 C5P01031 1676 aa28.26■■■□□ 2.12
BLOC1S3-204ENST00000592910 ITPK1Q13572 414 aa28.26■■■□□ 2.11
BLOC1S3-204ENST00000592910 UBR2Q8IWV8 1755 aa28.26■■■□□ 2.11
BLOC1S3-204ENST00000592910 GNAI1P63096 354 aa28.25■■■□□ 2.11
BLOC1S3-204ENST00000592910 VSIG10Q8N0Z9 540 aa28.25■■■□□ 2.11
BLOC1S3-204ENST00000592910 KCPQ6ZWJ8 1503 aa28.24■■■□□ 2.11
BLOC1S3-204ENST00000592910 SLC15A2Q16348 729 aa28.24■■■□□ 2.11
BLOC1S3-204ENST00000592910 LINC00116Q8NCU8 138 aa28.24■■■□□ 2.11
BLOC1S3-204ENST00000592910 AK7Q96M32 723 aa28.24■■■□□ 2.11
BLOC1S3-204ENST00000592910 CFAP44Q96MT7 982 aa28.24■■■□□ 2.11
BLOC1S3-204ENST00000592910 HEG1Q9ULI3 1381 aa28.24■■■□□ 2.11
BLOC1S3-204ENST00000592910 ZNF831Q5JPB2 1677 aa28.23■■■□□ 2.11
BLOC1S3-204ENST00000592910 R3HDM1Q15032 1099 aaKnown RBP28.23■■■□□ 2.11
BLOC1S3-204ENST00000592910 DNAJC10Q8IXB1 793 aa28.23■■■□□ 2.11
BLOC1S3-204ENST00000592910 TEX13AQ9BXU3 409 aaPredicted RBP28.23■■■□□ 2.11
BLOC1S3-204ENST00000592910 ANO8Q9HCE9 1232 aaPredicted RBP28.23■■■□□ 2.11
BLOC1S3-204ENST00000592910 TFCP2L1Q9NZI6 479 aa28.23■■■□□ 2.11
BLOC1S3-204ENST00000592910 KDM3BQ7LBC6 1761 aa28.23■■■□□ 2.11
BLOC1S3-204ENST00000592910 CHL1O00533 1208 aa28.22■■■□□ 2.11
BLOC1S3-204ENST00000592910 IFT57Q9NWB7 429 aa28.22■■■□□ 2.11
BLOC1S3-204ENST00000592910 PSDA5PKW4 1024 aaPredicted RBP28.21■■■□□ 2.11
BLOC1S3-204ENST00000592910 SNRPA1P09661 255 aaKnown RBP28.2■■■□□ 2.1
BLOC1S3-204ENST00000592910 EIF4A1P60842 406 aaKnown RBP28.2■■■□□ 2.1
BLOC1S3-204ENST00000592910 ZNF827Q17R98 1081 aa28.2■■■□□ 2.1
BLOC1S3-204ENST00000592910 WDR63Q8IWG1 891 aa28.2■■■□□ 2.1
BLOC1S3-204ENST00000592910 AKT1S1Q96B36 256 aa28.2■■■□□ 2.1
BLOC1S3-204ENST00000592910 C4BP0C0L5 1744 aa28.19■■■□□ 2.1
BLOC1S3-204ENST00000592910 STARD3NLO95772 234 aa28.19■■■□□ 2.1
BLOC1S3-204ENST00000592910 TJP1Q07157 1748 aa28.18■■■□□ 2.1
BLOC1S3-204ENST00000592910 MBIPQ9NS73 344 aa28.17■■■□□ 2.1
BLOC1S3-204ENST00000592910 IL16Q14005 1332 aa28.17■■■□□ 2.1
BLOC1S3-204ENST00000592910 COL5A3P25940 1745 aaPredicted RBP28.16■■■□□ 2.1
BLOC1S3-204ENST00000592910 GNPATO15228 680 aa28.16■■■□□ 2.1
BLOC1S3-204ENST00000592910 ZNF853P0CG23 659 aa28.16■■■□□ 2.1
BLOC1S3-204ENST00000592910 CRKLP46109 303 aaKnown RBP28.16■■■□□ 2.1
BLOC1S3-204ENST00000592910 RC3H1Q5TC82 1133 aaKnown RBP28.16■■■□□ 2.1
BLOC1S3-204ENST00000592910 CYP19A1P11511 503 aaPredicted RBP28.15■■■□□ 2.1
BLOC1S3-204ENST00000592910 CNTNAP4Q9C0A0 1308 aa28.15■■■□□ 2.1
BLOC1S3-204ENST00000592910 MSH5O43196 834 aa28.14■■■□□ 2.1
BLOC1S3-204ENST00000592910 CCDC87Q9NVE4 849 aa28.14■■■□□ 2.1
BLOC1S3-204ENST00000592910 RTCBQ9Y3I0 505 aaKnown RBP28.14■■■□□ 2.1
BLOC1S3-204ENST00000592910 CICQ96RK0 1608 aaPredicted RBP28.14■■■□□ 2.09
BLOC1S3-204ENST00000592910 PRAMEF22A3QJZ6 481 aa28.13■■■□□ 2.09
BLOC1S3-204ENST00000592910 HNRNPUQ00839 825 aaKnown RBP eCLIP28.13■■■□□ 2.09
BLOC1S3-204ENST00000592910 USP16Q9Y5T5 823 aa28.13■■■□□ 2.09
BLOC1S3-204ENST00000592910 GIGYF1O75420 1035 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms