RNA–Protein interactions for RNA: ENST00000592804.1

PTBP1-218, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-218ENST00000592804 COL5A3P25940 1745 aaPredicted RBP25.94■■□□□ 1.74
PTBP1-218ENST00000592804 ATG3Q9NT62 314 aa25.94■■□□□ 1.74
PTBP1-218ENST00000592804 UBR2Q8IWV8 1755 aa25.94■■□□□ 1.74
PTBP1-218ENST00000592804 C4BP0C0L5 1744 aa25.94■■□□□ 1.74
PTBP1-218ENST00000592804 NFATC2IPQ8NCF5 419 aa25.93■■□□□ 1.74
PTBP1-218ENST00000592804 UBR3Q6ZT12 1888 aa25.92■■□□□ 1.74
PTBP1-218ENST00000592804 GNAT3A8MTJ3 354 aa25.92■■□□□ 1.74
PTBP1-218ENST00000592804 PLEKHF1Q96S99 279 aa25.92■■□□□ 1.74
PTBP1-218ENST00000592804 STK32BQ9NY57 414 aa25.92■■□□□ 1.74
PTBP1-218ENST00000592804 SLC15A2Q16348 729 aa25.91■■□□□ 1.74
PTBP1-218ENST00000592804 SLC52A2Q9HAB3 445 aa25.91■■□□□ 1.74
PTBP1-218ENST00000592804 TJP1Q07157 1748 aa25.91■■□□□ 1.74
PTBP1-218ENST00000592804 LRP5O75197 1615 aa25.9■■□□□ 1.74
PTBP1-218ENST00000592804 ZNF827Q17R98 1081 aa25.9■■□□□ 1.74
PTBP1-218ENST00000592804 CICQ96RK0 1608 aaPredicted RBP25.88■■□□□ 1.73
PTBP1-218ENST00000592804 MYH14Q7Z406 1995 aaKnown RBP25.88■■□□□ 1.73
PTBP1-218ENST00000592804 ANP32CO43423 234 aa25.88■■□□□ 1.73
PTBP1-218ENST00000592804 IL17REQ8NFR9 667 aa25.88■■□□□ 1.73
PTBP1-218ENST00000592804 AKT1S1Q96B36 256 aa25.88■■□□□ 1.73
PTBP1-218ENST00000592804 LOC102724428A0A0B4J2F2 783 aa25.87■■□□□ 1.73
PTBP1-218ENST00000592804 SIK1P57059 783 aa25.87■■□□□ 1.73
PTBP1-218ENST00000592804 PNNQ9H307 717 aaKnown RBP25.86■■□□□ 1.73
PTBP1-218ENST00000592804 CEMIPQ8WUJ3 1361 aa25.85■■□□□ 1.73
PTBP1-218ENST00000592804 NEFMP07197 916 aa25.85■■□□□ 1.73
PTBP1-218ENST00000592804 WDR43Q15061 677 aaKnown RBP eCLIP25.85■■□□□ 1.73
PTBP1-218ENST00000592804 CCDC184Q52MB2 194 aa25.85■■□□□ 1.73
PTBP1-218ENST00000592804 PDGFDQ9GZP0 370 aaPredicted RBP25.84■■□□□ 1.73
PTBP1-218ENST00000592804 MAPK8IP3Q9UPT6 1336 aa25.84■■□□□ 1.73
PTBP1-218ENST00000592804 KCPQ6ZWJ8 1503 aa25.83■■□□□ 1.73
PTBP1-218ENST00000592804 SLC4A9Q96Q91 983 aa25.83■■□□□ 1.73
PTBP1-218ENST00000592804 RBM42Q9BTD8 480 aaKnown RBP25.83■■□□□ 1.73
PTBP1-218ENST00000592804 ATP6V1AP38606 617 aa25.82■■□□□ 1.72
PTBP1-218ENST00000592804 ITPK1Q13572 414 aa25.82■■□□□ 1.72
PTBP1-218ENST00000592804 ADAMTS8Q9UP79 889 aa25.82■■□□□ 1.72
PTBP1-218ENST00000592804 TEFQ10587 303 aa25.81■■□□□ 1.72
PTBP1-218ENST00000592804 SLC39A6Q13433 755 aa25.81■■□□□ 1.72
PTBP1-218ENST00000592804 NFE2L2Q16236 605 aa25.81■■□□□ 1.72
PTBP1-218ENST00000592804 MCM10Q7L590 875 aa25.81■■□□□ 1.72
PTBP1-218ENST00000592804 CCDC146Q8IYE0 955 aa25.81■■□□□ 1.72
PTBP1-218ENST00000592804 COL24A1Q17RW2 1714 aa25.8■■□□□ 1.72
PTBP1-218ENST00000592804 KDM3BQ7LBC6 1761 aa25.8■■□□□ 1.72
PTBP1-218ENST00000592804 DCTN1Q14203 1278 aa25.8■■□□□ 1.72
PTBP1-218ENST00000592804 LINC00116Q8NCU8 138 aa25.8■■□□□ 1.72
PTBP1-218ENST00000592804 RTF1Q92541 710 aaKnown RBP25.8■■□□□ 1.72
PTBP1-218ENST00000592804 PTCD1O75127 700 aaKnown RBP25.79■■□□□ 1.72
PTBP1-218ENST00000592804 HTATSF1O43719 755 aaKnown RBP25.78■■□□□ 1.72
PTBP1-218ENST00000592804 TFCP2L1Q9NZI6 479 aa25.78■■□□□ 1.72
PTBP1-218ENST00000592804 PNPLA7Q6ZV29 1317 aa25.78■■□□□ 1.72
PTBP1-218ENST00000592804 C4AP0C0L4 1744 aa25.75■■□□□ 1.71
PTBP1-218ENST00000592804 HMGB2P26583 209 aaKnown RBP25.75■■□□□ 1.71
PTBP1-218ENST00000592804 RUNDC1Q96C34 613 aa25.75■■□□□ 1.71
PTBP1-218ENST00000592804 AK7Q96M32 723 aa25.74■■□□□ 1.71
PTBP1-218ENST00000592804 TMPOP42166 694 aaKnown RBP25.73■■□□□ 1.71
PTBP1-218ENST00000592804 MRS2Q9HD23 443 aa25.73■■□□□ 1.71
PTBP1-218ENST00000592804 ZBTB7AO95365 584 aa25.72■■□□□ 1.71
PTBP1-218ENST00000592804 RIPK4P57078 832 aa25.72■■□□□ 1.71
PTBP1-218ENST00000592804 AMIGO3Q86WK7 504 aa25.72■■□□□ 1.71
PTBP1-218ENST00000592804 BTBD11A6QL63 1104 aa25.71■■□□□ 1.71
PTBP1-218ENST00000592804 ZNF790Q6PG37 636 aa25.71■■□□□ 1.71
PTBP1-218ENST00000592804 TTC5Q8N0Z6 440 aa25.71■■□□□ 1.71
PTBP1-218ENST00000592804 THUMPD2Q9BTF0 503 aaKnown RBP25.71■■□□□ 1.71
PTBP1-218ENST00000592804 RRP7AQ9Y3A4 280 aaKnown RBP25.71■■□□□ 1.71
PTBP1-218ENST00000592804 KCNQ3O43525 872 aa25.7■■□□□ 1.7
PTBP1-218ENST00000592804 SMIM5Q71RC9 77 aa25.7■■□□□ 1.7
PTBP1-218ENST00000592804 COL23A1Q86Y22 540 aaPredicted RBP25.7■■□□□ 1.7
PTBP1-218ENST00000592804 LAMB4A4D0S4 1761 aa25.69■■□□□ 1.7
PTBP1-218ENST00000592804 DNAJC10Q8IXB1 793 aa25.69■■□□□ 1.7
PTBP1-218ENST00000592804 SPON1Q9HCB6 807 aa25.69■■□□□ 1.7
PTBP1-218ENST00000592804 CNTNAP4Q9C0A0 1308 aa25.68■■□□□ 1.7
PTBP1-218ENST00000592804 GNPATO15228 680 aa25.68■■□□□ 1.7
PTBP1-218ENST00000592804 NEUROD2Q15784 382 aa25.68■■□□□ 1.7
PTBP1-218ENST00000592804 PNISRQ8TF01 805 aaKnown RBP25.68■■□□□ 1.7
PTBP1-218ENST00000592804 ZNF496Q96IT1 587 aaPredicted RBP25.68■■□□□ 1.7
PTBP1-218ENST00000592804 ATF5Q9Y2D1 282 aaPredicted RBP25.68■■□□□ 1.7
PTBP1-218ENST00000592804 PHF14O94880 888 aa25.67■■□□□ 1.7
PTBP1-218ENST00000592804 MTFR1LQ9H019 292 aa25.67■■□□□ 1.7
PTBP1-218ENST00000592804 MSH5O43196 834 aa25.66■■□□□ 1.7
PTBP1-218ENST00000592804 TAF7Q15545 349 aaPredicted RBP25.66■■□□□ 1.7
PTBP1-218ENST00000592804 RC3H1Q5TC82 1133 aaKnown RBP25.66■■□□□ 1.7
PTBP1-218ENST00000592804 VSIG10Q8N0Z9 540 aa25.66■■□□□ 1.7
PTBP1-218ENST00000592804 HEG1Q9ULI3 1381 aa25.66■■□□□ 1.7
PTBP1-218ENST00000592804 CRKLP46109 303 aaKnown RBP25.65■■□□□ 1.7
PTBP1-218ENST00000592804 FLAD1Q8NFF5 587 aa25.65■■□□□ 1.7
PTBP1-218ENST00000592804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.64■■□□□ 1.7
PTBP1-218ENST00000592804 SSFA2P28290 1259 aa25.64■■□□□ 1.7
PTBP1-218ENST00000592804 LMOD3Q0VAK6 560 aa25.64■■□□□ 1.7
PTBP1-218ENST00000592804 SLC16A10Q8TF71 515 aa25.64■■□□□ 1.7
PTBP1-218ENST00000592804 MIS18AQ9NYP9 233 aa25.64■■□□□ 1.7
PTBP1-218ENST00000592804 FMNL2Q96PY5 1086 aa25.63■■□□□ 1.69
PTBP1-218ENST00000592804 TRIM35Q9UPQ4 493 aa25.63■■□□□ 1.69
PTBP1-218ENST00000592804 APAF1O14727 1248 aa25.62■■□□□ 1.69
PTBP1-218ENST00000592804 CYP19A1P11511 503 aaPredicted RBP25.62■■□□□ 1.69
PTBP1-218ENST00000592804 PTGER2P43116 358 aa25.62■■□□□ 1.69
PTBP1-218ENST00000592804 RPS6KA4O75676 772 aa25.61■■□□□ 1.69
PTBP1-218ENST00000592804 INTS5Q6P9B9 1019 aaKnown RBP25.61■■□□□ 1.69
PTBP1-218ENST00000592804 SGIP1Q9BQI5 828 aa25.61■■□□□ 1.69
PTBP1-218ENST00000592804 RTCBQ9Y3I0 505 aaKnown RBP25.61■■□□□ 1.69
PTBP1-218ENST00000592804 CCDC87Q9NVE4 849 aa25.59■■□□□ 1.69
PTBP1-218ENST00000592804 PRAMEF22A3QJZ6 481 aa25.57■■□□□ 1.68
PTBP1-218ENST00000592804 TRAPPC3LQ5T215 181 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms